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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:1085266..1087388+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039167 ID=XLOC_039167|Name=XLOC_039167|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2123bp|location=Sequence derived from alignment at sc0000044_pilon:1085266..1087388+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcgTTTATGGCTGGTAGTGTTAAAAGTTTAATCGAGTTCAAGATTAA
AACTCGCCACGATGGATACTCAGATCAAGTCTCCCGAATCATGGTCACTA
AACTTTTCATAGTGGCAAGTCTTATAATGGGTGTTGACTGGTTCCACGAT
AACCTCTCATGTGTCCATCCAAAAGATATCGATGTTGGAGGCGAGTATAT
AGAAAGTGCTTGTTGGATCAAAGGATTTTACATATATAGAGAACATGAGC
CACATCACCGGGAGTCCGGATATTACGGGATACCGAACTCGTTATCGATG
GACGGGATGCGCCCCGCTTCCGATCGATTTGATGACGATGAATTTTGTAG
CACTAAGGAAAGTAACAATAACAAACGGAAATATTATAAGACACAATCGA
CTTGTCAGAAAATGGATAAATATTATTTTGTTCACTACCAATGGATGCCC
TTCTACATATTCAGTATGTCGGCTTTATTTTATATGCCGTATATTTTGTT
CCGTATGGTCAATACTGATGTCATCAGTTTGAAGTTGAACATGAAAGACG
ACGAGgtgggtgtttttttttctcgtagGGGCTAGGCGAGATGGGTCCCG
AGTATGTAGGATACGAGTTTTAAAGACTGAAAATCGACGAAAATCgacga
aatatttttaggtaAACTTTTGCAAAGGGCCTCAAAAACGAAAAGAATCT
TTCTCTTAAATAGTCGGTTTTTGTTTATCACCCCGTTTTCTtgtaaacct
agtaccccctggTCCGTAGTATGCGGCAACTATATTGGAAAAAGGCCGCG
TCCGTACCTTCTGATTCCCACTAGCTTCGTCTAATTCTGGTTTATATACA
ACTGCCATATTGTAAGGCTAAATGTAAATGTGCAAGTCACTGCAGTTTAA
AAGCGACCTATTATTTTTGGGGGTATTATTTTTGCGAGGTGATGGGAAGG
TTTGAGCCAAAGTTCGAacatcgaccctttgagagactgaatttcgaaaa
ttttgccCTATTTTTGACGTTTCTAccaccctttgagagactttttttcc
caatttttattcaaaatttcaaattttggtccAGACTATGAAATTTTATA
ACCCTTTGAGGGACATGATACTGTTAATATTTCGTGGTTTTGTGACCCTT
TCAGACTAATTTGCTATATTATAGTTTTAtaccctttcagagacttttGA
GGATGTAAAAAGGTGTCGGGTATGTGAACCCTTTTGGGTTCACATACCCG
ACACCTATTTTGCACTCCCCCTTCCCGGGGATAGTGGCACTTGTCAGGTT
TTAGGAATTTAAAATAACAGATCTCCCGAATTTTTAAAGAATCCGGCTTA
TTAAAATCCTAAATCTCAATCATCAGGTCACGTGTGACGATATCGTGgaa
ttttatttcaatcatGACGTCAATCCCGTCTACAAAATGCGTTACCGCTT
CTTCATGAATTTCGTGGTCAAAGTCATTTACCTTATCACGAACATCTCTG
CTTTTTACATCCTTGACGAGTTATTGGATTACCATTTCCAGTCATACGGT
CTCGATTGGATTAATTGGTCTTACCAGAACACGACATTGCGTTATGACTA
CGAGAGGAGATTGGCGCCGACGCCCGGTAATCGTATGTTACCTTCATTCG
GTATGTGTGATCTTGTCATTTCACGCTTAGACGTCAAAGTCGATAGCGTT
GATAAGATAACCGTTTTATGTGAAATCTCATCCAATATTTTATACCAATA
TGTATTCGTGGCACTCTGGTATGTTTTGATTATCTCAATCAGCGTGGCTG
CCCTCGGAGTCATTGTCTATCTTCAACAGCACATCCATGTCGcgtttttc
atcaaaaacgAGCGTTCTTCAAAATACGTATACAAACTGTTAACATTCCG
CGAATGTCAATATTTAGAATTTATCCGTAACCGTGATTTGACTATGTATG
GTATTATCGTTAAAAAGTTACGTCAAAAGCATTCATTACCGTTACCGAAA
CTACGTAAAATGGCGAACAAGGAAGGAGGAGCGACGGCACCGATTTTACC
GAATGGGAATACGGTGAAAGTGAAACATCATTTGAAACATTTGGATTCTA
TGGAAGACGGAGATTCGTCGTAA Coding sequence (CDS) from alignment at sc0000044_pilon:1085266..1087388+ >XLOC_039167 ID=XLOC_039167|Name=XLOC_039167|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2604bp|location=Sequence derived from alignment at sc0000044_pilon:1085266..1087388+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcgTTTATGGCTGGTAGTGTTAAAAGTTTAATCGAGTTCAAGATTAA
AACTCGCCACGATGGATACTCAGATCAAGTCTCCCGAATCATGGTCACTA
AACTTTTCATAGTGGCAAGTCTTATAATGGGTGTTGACTGGTTCCACGAT
AACCTCTCATGTGTCCATCCAAAAGATATCGATGTTGGAGGCGAGTATAT
AGAAAGTGCTTGTTGGATCAAAGGATTTTACATATATAGAGAACATGAGC
CACATCACCGGGAGTCCGGATATTACGGGATACCGAACTCGTTATCGATG
GACGGGATGCGCCCCGCTTCCGATCGATTTGATGACGATGAATTTTGTAG
CACTAAGGAAAGTAACAATAACAAACGGAAATATTATAAGACACAATCGA
CTTGTCAGAAAATGGATAAATATTATTTTGTTCACTACCAATGGATGCCC
TTCTACATATTCAGTATGTCGGCTTTATTTTATATGCCGTATATTTTGTT
CCGTATGGTCAATACTGATGTCATCAGTTTGAAGTTGAACATGAAAGACG
ACGAGatggcgTTTATGGCTGGTAGTGTTAAAAGTTTAATCGAGTTCAAG
ATTAAAACTCGCCACGATGGATACTCAGATCAAGTCTCCCGAATCATGGT
CACTAAACTTTTCATAGTGGCAAGTCTTATAATGGGTGTTGACTGGTTCC
ACGATAACCTCTCATGTGTCCATCCAAAAGATATCGATGTTGGAGGCGAG
TATATAGAAAGTGCTTGTTGGATCAAAGGATTTTACATATATAGAGAACA
TGAGCCACATCACCGGGAGTCCGGATATTACGGGATACCGAACTCGTTAT
CGATGGACGGGATGCGCCCCGCTTCCGATCGATTTGATGACGATGAATTT
TGTAGCACTAAGGAAAGTAACAATAACAAACGGAAATATTATAAGACACA
ATCGACTTGTCAGAAAATGGATAAATATTATTTTGTTCACTACCAATGGA
TGCCCTTCTACATATTCAGTATGTCGGCTTTATTTTATATGCCGTATATT
TTGTTCCGTATGGTCAATACTGATGTCATCAGTTTGAAGTTGAACATGAA
AGACGACGAGGTCACGTGTGACGATATCGTGgaattttatttcaatcatG
ACGTCAATCCCGTCTACAAAATGCGTTACCGCTTCTTCATGAATTTCGTG
GTCAAAGTCATTTACCTTATCACGAACATCTCTGCTTTTTACATCCTTGA
CGAGTTATTGGATTACCATTTCCAGTCATACGGTCTCGATTGGATTAATT
GGTCTTACCAGAACACGACATTGCGTTATGACTACGAGAGGAGATTGGCG
CCGACGCCCGGTAATCGTATGTTACCTTCATTCGGTATGTGTGATCTTGT
CATTTCACGCTTAGACGTCAAAGTCGATAGCGTTGATAAGATAACCGTTT
TATGTGAAATCTCATCCAATATTTTATACCAATATGTATTCGTGGCACTC
TGGTATGTTTTGATTATCTCAATCAGCGTGGCTGCCCTCGGAGTCATTGT
CTATCTTCAACAGCACATCCATGTCGcgtttttcatcaaaaacgAGCGTT
CTTCAAAATACGTATACAAACTGTTAACATTCCGCGAATGTCAATATTTA
GAATTTATCCGTAACCGTGATTTGACTATGTATGGTATTATCGTTAAAAA
GTTACGTCAAAAGCATTCATTACCGTTACCGAAACTACGTAAAATGGCGA
ACAAGGAAGGAGGAGCGACGGCACCGATTTTACCGAATGGGAATACGGTG
AAAGTGAAACATCATTTGAAACATTTGGATTCTATGGAAGACGGAGATTC
GTCGTAAGTCACGTGTGACGATATCGTGgaattttatttcaatcatGACG
TCAATCCCGTCTACAAAATGCGTTACCGCTTCTTCATGAATTTCGTGGTC
AAAGTCATTTACCTTATCACGAACATCTCTGCTTTTTACATCCTTGACGA
GTTATTGGATTACCATTTCCAGTCATACGGTCTCGATTGGATTAATTGGT
CTTACCAGAACACGACATTGCGTTATGACTACGAGAGGAGATTGGCGCCG
ACGCCCGGTAATCGTATGTTACCTTCATTCGGTATGTGTGATCTTGTCAT
TTCACGCTTAGACGTCAAAGTCGATAGCGTTGATAAGATAACCGTTTTAT
GTGAAATCTCATCCAATATTTTATACCAATATGTATTCGTGGCACTCTGG
TATGTTTTGATTATCTCAATCAGCGTGGCTGCCCTCGGAGTCATTGTCTA
TCTTCAACAGCACATCCATGTCGcgtttttcatcaaaaacgAGCGTTCTT
CAAAATACGTATACAAACTGTTAACATTCCGCGAATGTCAATATTTAGAA
TTTATCCGTAACCGTGATTTGACTATGTATGGTATTATCGTTAAAAAGTT
ACGTCAAAAGCATTCATTACCGTTACCGAAACTACGTAAAATGGCGAACA
AGGAAGGAGGAGCGACGGCACCGATTTTACCGAATGGGAATACGGTGAAA
GTGAAACATCATTTGAAACATTTGGATTCTATGGAAGACGGAGATTCGTC
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:1085266..1087388 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 556-1302:1377 |
| Aaloc | 1-555:1 |
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