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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:152220..158412+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039162 ID=XLOC_039162|Name=XLOC_039162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6193bp|location=Sequence derived from alignment at sc0000348_pilon:152220..158412+ (Clytia hemisphaerica_ch_hm2_pilon)
aacaaaataaaaataatcaaaatgataAATGAATATGTTATTGAAAACCA
GAATACGTTCTATAAACCattggaaaaaaagaagaaacttcAACTTTTCT
GTGAAGTTGTCATGAAAATCATTGGTTATATTGAAAAGGCAAATGAAAAA
GTCAAATCTTGGGTTTTGATGTGTACCTACAAAAATGAACATCTTGTTGT
TGAAACAAAGTGAGTGAGATTTTCCACATTTTTTCCTTTATACTTTATTG
ACCCCCTTTTTGATTTATGTATAACACAATTATTTTAATCAAGTCAGTGA
TTCTACAAAGTTAGTAATTAAATGTAGGagttttttatgcatttttgcat
ataggttttcactgcctttttattgcttttagttttGAATAAGATGAGTT
TTAGTATCCTAAACTTTCATAATAAATAACTGAAATAGACCAATACTAGA
TAACACTTCCAGTAGCTctaatttgttttccttttttattttactttaat
cTTCAGCTGGTATGTCCTTTTCCCTCATtatagaaaaacattttaacaaa
aatgaTTATTTGTATATATGCTTCATTTTTTAGGACAATCATATtggatt
ttgatgtttttactgCTAGTCCATTGGTTTTTGAGAAACGACTTACCTCT
GCTGTCGGTTATTCGGTGTCTGTAGGATCTGGAGTACAATCCAAAGATAT
CAAGGACTATAAGTTCTTTCTTCAAAGCCAATACACAGAACCTATACCAT
ATACGCTGATAGAAAAAGTTGGTTTTATTGGAAAAGGGACTTGGTTTTTA
AACGAAAAAGTAAGTTATTAAGTTATTCTTTCCATCTCGAACgattttta
ggttaaaattagcattatttttattcataacaTAAGTCAAATGTAATAGA
TATTTTACTCGCATCCTAATACCCATTTTTTGACCAAACCACGTTCCCAG
CGACTTCTAACTGCTCTAAATCGACTCGTTCTATTTTTCAACTCCTCGCT
ACTGtattaaaaataatctttatcTGGAATAAGGAGATCACTTGGTGTGA
GCAAACAAGTAACATTTTGAAAcagaagatttttcatttaaaagaaCTTA
AATTTCCTTCTGGTACAGAGAATGttggaaatttcttttctttagttagg
caattacttttttattttctggtttacagattcgccacattttttttttc
aaaattaaaataaaataaaactgaaattcccaaaactttatttatttttg
acctTCGGACCCTGTCTGATCTGCCatgaaaaggaatttttttaggaaac
ttcattttataagagcatAAAAGGAGATGAAAGGGTACGGCCTTCTCTTT
TTCCCATTGATTTTCTTGTGTGTATAAACATTCTTCAAAACATTCTAAAT
TTTCTCCAACATTAAagtttcaaaatgacaattttttttttccatcctcc
cgTCCAACTCCAAATTTCTGTAaaccagaagaaaaaaaatacttgccTAG
TGTGCATCCTCCTACAGTGAAGCCcagaaaagaaatttattaaGACATAA
TAAGAATCCTCCAAATGTTTagggaaaacaaaaaagagtaTGCTTATTAT
CAACGACTTTACATCTACTGCAGATTTCTTACtaatagttttattttgtt
atttctaTTTAGACAGACTTGGTCAAGGCAGGATTCGAAAAATcagatga
aaaatttattcttggAGACCAAAATAAATTCAAGCACTTGTGTCTAGACG
TAGATAGTTCCTtgtttaaaaaggaaaattgtaTCGAAATCAATAAGAAG
TAAGAAAAATTGTTATGGTCTTAAAGAGGTCATGAATAAAATTTAATTAT
TGCTGTTCCCAGGAAGAAAAATTTAGGGCTTTTAATAGCTTTTTGAATAT
GGGGCACAGCTAGAATGGGCCAAACCAGATTAGACatgtaaaaaatctaa
aattctgCCAAACATATActtcatttttgaatttcctTAGGATATACGAG
CTGTTAGAAGGATTTGGAACAAACCAATGGAATGCAGAATTTTGCTTTGC
TTTCATTTTATCAAGATTGCTACTGGCTGGTTCTCCTGCCTCATTGGATT
CAGGTATTTGAATCATATTTGAAAAGTAGACCTACCTGGAGGACCtgtaa
attaacccttgtccgtctGTCtcttaccagcttttctcgagattggctca
ttagttttttctgacttttgacACAAGATGCAAAATTGTAATGCCCACAA
AATGTGACGGAccctgatttaaaaaaaaaaatattttccgtcCAAAATGT
CAGAAAAACTGGCTTTTAGGCTGATTCATTAATTGCAACAATGgatcaaa
ttttggaaattaagTCTCGATTGTTGATAAactatttctgatatttttgt
caaattttgatgaccttttgttgttatttttttcagtccCTATACTTCTG
TTCTATATTTATCATTAGGTGGGTCCAAAAAATGCATTGTgcttatttat
cagatttttaagTCCTTCAAAAACAATGTTGAACTTCCAGTTTATACAGG
CTCTAATGCTTTTTTCAATCCTTCTAGGCGAGAGCAATGTTCTTCTCCTT
CATTCTGGTTCCGAGGTAAGGAACGTTGGAAAGACATTGCTTCAGAAGCA
TATAACCTTTGGACAAGGAGCAAGTCTCCAACACAAATTAATTGTATCTG
GTGGGAGTGGATCTTCTTCTGGGACAAGCAGGTATAATGCTTTTAATGAC
ATACATTGAGCAAAAACAGTCTATAGAGTGCTCAAGAAAAGGAATTAACT
ATGAATTGCTACAGTGTTTCATGCTATGTAATTGTTGGGCAATTCGGTTG
TGTATTTTCTtgcaataaaaactaaaaaacaacaGCAACCGAATTGCCTG
ATTTTtaaattgaagatttatttaATTTTGGATGGCAAAAcaaaataagt
ttttgaaactctaaattttgaactcatttttaaatctttatcaAAAAGAT
GAGATTAATTAGAACTTTGGATTGCTAGACACTCAGTCCTTAATGGTATA
TATAAACCGTATTTCATTTTAGTCGTTCCCTTCAAGAAATTTGCAACTCG
TCATCAATGGTTCTGTGTGTAAACGAAACAAAGAATGGAGACAGTCAATC
GGAAATGCTTATCCATTTGCACGAGAGATTTTTCCAAGGCACCAAAACTG
GAGGTCTGGAATGTTCGGATTGTTCAGGGATCGTCCTGTCATCCAATTAT
AAAGAACCGCAAAGgtaaagaaagaaattggcaAAAGTTTGATTACACCC
TAAAAGtcagatttgaaaagaaaaagaataaataaattaaatattGTATA
CCTTTAGGGAGATATATAAGTTCGCAAGTTCTTCTGTTAATTTGTGAAAA
CTTTATAGACCTTTGGAAATATTATAATCCtcacaaaaattaagtttttt
agacatttgtaattttaagggtttttagacatagttttcttttgttttca
aaaaaataagcccaCTTCTCACAAAATTTAATCCTTGCGAAAGTTTACAT
TTCCCGTCCTTGCGAAAGTAAGTccaacaaaaatttaatttaccatgaaa
aaattgaatttgccATGAAAAGATTGCCTCGCGAAAATAACTTACCAAAA
AATTATTCCCCTTAAAGCCATAATAACAATATGTTATCGAGGTCTGGATT
GctgtttcaaaaaatgttttaaacccattatcaaaaaattgttcaacTAA
ACAATAGAATATCCTCtttctaaaattacattttcacGACCCGAAAGTTT
gcaatgttttgactttttagagATGAATAAGAATTAGAATGAATTGTCTG
TGTTTTTAATACATAAGTGCGagtaatattttgtttttgcaaaaTAAGCA
AAGAGCCTCATGGATGTATAAATTGGCTTTAAGGTAGTAATTTTAGATca
ccattttgtattttttagatTGCAAGGTCGGGTGCTGTCATTGGAATTTG
TCAAAGGAGATTATGACCGCCAGAAGCTTGATGAATTATATGAAGCTACA
AATAGACATAAGGTTAGtagtgaaaaagttttttctttgacAAGATAATG
TCAATATCACACCATGGTGAGTaaaaaaaTAGACATCAGTTTCTCTATTT
GCCCGAGTTTCAATCCCATCGTTCATTACGTTAATTTCTTATGTACATTA
ATTACACTTCATGACAAAGAAAATGTAACAACTTTAATGACTTTGAAATC
AAGACGAAAGGGATTATGGGATTGAAAGTCGGACACatttgaaaagtaat
aattatgacgtttgcataacaGAGCGCTATTATATCATTTAGAACATTGA
TTTGATTGGTATCAATATATCAGCCATAATTTGATTGCCTCAATTTACAA
TTTATTTACAGATTGAATTCGaaaaaaaGGTTCTGTAAACTGaggttgta
aaaataattatatctTTAAAAATCATGCTTTAGGGTTTCTTGACTTCATG
GGTGATTCACCACTGTTCGACCTGGCTAGACTCATTCAAGGAAGAAGAAA
GGAAAATCTCCGAAAAATTAAAGCAACAGTTAAAGTGTTGCGAAGATGAT
AGATGGCATGATGCTGTAGCATTGGTgctatttacaaaatttattgtaag
ttcttaattttttatacAGGAAGTCGATAGTAAAATACCAGACATGTGGA
GTGAaagaattttaaagaatttttgacCCTTATTCTTGGAAAgggcattt
tttttaatttcaacatggagaccacctattttctGGCTCTTTTTcggggc
cgtccatatagtatgTACgcaaaaactttccaaaattttgatactGCCTC
cacccccttgtacgcagagaacaatagaaatgatgtcatttaaacaaaaG
ATGTATGCTTTCACTAAACCCCCTCTCCCTTCACTGTGTGTGTACTACTG
gctgtttcaaaaaaaagtgtacaagtttGAATTGAGATTGTGAGAAAACT
ATTAGAAAGGAGAAATgccaacttaaattttgagctatcatactttaaat
ttgcttcacgtattcaaaagttatgaagaaaattagaaaaaaatctcgtt
caaaaaatgtacttttttgagaaaaaagagggGATCAATATTCAAGCTCA
CAAAACActaaaaaaagctttatttaCGATATTTTTTCGTAACCTAAAGA
TTTGAGaccttttcaaatgttttgattgccAAAAGAATACAAAATAATCG
GGAAAATGGGAAGGAATTTCACAATCATCACAAATACTCTAACTTTTTCT
GaccaaaattttgagttttccaGGATAAGTGGGAATATTAGGAAATTTAT
GTACCAAAACTTTCTCCTAAAAACCCAAAAGCAAACCAGAAAGATTCGTT
TCCAGCTAACATCAAGAAAATGTTCCAATATTATTCAAATTCACACACAT
GCATTTTGTCTaataataaaattataaaatttgtcaaacaaaGTTCCAAA
TCATcttaaaaaatcaatattttggaGATCTTTCAACAGCAAAGCAAGTT
TAGCTATCGCTTGAGAACTACCATTTCAGTTCGGCAAATTGCATAGTTCC
GCAATGTTGTAAAATTTCGCAGCACTGTGTTGTCCAAAGGCCAGAGCAGC
GAAATTAGCAGGGTAAAGCTGCTGAAAAGTCGCAAAGTTTTGCCCTGTAG
CTGGCCTCAAACTGGGTTCACAAGTCCATCCAATCAAAATGCACCGAAGG
AGAATCACAAAATTTGATTGCCTTTTCAGTGACGCATCGTATTCCCAAAA
ATAATCCGTATCTGAGaactattgaaaatatttgagcCATTGAAAAGATT
TCGTTCTTTATGATACATGTATGATACaccactttttttatcacaatttA
GTTTTGCTCTTCAATCGGtatcaatttttctttggtgGATGAGGTccgaa
aattgaaacaaaactaTGAACGGACAGAGAGATCCTTCTGGCTCACTCTT
GAGACGAAGCTCAGAGAATTTGTCAACAATTGTGACCGTGAAAAGGTAAT
GCAATAAATGTGATTGATAGTTTGATGAATACTTCATGTTaggttttttt
catatttcttgtTTAGAATGAATCCATAGATGTAATATTTAGTTCCATGT
ATCGTTTTAGTTACTATCTTGGTTAAAGCCAAACGCTTCCATT Coding sequence (CDS) from alignment at sc0000348_pilon:152220..158412+ >XLOC_039162 ID=XLOC_039162|Name=XLOC_039162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2928bp|location=Sequence derived from alignment at sc0000348_pilon:152220..158412+ (Clytia hemisphaerica_ch_hm2_pilon)
aacaaaataaaaataatcaaaatgataAATGAATATGTTATTGAAAACCA
GAATACGTTCTATAAACCattggaaaaaaagaagaaacttcAACTTTTCT
GTGAAGTTGTCATGAAAATCATTGGTTATATTGAAAAGGCAAATGAAAAA
GTCAAATCTTGGGTTTTGATGTGTACCTACAAAAATGAACATCTTGTTGT
TGAAACAAAaacaaaataaaaataatcaaaatgataAATGAATATGTTAT
TGAAAACCAGAATACGTTCTATAAACCattggaaaaaaagaagaaacttc
AACTTTTCTGTGAAGTTGTCATGAAAATCATTGGTTATATTGAAAAGGCA
AATGAAAAAGTCAAATCTTGGGTTTTGATGTGTACCTACAAAAATGAACA
TCTTGTTGTTGAAACAAAGACAATCATATtggattttgatgtttttactg
CTAGTCCATTGGTTTTTGAGAAACGACTTACCTCTGCTGTCGGTTATTCG
GTGTCTGTAGGATCTGGAGTACAATCCAAAGATATCAAGGACTATAAGTT
CTTTCTTCAAAGCCAATACACAGAACCTATACCATATACGCTGATAGAAA
AAGTTGGTTTTATTGGAAAAGGGACTTGGTTTTTAAACGAAAAAGACAAT
CATATtggattttgatgtttttactgCTAGTCCATTGGTTTTTGAGAAAC
GACTTACCTCTGCTGTCGGTTATTCGGTGTCTGTAGGATCTGGAGTACAA
TCCAAAGATATCAAGGACTATAAGTTCTTTCTTCAAAGCCAATACACAGA
ACCTATACCATATACGCTGATAGAAAAAGTTGGTTTTATTGGAAAAGGGA
CTTGGTTTTTAAACGAAAAAACAGACTTGGTCAAGGCAGGATTCGAAAAA
TcagatgaaaaatttattcttggAGACCAAAATAAATTCAAGCACTTGTG
TCTAGACGTAGATAGTTCCTtgtttaaaaaggaaaattgtaTCGAAATCA
ATAAGAAACAGACTTGGTCAAGGCAGGATTCGAAAAATcagatgaaaaat
ttattcttggAGACCAAAATAAATTCAAGCACTTGTGTCTAGACGTAGAT
AGTTCCTtgtttaaaaaggaaaattgtaTCGAAATCAATAAGAAGATATA
CGAGCTGTTAGAAGGATTTGGAACAAACCAATGGAATGCAGAATTTTGCT
TTGCTTTCATTTTATCAAGATTGCTACTGGCTGGTTCTCCTGCCTCATTG
GATTCAGGATATACGAGCTGTTAGAAGGATTTGGAACAAACCAATGGAAT
GCAGAATTTTGCTTTGCTTTCATTTTATCAAGATTGCTACTGGCTGGTTC
TCCTGCCTCATTGGATTCAGGCGAGAGCAATGTTCTTCTCCTTCATTCTG
GTTCCGAGGTAAGGAACGTTGGAAAGACATTGCTTCAGAAGCATATAACC
TTTGGACAAGGAGCAAGTCTCCAACACAAATTAATTGTATCTGGTGGGAG
TGGATCTTCTTCTGGGACAAGCAGGCGAGAGCAATGTTCTTCTCCTTCAT
TCTGGTTCCGAGGTAAGGAACGTTGGAAAGACATTGCTTCAGAAGCATAT
AACCTTTGGACAAGGAGCAAGTCTCCAACACAAATTAATTGTATCTGGTG
GGAGTGGATCTTCTTCTGGGACAAGCAGTCGTTCCCTTCAAGAAATTTGC
AACTCGTCATCAATGGTTCTGTGTGTAAACGAAACAAAGAATGGAGACAG
TCAATCGGAAATGCTTATCCATTTGCACGAGAGATTTTTCCAAGGCACCA
AAACTGGAGGTCTGGAATGTTCGGATTGTTCAGGGATCGTCCTGTCATCC
AATTATAAAGAACCGCAAAGTCGTTCCCTTCAAGAAATTTGCAACTCGTC
ATCAATGGTTCTGTGTGTAAACGAAACAAAGAATGGAGACAGTCAATCGG
AAATGCTTATCCATTTGCACGAGAGATTTTTCCAAGGCACCAAAACTGGA
GGTCTGGAATGTTCGGATTGTTCAGGGATCGTCCTGTCATCCAATTATAA
AGAACCGCAAAGatTGCAAGGTCGGGTGCTGTCATTGGAATTTGTCAAAG
GAGATTATGACCGCCAGAAGCTTGATGAATTATATGAAGCTACAAATAGA
CATAAGatTGCAAGGTCGGGTGCTGTCATTGGAATTTGTCAAAGGAGATT
ATGACCGCCAGAAGCTTGATGAATTATATGAAGCTACAAATAGACATAAG
GGTTTCTTGACTTCATGGGTGATTCACCACTGTTCGACCTGGCTAGACTC
ATTCAAGGAAGAAGAAAGGAAAATCTCCGAAAAATTAAAGCAACAGTTAA
AGTGTTGCGAAGATGATAGATGGCATGATGCTGTAGCATTGGTgctattt
acaaaatttattGGTTTCTTGACTTCATGGGTGATTCACCACTGTTCGAC
CTGGCTAGACTCATTCAAGGAAGAAGAAAGGAAAATCTCCGAAAAATTAA
AGCAACAGTTAAAGTGTTGCGAAGATGATAGATGGCATGATGCTGTAGCA
TTGGTgctatttacaaaatttattTTTTGCTCTTCAATCGGtatcaattt
ttctttggtgGATGAGGTccgaaaattgaaacaaaactaTGAACGGACAG
AGAGATCCTTCTGGCTCACTCTTGAGACGAAGCTCAGAGAATTTGTCAAC
AATTGTGACCGTGAAAAGTTTTGCTCTTCAATCGGtatcaatttttcttt
ggtgGATGAGGTccgaaaattgaaacaaaactaTGAACGGACAGAGAGAT
CCTTCTGGCTCACTCTTGAGACGAAGCTCAGAGAATTTGTCAACAATTGT
GACCGTGAAAAGTTACTATCTTGGTTAAAGCCAAACGCTTCCATTTTACT
ATCTTGGTTAAAGCCAAACGCTTCCATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:152220..158412 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1432-1464:6161 |
| Aaloc | 1288-1431:5902 |
| Aaloc | 1126-1287:4484 |
| Aaloc | 1033-1125:3970 |
| Aaloc | 841-1029:3074 |
| Aaloc | 688-837:2580 |
| Aaloc | 574-684:1992 |
| Aaloc | 436-570:1663 |
| Aaloc | 211-435:585 |
| Aaloc | 1-207:1 |
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