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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1051310..1054768- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039171 ID=XLOC_039171|Name=XLOC_039171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3459bp|location=Sequence derived from alignment at sc0000044_pilon:1051310..1054768- (Clytia hemisphaerica_ch_hm2_pilon)
CTAGGTTCATCAAAATCTGGATGGGAAAAGTTCTTCAAAGAAGCTGGTAT
TCCAGGGAAATTAGTTTCTGAGTAAGTAGAGGAAAATGAAGATGGTGAGG
AAAATCAGAATGTATTCTCTCTATGATGATTGAAAATAAAATCAATTTGA
TACATTTCTTTTTATTTTCGCAAATACAATGCTTATTACTTGAAAATAAA
CCCTTAATAAGTGGACTAGAGGTGGTTTTGAAAAGATTTTAGCGCCTGCA
GCGCGTATCAACCACCCACAATGGTTACCCCGAAGGCCAAAACTCAATTC
CTAAGTCAAAAAACGGCCAGTGAGCAAAGTGCTTGGAATTTTGCCTGACC
TAGTAGATTACCAGGCTATTCTATGGTAAATTATGACCCTGTCTATATAG
ATTTCAAATATAAAAGGTGCAAAATTTCACAGGGGTATATATTGTATTTG
AGCTCTTCTGCAAAATTTTAAGATTTTAACATTTGGAACTTTATTTTGCC
CAAATGACAATATTGGGAGTTTATGCCACTATACTAAAGTGACTTTCTTT
ATTGGTTTTAAAGCATACACATTAACCCTTCTTCCTATCATATTTTGGAA
TTTTAGTCTTTGAAATGACTTGGTAGATGCCACCAAAATCTACTAAATTC
ACGAGCTTTTTATCCCCAAGTAAAAGAATATAATACAAATAGAAAGGCCT
TGTTTAGCCTTGTGTTGAAATTTATTGATTATATTTTCTAGTTATGCAAA
TGTGTTTTGTGACAATCGAATGAGACTTGATATGCTAGAAGAACTAAACA
AGGTACCAACTTATATATTGATGGATTTAGATTGCGTTTGTAATAGTTTC
AAAGAATATTGTCAGCTTTAATTTACGTTAAATCTACTTTACAATGTATA
ATAATGTATAACTTAGTAAAAAGGTCTTTTGAAATTCTTTTTAGAAACCT
CATATAATTAGTTATGAGCTTAATGAAGTAGTTTCTTTTGGTGTTTTAGG
AGGTACTTCAAGAACTTGGAATCAAAGCTGTGGGAGATATCATTGCTATC
CTCAGATATTCCAAGATTAAACAAAAAGAGGTAACATTAACAGTGTAACA
TTAAATACCGCGGCTTATCTCGCAGGATAAAATCAAAACAATTATTCTGA
GAGATTTCATCACAAAGTGATTCTAATGCATAGCTTAAATTGATAAAATG
TAACGTTATTATAAACATTGCTGCATTTCTTTAAACGCAAGTTGAAAACT
ATTTCAATATATTTTTGAACATTAATCATCAATTTCCCCCAATTTTTTCA
GTTATCAAGGAACCGCTCACCATCTCCTGATGTAGAAGTTATTACTAAGA
AAGCAGTTCCCAAGGCAGCCACATCATCCAATAAGATGGCAGCTGCTGGT
CCTAGAATACCTCCAAAATCTTCTAATTGTAAGTCGGGTTTTCAGACAAA
TTTGAATTAAATCAGAGGGCGGGGGTCGTTACTAAAATCTGAGACATCAT
GTTGTTTAGTATTGAGGTGGTATACCGGAAAAAACTTTTCAGAAAATATG
GTCTCGAGAAAACATAATTTGTCCTGAGAAAAACAAAATTGGGTAGTCTC
TGTGTCAAAATGTCCCTAGAAAGTTTAGTACATGTGTACTAAAATACCAC
TTGTCTAAAGTGGGGTAAATTTTTAAAAACTTAATTTTAGTATACATATA
TGTCAGAGATTTTAGTACCCCCCCCCCCGATTAAATTTTGATTTCGAAAA
AGAAAGCAAAAACAACAATCATTTCTGCAGTACAAGCATTTTTATACAGT
ATCATGAATTATAATATCCAAGCAATAGGCTTGGGTTTAAAAATATTGAT
TGGTGGATAATTAACTCGAAATTTTGTGTTCTATCGCAAATCTTTAAGAT
TGATAATATTCTTTAATATTTTCTCTAGTATCGATGACAGTGAAAGCATC
AGACTCTACATCATCATCTAGCTCCAAAAGCAGCAGCACCAAAACAAATC
GAAAAACTTTATCGCAGCGTTTCAACGAATACGAGAAAGACGCAAAACAA
AAGAAAGTTGAAAATGAAGAACAAAAGGCTGAAGAGAAACAAACAATTAA
ACAAACAACATCGAATAGTATAAAAAGTAACACCACCACTGTGTTTACAA
TACAGTTGCCTTCCAAACCTCCATCCACTAAAACACAACCATTAGCTAAA
AATCAACCTGCAGTCAGCAAACCACAAGCTCAACAAACAGTTCGACCTCA
AAAAGTTACTCTAGTACCAGGTAATAAATGTATTTTTTTGTAAAGATAAC
AATGTCTCTTTTTGATCAAGAAATGGAAACCCCTGTGTGCAGTATCTCAA
GAAATCAAACATCTTTATTTCGCCATGAACGTTGTCAGGCAGTCTGCTGT
AACAATAGCTTTCTCCTGAATTTGATTTATTGTCCCAATTGAAAAGGAGC
TAAAATCAAGATTCTATACAACCAAGATAAGCCATAAAGTCTTAAAAAAA
AAACTACTGCTGTTAACAGTTAGCAGTTGACTCAATGTCACAAATTTTGT
GAGAAAAGTGTCTTATTCTATACGGAATCCATGATAATCATCGGGACCTA
TGATAACTTCTTTGTTCTATATAAAGCAAAAAAGGGGATCGACCATGGAA
TAGTAATTAACCAAAAATTCTTTCCATAGCGCAAGGAAAGACATTGAATC
GTAACAAGCAGTCGACATCAATTTTCGATCGATTGGATCGTCTCACTAAA
GGTTCGCAAGAAGCTTCTACTACTACAACGTCATCAACGTCAACGTCTAA
ACAAAAGACTGAGACGACAAAAAAGGTTTGATCATTTCTTCTGATCCGAT
GCTTGGTGTAAGATTGTTTAAATAAGATAGTTTCAGGTTTAGAATGGCAC
ATGCTATAACCTTTTCGGGAATCTATATTCTACATCTTCGTTTAGCAATT
CAGAAAATTAAGCCTGTCTCAAAAGTATGTTGGCACTTCCTTTTTTAACG
ATTTCTCAGCACCCATTTATGCTATGTTAAAAAGCTGTACACCATTGGAA
AGATATTTTCAAGGAAAATGATCTAAAAGATAAAAGAGTGAAAAATTGGA
AAAAGAAGAAAAGAAAAATTATGAAGATAAAAAAAGTGAAGATTTTTTCC
ACTGGTTCGAAAATCATGACATACCTTTTAGAATATTTGAACCTTGCTGA
TTTTAAATATGTGCTTGAAATTTTCGTATCTTTCTTAGAAAAAATTTACA
GCAATTTGAAATTGGTCCATCTTTGCTGTCTTTGATCGTTTCTTGCTGTT
TTAGGTGTAAAATGTTTCACATCTTCGTTCTTTCTCTCACAGACTGTTAC
AGTTGATCCCAAACAAGATGTGTTCAGTCGGTTAGGAACTTTACAAGATG
ATGAAGCAGAAGAATCTCCGCCTCCTAAAAATGTTTTCAGTCGGTTAGGA
GGAATGTAA Coding sequence (CDS) from alignment at sc0000044_pilon:1051310..1054768- >XLOC_039171 ID=XLOC_039171|Name=XLOC_039171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000044_pilon:1051310..1054768- (Clytia hemisphaerica_ch_hm2_pilon)
CTAGGTTCATCAAAATCTGGATGGGAAAAGTTCTTCAAAGAAGCTGGTAT
TCCAGGGAAATTAGTTTCTGACTAGGTTCATCAAAATCTGGATGGGAAAA
GTTCTTCAAAGAAGCTGGTATTCCAGGGAAATTAGTTTCTGATTATGCAA
ATGTGTTTTGTGACAATCGAATGAGACTTGATATGCTAGAAGAACTAAAC
AAGTTATGCAAATGTGTTTTGTGACAATCGAATGAGACTTGATATGCTAG
AAGAACTAAACAAGGAGGTACTTCAAGAACTTGGAATCAAAGCTGTGGGA
GATATCATTGCTATCCTCAGATATTCCAAGATTAAACAAAAAGAGGAGGT
ACTTCAAGAACTTGGAATCAAAGCTGTGGGAGATATCATTGCTATCCTCA
GATATTCCAAGATTAAACAAAAAGAGTTATCAAGGAACCGCTCACCATCT
CCTGATGTAGAAGTTATTACTAAGAAAGCAGTTCCCAAGGCAGCCACATC
ATCCAATAAGATGGCAGCTGCTGGTCCTAGAATACCTCCAAAATCTTCTA
ATTTTATCAAGGAACCGCTCACCATCTCCTGATGTAGAAGTTATTACTAA
GAAAGCAGTTCCCAAGGCAGCCACATCATCCAATAAGATGGCAGCTGCTG
GTCCTAGAATACCTCCAAAATCTTCTAATTTATCGATGACAGTGAAAGCA
TCAGACTCTACATCATCATCTAGCTCCAAAAGCAGCAGCACCAAAACAAA
TCGAAAAACTTTATCGCAGCGTTTCAACGAATACGAGAAAGACGCAAAAC
AAAAGAAAGTTGAAAATGAAGAACAAAAGGCTGAAGAGAAACAAACAATT
AAACAAACAACATCGAATAGTATAAAAAGTAACACCACCACTGTGTTTAC
AATACAGTTGCCTTCCAAACCTCCATCCACTAAAACACAACCATTAGCTA
AAAATCAACCTGCAGTCAGCAAACCACAAGCTCAACAAACAGTTCGACCT
CAAAAAGTTACTCTAGTACCAGTATCGATGACAGTGAAAGCATCAGACTC
TACATCATCATCTAGCTCCAAAAGCAGCAGCACCAAAACAAATCGAAAAA
CTTTATCGCAGCGTTTCAACGAATACGAGAAAGACGCAAAACAAAAGAAA
GTTGAAAATGAAGAACAAAAGGCTGAAGAGAAACAAACAATTAAACAAAC
AACATCGAATAGTATAAAAAGTAACACCACCACTGTGTTTACAATACAGT
TGCCTTCCAAACCTCCATCCACTAAAACACAACCATTAGCTAAAAATCAA
CCTGCAGTCAGCAAACCACAAGCTCAACAAACAGTTCGACCTCAAAAAGT
TACTCTAGTACCAGCGCAAGGAAAGACATTGAATCGTAACAAGCAGTCGA
CATCAATTTTCGATCGATTGGATCGTCTCACTAAAGGTTCGCAAGAAGCT
TCTACTACTACAACGTCATCAACGTCAACGTCTAAACAAAAGACTGAGAC
GACAAAAAAGCGCAAGGAAAGACATTGAATCGTAACAAGCAGTCGACATC
AATTTTCGATCGATTGGATCGTCTCACTAAAGGTTCGCAAGAAGCTTCTA
CTACTACAACGTCATCAACGTCAACGTCTAAACAAAAGACTGAGACGACA
AAAAAGACTGTTACAGTTGATCCCAAACAAGATGTGTTCAGTCGGTTAGG
AACTTTACAAGATGATGAAGCAGAAGAATCTCCGCCTCCTAAAAATGTTT
TCAGTCGGTTAGGAGGAATGTAAACTGTTACAGTTGATCCCAAACAAGAT
GTGTTCAGTCGGTTAGGAACTTTACAAGATGATGAAGCAGAAGAATCTCC
GCCTCCTAAAAATGTTTTCAGTCGGTTAGGAGGAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1051310..1054768 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 829-945:118 |
| Aaloc | 685-828:779 |
| Aaloc | 343-681:1530 |
| Aaloc | 214-339:2159 |
| Aaloc | 133-213:2461 |
| Aaloc | 73-132:2718 |
| Aaloc | 1-69:3460 |
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