XLOC_039163 (mRNA) -

Overview
NameXLOC_039163
Unique NameXLOC_039163
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000348_pilon:158933..159874+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039163 ID=XLOC_039163|Name=XLOC_039163|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=942bp|location=Sequence derived from alignment at sc0000348_pilon:158933..159874+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAAAAAGAGAACTTGGCAGTTTGTCTGAGCAAGCttacaatcaatcaat caaatttaatgataaaaatgataaagatGATGCACATGAAGAAAATGGCA ATGACAATGATCCACAAAcaactcaaatcaaatcaaattctataagaagt aaataaaaactctaaagtttttaatttgttGTAGTAAAGTTTATTATTGC ACCATTTTTAAAATAGACCTTAGTCCTCTTTTGTGCTAAATTGTAGGGGA TGAGGTAGGTctcaaggaaaaaaaaaaacaataagggGGTCACAAATAAA GTGCTGTTGGCACGACTATCTGAAAATACTTGGATAATGAAGGTTTTTGG CACTTCGTAgcacaaaaatcataaaataggtGTCGTTATTAAGTGAAGTT GGGGGTTAAAATATTGCCAAAATATGCTGAGTACGAGTTTTCTTGGCTGA GGGTTACATTTGGGAGTATTATGTTTATTGTATATCACTTTTTATATTAG GTCACAAGATTCCTAAACATCGAGTGTCAGAAGATCTGGTTAATTGGTTG GATAAAGTTCGAGGTATATATCAACAATGAAGCTTTTTGTCTTTACCTAT CAACCTCAACTCTTTTGATTTCCAtgtgtttcaattttttaaatgctTAA ATTAAAAGGGTTGTGTGAAAATGCTTAATCGACCATCAAAGGGTTGTTTT TTCCTTTATATCCCGAAAATTAGGTACAATAACTCTTTATGACTTAATGT CCAATTTGACGCAAAATAGGCAAAACCTTTGAGTacaatgttgaaaattt gaaaaattgtaatttttaacaaatttttctagaaaatcCAAATGAATATT TAAGTCATGAAATTCCAAGAAGAGAAATCATTACTGACGATGAAATTGAT TTAGAGTCATTCCAATACGACATGAATCAAACCTTACAGGGT

Coding sequence (CDS) from alignment at sc0000348_pilon:158933..159874+

>XLOC_039163 ID=XLOC_039163|Name=XLOC_039163|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=642bp|location=Sequence derived from alignment at sc0000348_pilon:158933..159874+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAAAAAGAGAACTTGGCAGTTTGTCTGAGCAAGCttacaatcaatcaat
caaatttaatgataaaaatgataaagatGATGCACATGAAGAAAATGGCA
ATGACAATGATCCACAAAcaactcaaatcaaatcaaattctataagaaTT
AAAAAGAGAACTTGGCAGTTTGTCTGAGCAAGCttacaatcaatcaatca
aatttaatgataaaaatgataaagatGATGCACATGAAGAAAATGGCAAT
GACAATGATCCACAAAcaactcaaatcaaatcaaattctataagaaGTCA
CAAGATTCCTAAACATCGAGTGTCAGAAGATCTGGTTAATTGGTTGGATA
AAGTTCGAGGTCACAAGATTCCTAAACATCGAGTGTCAGAAGATCTGGTT
AATTGGTTGGATAAAGTTCGAGaaaatcCAAATGAATATTTAAGTCATGA
AATTCCAAGAAGAGAAATCATTACTGACGATGAAATTGATTTAGAGTCAT
TCCAATACGACATGAATCAAACCTTACAGGGTaaaatcCAAATGAATATT
TAAGTCATGAAATTCCAAGAAGAGAAATCATTACTGACGATGAAATTGAT
TTAGAGTCATTCCAATACGACATGAATCAAACCTTACAGGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039163XLOC_039163-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348_pilongenomesc0000348_pilon:158933..159874 +
Properties
Property NameValue
Aaloc214-321:835
Aaloc151-210:503
Aaloc1-147:1