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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1157714..1165519- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039174 ID=XLOC_039174|Name=XLOC_039174|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7806bp|location=Sequence derived from alignment at sc0000044_pilon:1157714..1165519- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAAATAAAAGGTCGAAATCAAATTCAATACATATTGGTCGGAAG
TGTACCTACAGGCAATTTGAAGTTTTTGTTACATCGATTAAGAGGTTTAT
GTGAAGAAGCAGCCCTGCAGGACAAATACTTTGAAGACCATGAATCTGTG
TATGTTATGAAGGTGAGAAAATCTGTTGAAATTCTTGATTTTAGATTTTT
CTAGTTTTCTGTGTCACTTTTTTAATCAAAACAAAAAATCATAGAGTCAA
AATTTATTGAAAATCTAAGCTTGAGAAAAGAGAGACCTGTTGTATATTTT
TGGAAAGCTGTCAAAAAATTAAGATTAGAGATATATTGCGAGTACATATG
ATTTCTCTACCTAACTCAAGATCTTGAGCTTCAAAAAGTGCAAAAAGTGG
ACAAAATAGCTGTTTCTGGCTGAAAAACATTATTTTGAAGGGTCAATATC
TTGAGTTAGGTACAGAAATCACATATATTCGCAATATATCTCTAATCTTA
ATTTTTTGAGAGGTTTCCAAAAATATACCGGGTGCGCCACAAAAAAGTTT
CTCTCTTTAAAACTAATTTTCCCGAAATCTAAAAATTTTAAAAGAACCAT
TCCTATTCCATTGGAAAGAAGAAGTATAAACTTAAACTTTGATGGGTCAT
TTATTAAATTCGGTTCATTAGATCGAAAGTTATGCTCTATTGAATAAAAA
AGTTAATTTCTGAAAGTGCTCAAAAACGAAAAAATTGACCTATCAAATTA
AACAGAAGCATAATTATATAATGCATCAGTATTTTCGTTTCAGTCATTAA
AAATGATAATTAGCTGTCTAAATGACCTTTTGTTGTATAAAGGACGATTG
AATTTCAATAAAAGGCAGAAAATTCGTCGAAAAAAGCCAAAAAATCTGGT
AAAATTCATAAAAATACATCAAATATGGGTTTCGAGGTACATCCAGCCTT
ACATAGACTTTATCTAGTCTAGAACCAAATATCTGGAGGAAGATTTCGTT
AAAAGTAAATTGAAATGATTTTGATGAACATTTTAAACCCTTTCGTTCCA
CCAGTTTCGAAATTTATGTGTTTAGTTACTGAAAAATGGTCTTAATCATG
TAAAGCCTCTTGCGATTGCCAATTTTAAAATAAAGATTTGATAGGTCGAT
TTTTAACGTTTTCGGGCACTTTCTGAAAGTAAACTTTTTATTCAATTGAG
CACAACTTTTGATCTAATTTTGATTTGACTTTGATTCTAATTTAATCGAA
TTTCATAAATGACCCATCAAAATTTAAGTTTATCTTTCTTCTTTCCGATG
GAATAGGAATGGTTGTTTCTTAGTTCTTAGATTTCGAGAAAATCAGTTTC
AAAGAGAGAAACTTTTTTGTGGCGCACCCGGTACAATATGTCTCTCTTTC
TCAAGCTAAAATCTTTATTAAATTTTGACCCTATGATTTTTGCCTGCTGA
GACCGTCATATTTGTCCGAAAAACACACCAAAGTGTCCGAAAAAAATTGG
AACCTCTGTTATTTTGATTCCCTACCTCTTAGCTTTCCATAAATGTATAA
CAAGTGCTTTGACTAAAAAAGTCGAGCGACCTCAAAAGATCGAACAAATT
TCCCCCTACTAATTCTGACTTTCCTATTTATCCCAGCTCTAAAGATGGGT
GTCGGAGCTAGAAAAGGGATGTCGACATTAGCTTTCCATAAATGTATAAC
AAGTGCTTTGACTAAAAAAGTCGAGCGACCTCAAAAAATCGAACAAATTT
CCCCCTACTAATTCTGACTTTCCTATTTATCCCAGCTCTAAAGATGGGTG
TCGGAGCTAGAAAAGGGATGTCGACATTAGACTATCTTATGGTACCAATG
CATTGAATCTTATATCTTATTTAGTTTTGAGTTTATAATGATAACAATTC
TATTCGTCAGAACTTTATGAATGGTAGCACGTAGGAGACTCTTTATCCTT
ATCTCCACCACAAATATTCAACAGAAATTCGAATAGTAGATATCACGTAG
GAGACTCTACTACTACTACAAATACCTGATAGAAATTCGAAAACCCTTCG
CGTTCAATTTTGTTTTCCTTTTGTTTCAGGATTCATCAAATTCGTCGAAA
AATTTCCATCTTCGTGTACGAAGGTCGCTTATACAGTCAGATGCACCTCA
TCAATTGAGATACCTAGGTATGTGAGCATTTTATTTTTTGTCTTTGGTAC
TAACCTACTAAGAAAAGTTTTAAATTATCATAGTCGAGTCGTGGCCTAAT
GGAAGATACCAAAAATCTTTTGGGGAAAGCCTGCTTTTTCCAGGATTGGT
CAAGAATTTTAGTGGATTTCGGTTATATTTTTTAAAAGTTAATTTCTTTG
CTCTATAATTTCTCCAATCTTCCAAATGGAAAGTCAAAATTCAAAAACTC
TTTAAAAATATTTTTTTCAAGGGTTGATTAAAAGTGACGCCATCTAAATA
AGTCTCTCTAACCCATTTGGATATTCAGTCTTTCAGTCTAAACCTGTTAA
TTTAAAAATCTCGTCGTTAAACAAAAGAATCAATATTGCTCAAAACGTTA
TCCAGATCCAAATTCATGCACCTTTCCTTTTAACAATATTAACGAAATTG
TGCGTTAAAACATCTCATAAGGCGAAGTGGTATGGTGGTCGTCGCTCTCG
GCTCTCGCCTAAGCGTCCCGAGTTCGATTCCCACCGTGGTACTTCGACTC
ACTTGGTAAGCGAGTGTACCTTCGTCCGGGTCAACCGATAACATGTGAGG
AGAATAGGGTACCACAGGGTATCTGTATGTCGCGTACGATCAGCAACGAG
TAGAGCTTTAAAATTCCTACTCGTAAGTGAGGAAATGTTGCTCTGAAGGG
AGTAGGACCCACCCCGGTAATCCGGAGGTTTAATATCTCTATATATCTAC
ATTTCATATCTGATTCAAACATTGTTCAAAACCTCAATTATGTCACCGAC
AACGGTAACGGAAAATGCTCTAACCTTCGATGAAATTTGAATATGATTGT
TTTCGAGATCTAAGATTGTTTTCGTTGAAGATTTAGTGCTTGTGCATAAA
TTTATCATTATGATCTATAAGAAGTTACTTTACTCGTAGAAAACCACACA
ATAAATGCGAATGAATGAATTACAGCTTTAGTTGGTATTTTTTCCTTTTA
CAAAATATAGATGTTAACAAAGTATGAGATCTTTTTTTTTTCAAAAAGGT
GCTGATGTTTTTTTTCGGTAGGCCTTTCTCGAGATAGAATTCTTAGAAAC
GCAAACATGTACCTTTTTTTCTATGTAACATTGTAATCATATATCTTATC
AGAAATTATTTTGAAAAATAGTAATTTTGTTGCTATGCTTAGTTTCAAAG
AATGTCGATCTTTAATCATCATCTTAATCTCGAATACTCCCTTACTGGCC
CTTGTAAGGAAGAAAAATGAAAACTTAACTAAAATCGAAATTCTTGGCCC
GAGAAACTTAAAAAGCATTTTCCTTTCCTGAAAAAGCTATACATACAAAA
GAGCTCCATAACCAACAATTTTGGCACTGGTACATTTTAGTGATTTTTTT
ATGGTTTGCATTTTTATCTCGAGAATGGCCTTAGTGTCAACTGATGCCAT
TGAAGTACAAATACAGTATAGGTCTCATCCGGTCTGATTTTTGGTGGCGC
TCGTCCTCGGCATTCGATATGATGGTGGATTCTCTTTCGGCTTCATTGGG
TAGGTTGTCTTTATCAGCCAATCGTTCATTGTCAGAATTCTTAGCTCTCC
GGTCCACATCAGTTTTTACTGCCAGTATATATGAAATTGTATATAGTTTG
TATATATAGTTTTGTATATAGAACCTGACCTGTGTTGACAAATAAATTAA
TATAATAAAAAGATTAATAATGAAGACCGCGCCATATTGTCCATCATGGT
CTACACAAGAGTTTTTCTTTGTAAAAAACTTCTTCCTGAATGTCAAGTCA
CTCTGGCTTTCTACGTCGACCTTTAAGTCTATCTCCGTTTCGAAACACTC
ATTATTGGATTCGGACGTCCCAACGTGACTCACTTTTTTGTCTTCACCAC
CATTCAAGAAAAACACATCTGATGAATCTATTTCTTCTTCACACCCCTCC
TCTCCGAAAGCGATATTATCAATTTCAATCAATGGATTATTATATGATTC
TTCTTCGAGCACTAGTCCATTGTCTTCTTCAAAACTGGATGGCAATATTT
CATGGAGTCTTTCATCTCGGTCTGTCTCGTGAGCTTCTTCTCCTTCGATT
AATGGTTGATAATTCTCTAAGGCTTGTGTAAGTAATATATCCCCTTGCCG
TATCCGTTCCCTTTGTTCTTGCATCAGCTGGATCAAATAATTCCTTTCAG
CCATTAGATCTTCCAGCGGCATGGTATTGTACTGTTCGAGAACTACATAT
GTTGGAGTGCACAAACCTTTTTCGTAAAGAGGCGTGAACTCGTTAACAAC
GGTCTGCTCATATTCATAAAGATCGCTGTCCTGGTGGTGAGAAGTCATCG
CGAACTCGTACTCTATTATCGGTGCCTCCATCCTAAAAGGAAAAACCGCA
ATAGAAGTTTTCCATGTTTTTTAAGTTACGTAATTTCCGCCATTATGGAA
GAAAACGTTCGAACCGCGTAAGAGGTTGCCTCTACAGATTCGAATGTTTG
CTTCCATAATGGCGGAAATTACGCAAATTAACAAAAGTTGAAAAAAACCT
ATATATATGAACGGTCAATTGATCTTTTGCTAAAAACAGATTTTTCTCAT
CAAAATGATTTTTGTCTTGTAATGACAGTGAAATTTTAGCTAGTTTGCAA
ATTATCATTCAACTGAAAACAGACCTCGCATACCTTGGATGGAGAAACTC
TTCGAATTCGTCGAAATCGTCAACTATTGATAAACCAGGATAAACTTGCG
CGTTTGTGTGAAACTAACTTCCAAAACAATGTCTAGATGCGTATTGAACG
CCAATTTAAAAGTATTCGTTTTGTTGAAATTTTTAATTGACGTCAAAATG
AAAAATTTTTTAATTCGACGTCACACTTTTTCAAAAATCAAAAAGGCTTT
ACAAACGTTTCAAAATAAAAAGAAATTGCCTGGTCATCGTACCTATATAA
GCCTATTTTACAAAACAACCATAGGTAGATGTGAGTTAAAAGCCAAATAT
CTTAAGATATAACCATGTACTCTCAGCTGTCTAATAAACGCCCCCTAACG
CCTCTTTCTAAAAAGTACACCTTTTAGTCTATAATTACCTTATTTCGGAG
GTATTTAGATGTACAATTTCCAACCCCCACGATAATTAGCCCTCCCCCAC
CCCTATTTATTAAAATTGGAAGATTTTTCAAACACTAGAAACTGTACCTC
TAATCGAAAGTACTCTTTGAGATTCATTGCCGAAAAATATGTTTTCATCT
AATTCTTTCTGAAAGTCAGTATAAAATTTAGCATTAGTCGACCAAATTAG
ACAAATGACCCGATTTTGACCCGATCTTTTCAAGCTTTGAGACGGTAAAT
CAGTATTAATCAATAAAGAAGTTTAGAAAATTCTAAGAGTTTCTAGGTCT
AAAAATTTTTTTTTCTTTATTGAAACAAAGACACGTGTACACTACGACGA
ACATATATTACAAAACATTACTTAAACATAAAATAATATAGTCCCTCCCC
CCGCTAGGAACTAACGTTATATCGCCATAGGTACTAGACTATGTAAAAAA
TAAATAAATAAGTAAATTAGCAGGTAGTTACGTAAATACGAAGGGGCTAA
ATTGTTAATAATTCCATAGAAGAATGTCATTCTTCTAGCAAAGCGCCTGT
CAGCAAGACTTTCAAGACCAAGTTCTGAATATAGTTTTTCCTGAGACGTT
CCACGAAAACAGCCTGTTATAGCTAGACAGGCATTATATTGAATAGATTC
AAGCTTCTGCACAAAGGTAGCATTTCCTGGGCGGTCATATACGATATCAC
CATAATCTAGGCCTAAATGACCTTACTTTCTTCATTCAATGTTTAATAGC
ATTGAATCGCCAGCTTGGCAACTGATTTTGAAGTACCATGGGACCAAATA
GTGAGAAAATAAAACAAAAACCTATATATTTAACATATTAGGGCCAACCA
AGACCGCCCCCGGACCATTGGTACCTGAGAGTTATAGACTTGTTTTAACC
CCTTAAAGATTGACAAGAAATTTTGGCCTGTCTAGTTAGTACTTTACAGA
CCAGAATGTAAATTTGACCGCAGTCATGTATTGATTGATTGACTCGTTCT
ATTTGACTGAAATTCGTTCCTGAAGGCTGATTTGTCAAATGAAAGAGACT
AGTAACAGAACAAATCCGTTTCTATAAGTATTTGGTACTTTGCAGACCGG
TCTTTAAAATACACGTTGACCACCTGCTGGAACTCGGGAACTACTGGAGC
GTTGACGTGAAATCCCCCAAAGATGCTCGAAGGGTTAACTTAAAAGTTCA
ACTATACAGTTTCTTTGGCCGACACTGGATTGCTTGTTGATTTAATTTTT
TTTTTTTCTTTTTTTTTTTTTGTTATTGAAACATAAACACAGGGTACATT
ACGAACATATAATACAAAATACTACTAAACATTAATATAGTCCCTCCCTC
CGCCAGAAACTTAAGTTATATCGCCAGAGGTAAGGCTATGAAGAAAGGAA
AAAGTGAAACAAGGTGTGACGTGGAGAGAGCTATCGTTGTAGTAGACTAA
AATAACGCACCACTGAACCTTCCAGATTCATGGATATATTCAACGACAGA
AAGAATTATAGTTTGATTTAAAATTAAAGTCAAGCTTTCATCACCGTATA
ATAAAAACCGACAAAAATAAGAAGGGTTTAGTGGGAGGAAAATAATACCT
AAGTCTTGTAGTTTGTCGAATAGAGATTGTCTCGCATGGGAATATATAGA
GCAGTTCAGAAAAAAGTGCTGAGTATTTTCAACTGAGTTAGTTCGACAAC
CACAAAAAGGGTCTAAAGTATCACGAAAACCATGCCTAAATTTGTGCTCG
TTGAGATGGCTGAACCCTACCCGAAGTCGATTTAGAAAGACTACACCTTG
ATTGTCAGAAACATCAAAAACACGAGATTGTTTGGGTCTCAAAAATTCTA
AAATTGCATTCTTAAAGGTCTTAACAGAAGGTAGATCTCTTATATTCGCG
TCCAGGACATTCCACTGTGATATGCAGTAAGGAAAAAAAAGTATTACGAA
AACGCTCAGTTCGTATATTAAGAGGATAAATAGGATTTCTTGTTCTTATG
TTAACTGGCTCTGTAAGCCTTGCTGGCAGATAGTTACGTAAGTAAGATGG
AGCTTGGTTATTTATGATTTTATAGAAAAATATCATTCTTCTGGCAAAGC
GTCTGTCAGCAAGGCTTTCAAGGCCAAGTTCAGAGTATGTTCTCTCCTGA
GACGTTCCACGAAAGCAATTTGATTTAATTTCATTTGTATTTTTCAGGTA
CATCTGAGACTGGTGATAAAAGCCGTGCAGCATCTATGAGAAGTTGCATC
GAAGTCGATTGTACCGAAAACATACGAGCATTTCTTGAACATATTGGTTT
TCAATTCGATCATGAGACTATACTACGCGGTTATTTATTCAAAAAAGGTC
GCATGAAAATTTGCGTTTCAAGGCTACACAAGATTCCGGAGAAAGGTGTT
TTTCAAAATGCTATGCAAATGACTGATTCTTATTTAGTTGAAGTGACTTT
GAATACTTTAGTTCAACAAGACTCTTTATGTGAAGACATGAAGGCTTTCG
CTGAATACCTGAAACCCATTGTTGTTCTGGATAAACTTGATCAGAAACGT
CTATAA Coding sequence (CDS) from alignment at sc0000044_pilon:1157714..1165519- >XLOC_039174 ID=XLOC_039174|Name=XLOC_039174|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1218bp|location=Sequence derived from alignment at sc0000044_pilon:1157714..1165519- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAAATAAAAGGTCGAAATCAAATTCAATACATATTGGTCGGAAG
TGTACCTACAGGCAATTTGAAGTTTTTGTTACATCGATTAAGAGGTTTAT
GTGAAGAAGCAGCCCTGCAGGACAAATACTTTGAAGACCATGAATCTGTG
TATGTTATGAAGATGAATCAAATAAAAGGTCGAAATCAAATTCAATACAT
ATTGGTCGGAAGTGTACCTACAGGCAATTTGAAGTTTTTGTTACATCGAT
TAAGAGGTTTATGTGAAGAAGCAGCCCTGCAGGACAAATACTTTGAAGAC
CATGAATCTGTGTATGTTATGAAGGATTCATCAAATTCGTCGAAAAATTT
CCATCTTCGTGTACGAAGGTCGCTTATACAGTCAGATGCACCTCATCAAT
TGAGATACCTAGGATTCATCAAATTCGTCGAAAAATTTCCATCTTCGTGT
ACGAAGGTCGCTTATACAGTCAGATGCACCTCATCAATTGAGATACCTAG
GTACATCTGAGACTGGTGATAAAAGCCGTGCAGCATCTATGAGAAGTTGC
ATCGAAGTCGATTGTACCGAAAACATACGAGCATTTCTTGAACATATTGG
TTTTCAATTCGATCATGAGACTATACTACGCGGTTATTTATTCAAAAAAG
GTCGCATGAAAATTTGCGTTTCAAGGCTACACAAGATTCCGGAGAAAGGT
GTTTTTCAAAATGCTATGCAAATGACTGATTCTTATTTAGTTGAAGTGAC
TTTGAATACTTTAGTTCAACAAGACTCTTTATGTGAAGACATGAAGGCTT
TCGCTGAATACCTGAAACCCATTGTTGTTCTGGATAAACTTGATCAGAAA
CGTCTATAAGTACATCTGAGACTGGTGATAAAAGCCGTGCAGCATCTATG
AGAAGTTGCATCGAAGTCGATTGTACCGAAAACATACGAGCATTTCTTGA
ACATATTGGTTTTCAATTCGATCATGAGACTATACTACGCGGTTATTTAT
TCAAAAAAGGTCGCATGAAAATTTGCGTTTCAAGGCTACACAAGATTCCG
GAGAAAGGTGTTTTTCAAAATGCTATGCAAATGACTGATTCTTATTTAGT
TGAAGTGACTTTGAATACTTTAGTTCAACAAGACTCTTTATGTGAAGACA
TGAAGGCTTTCGCTGAATACCTGAAACCCATTGTTGTTCTGGATAAACTT
GATCAGAAACGTCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1157714..1165519 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 253-609:358 |
| Aaloc | 163-249:5728 |
| Aaloc | 1-162:7807 |
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