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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:713350..720380+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039109 ID=XLOC_039109|Name=XLOC_039109|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7031bp|location=Sequence derived from alignment at sc0000015_pilon:713350..720380+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCAAGATAATGAAACCATAGATATTATAAAGAAATCCATTCACTCTTC
TATGGTAATGCTTTTGTTTTaatctttttcaactttttggacGTACCCCG
GTGGGGGGAGGGCCTATAAATTACCTGGTTTGTGTTCGGCGTTTGTCCGT
CGTTCGTCCGTTCCAATTTTACTCAGCTGAATAATAGGGcttttgatttt
tatcaaaGGTGCAATGTGGGGCCAATGTGACGGgcccaattttgaaaaaa
aatttgggcaaattgggccaaaaacggctaaagtcggtttttgactttgt
gaaaaactgattttttcatgaaagtaGGTACCAACATGGTAAAATGGCTC
AAGTATTTTTGCATAaaattgttggctcaaaaacgcATGTTCTCTATAAG
AATCACGATTATAAGCATAAATCAATGTTCTCAGtcaaattctcaatttt
ttaggagatagatgtttttttttgcttagagggcttacttttgaagaata
tgtgtgtttaaacGAATTTGGTTGCTTGGGGGGTTTATAAACCTGGccaa
tttgatatttttttatagagCCTTATCAATAACTTCTAGGTATTAGCtgt
ttctcgagattggctctttcattttttatgatttcttgcacaaagatgca
taactataaaccctcgaatgtgacggagcccgattttcaaaaaaaaatgt
ttttgggcaaatttgggccaaaaaacagctaaaaaacgggtttttttGgg
ctttgtgaaaatttggatcattaattttctgattttttgctgatGTATGG
ACCATCATAGGTAAAGAAGATCTGTTAAAGTTAAGacgcctaccgcccac
gcgccttacgcgccttacgcgcccacgccttacgcgccacgccctacgtg
cccacgcgcctGAATTTCAACGCGCTTTTAAGTTTTGACGCACCTTCTTA
GAGGATTTTTCATATGCGATTGCGAGTTAAGTTACGAGTTTGCAGTAGAA
CCACAGTTACGAGTTttcacgagttacgagttaccagttgcattttaaca
aaataaaatcgcgagtttCGAGTTACAAGATGcattttaacacacaaaat
tcgcgagttgcaaattgaaagtgcgagttgcaaattaaaagtgtgAGTTG
CAAAtctaaaagtgcgagttgcaaattaaaagtgcgagttgcaaattaaa
aaaaagtctgaGCCTGTTATCTTAAATAATAATATGacaaaaaaagctta
aaaccCAAAGCAAAGCATGGATAACCCAGCCAAACTGTTTACTTTTTGTG
ACTAAAGTTGTGTAACCACTCAAATCACACATCTTTTCGCTCATTTTTGT
ATGAACAGAGCATTAAATAACTTTAGGCGCGTGCCTCTTccaagagaaac
attttttaatgttGCTTTTAATAACGTGGACATTACctttcattttcttg
acaaagtgactctttttgatgaaattattgACAAGCTACTTAAGGCCCTT
AAAGCTTGGTCCTCACTTATAGAAAAAATCGCGTCTAATCACTAGACGCC
CGCGTCTAACATTAGACGCGCGCGTCGAGTCCTTAGGCGCATGCGTCTAG
AAATTATGTCTTTGTTGTCCTCACTACcatgaacttttttgaattaaagg
aTTCAAATATGGGAAATGTGAATAAATGAAGTTATGAGTTTGAGCTTCTC
TTCAGAAAGAAGATGGATAGCAGTGATGATGAGAGCTACTTTGATAATTG
TGAAGATTTGCTCCTTCTACTTTTATTacgaaaaagacaaaataggaGAA
AAACGCGTCGCAGGTGGTTTTGGGTACGAGATATTTTTCAAGAAAGACCA
ATCCATGGAACGTTTAATACTCTTGTTTTAAACATTGCTAAAAGACAGTG
AAATGTTTCTTCGGTATCAAAGAATGACTCCATCTTGCTTTGAGCATCTT
CTCTCACTAATTCAACATCGTATCAGCAAGAAAACCACTCAATGCGTCAG
CCAATATAAGTTAGAGAACGTCTCTTTGTAACATTAAAGTTTCTGGCCAC
TGGAGAAAGCCAACAATCCCTGTCAGAGACATCATACCAGatgtctctga
aaaaactttcccctgtttgattcaaaattgcgaaaaagtgaaaaaatata
ttagcttgattttttcgaaatcgtttagaGGAAGGTTTAACTAAAATTTT
GGAatatcaaaattgcttcattagatcaaaagttatgacaaaaagagtta
aaaaatatttttcaaaaagagcgaaaaaatacgaaaaagatatgaaaaGA
TTACCAGAATTTACAACTTTGTGGACATTTAATTCTGTTTACATTGCGGT
GCCTTTGAACGTTAGACGCGCggaacaaaattttttgttccACGCGTCTA
ACAAATTTTGTCAAAGTCCAGGCGTCTAACACTAAACGCCCGCGTCTAAC
ACTAGACGCCCGCGTCTAACGAGTGTACTCACTAGAGGTTCCAAACACTT
AGTCGCGCGCGTCTAATGTTAGACGCAGGCGCTTAGTGATTAGACGCGAT
TTTTTCAACAAGTGAGGACCAAGCTTAAGTGTGATACCTGCAAGCTTTat
taaaccaaatattttaattgtaccgaatgagatgcctttgatataaatag
ataaatattttcaaaaagcaaacACTGGGAAaggcagttttagagataca
gTTCTAATTAAATATTCCATTGtccttattttgataaaatcacttatttt
aatgaaataatgatctgatggtCATATATAGAGCTTCTTTAAACAACTCA
AGCAAAGGTTTTGTCACTTATAAATTTGATGCTGATAaaacaaaaggata
gaaattgacaccctATTCAAGCTTCAATAGCTTTCAAATGGGctgttcta
caatcatggtcaaaatttattgagaatttagcttgttttctcgtttttcg
aatttggagttcgggcgagaaagtcgattttgggccatttcAATTTTGGA
TCTTCAGATCCTAGGTcctaaaactctacccttccaaccaaatttagagc
acttccaagtcgtttgtggttttgaaaatttgcgggattttctctttttt
ctaaaatattacgacAATGATTgtacacgttttgcacgtgaTCTTATAAT
TACTGTTGGTGAAACAacccctcagagccaccattCTCAGCCTGTTACct
tgttaccccctgttaccctgTGTTACTCTTTTTAGTAACAACACCTCTTA
CCCCCGCCCGCACGGGAGCACTTTTCTCTACAGTACTTTATACTCTTGCA
ATGTAAATACatactttttgtacatttttttcttctccacCAAACGAATG
TTTGCTCTTTTTTATGTATAATAGTGAGCAGCaataatcattttctttta
tcaatagaaatgtTTTTCACCCTTACTGACTTTtcgatttgcaactcgca
cttttaatttgcaactcgcacttttaatttgcaactcgcacttttaattt
gcaacttgcatttttaatttgcaactcgcacttttaatttgcaactcgca
ctttcaatttgcaacttgcgaattttgtgtgttaaaatgcaactcgtaac
tcgcaactcgcgattatattttgttaaaatgcaactcgtaactcgtaact
cgtaaaaagtaactcgtaactcgtggttctaaatgcaactcgtaactcgt
aactcgcaactcgcagaTGAAAAAATCCTCTAAGAAGGTGCGTCGAAATT
TCAggcgcgtaggacgcgtagggcgcgttggcacgtaaggcgcgttggca
cgtaaggcgcgtgggcgcgtaaggcgcgtgggcgcgtaaggcgcgtgggc
gcgtaaggcgcgtgggcgcgtgggcgcgtgggcgcgtcaataaatagggg
cgcgtgggcgcgtaaggcgcgtcatttaacagactcgTAAAAGATGgtta
aaagaagatttttgcaaaaaaaaatttgttggctcaaaaaatgcaTGTAT
ATGTGtaagaattactattaataagcatacatcaatgttcttagtcaaat
tactcaattttttgatgagataaatgttttttttgctcacaaagtcttga
atatgaaagaatatttcaagagcatgaaatttttgtttcaaaacgttttt
tttataagaaacaaacgactaattttaatagatcgtcactatttgtgttc
tgaatcattgtttaacggtcatgctcacgtagatatcaattatatatgtg
ttaaatgcataaccaggtaggtcaataaaagtatcacttgttatttaATA
GTccaaactgaaataaaaacacAATCATAGTAACTCTcagataccgggtg
cgccacaaaaaagtttctctcttcaaagttaattttctcgaagtctgaaa
attttaaaagaaccattcctttttcattggaaagaagaatgatgaagtta
aattttgataggtcatttattgaatttggtttattagaccaaaagttatg
ctcgattgaataaaaaagttactttcggaaagtgctcgaaaacgttgaaa
atcaacctatcaaatttttattttaaaatttggcagttgtgatagccttt
GTACGAATAAGAGCATTTCTTAGCAATTATAcgcataaattttgaaactt
aagCCTAAAAAGGGTTTATAATCTTtatgaaaatcattttcattagtttt
taccgagtttatcgctagatttttggttctagactggataaagtcaaTGT
AAGGCTGGATTTATCTCGCAACCCATATTTCATgcattttgattaatttt
gccagaatttttggcattttctgaagaattttctACCTTAAGttgaaatt
ctacttttctttGTAAAACAAAAGGTCACTTTAACagctaattataattt
ttaatgactaaaacaacaatactgatgtatcatgtgatcgtgcttctgtt
taatttgataggctgattttcaacgttttcgagcacttttttaaagtaac
ttttttattcaatcgagcataacttttgatctaataaaccaaatttaata
aatgacccatcaaaatctaagttaatctttcttctttacGATGAAAAAGG
ATTCgttctttcaaaaactttagatCTCGGGATTGAAAGTTCACtctaaa
gagagaaacttttttgtggcgcacccggtataaaggttttatttttacat
aagtgttcctatttcatatcagacacacgtttcatatcaggacagtatct
gcctttctgaccaatcttgctccacaactgtgtcaattcaatatcaaaaa
gcttgtaaaataaaattgatgagtaagcaaacaatatcaatCTTATctta
acaaaacctttaagctaAAGCTAAAGTGATAAGATTTTAATTCACAATGT
GATTTTTAAATAAGTCTGAGAAAACCAATTGGATGGATTCGAGTAATTCG
ACCCTCCCCACCaaaatttttgggtatttttccttttttgttgaaaaaaa
tgcCAATTCTAAGGTGCCCCaaaaaaaTCggccactgggggggggtcaat
acACTACTGATTGAGCCTCTGCTTcgtttatataaaaattttaatggttt
tttattttttttggtagATCCATCAATCAGGAATCCAATACTTTGGATAT
CTATTGGAAGATGATGATTCCAGAATTGAAAAAGGGATTGAATCATTGAA
AGGCTTAGATCAATTCATTGTAAGAAGTATTGAAAAAACTAACAAAGAAT
TACCAGAAGCTGTACAATTTTCATTCCACTTGGCAGAATTGACAAGAACT
GTCACTGATGAAACACGAACAAATTCTCGTGGAGAAAGTATGTCTTTTGT
CTTTCTtggtttttcatttctttataacCTCTAAGATCCtcatttttgag
aaagtttttcCAGCTTGTAGACTTACACTCTTTGttttatttatctattt
ttttacAGAGTTTCTTTGTCTTCCaaaaaaaTAGTCTTGCTTTaaagaaa
ttactttttttacaGAGATCAAAGGCACCAGAACAATCAACAAAGTAACA
AATGCAAACAACCTAGATGGCTCGATGAAATATTTGGAAAGTTTTCCCAT
CAATATCAAAGAAAGTTTGCTGGGGAGAAATGAAACAATTGACTGGGGTA
CACCAAATGAATCacttatgaaaaaagtttattcAAGATTTATTGTTATA
GCCATTGccaaaaaacactattttgaGACACTTTGCTCATCTTACTCGCC
ATTACCCTGTATTCAATTTCTCATGGAAGAGCAACAAACTTCACATCCTg
atttcaaaaagcatttaagATTATTTCTGAGAGAATATCCAGCAAATTTG
TATGTGGGACACCAATCAGATACTATTATTGTTATtgcaaatttgttgaa
agaggCTCAAATGCCTGATTTGACCTTACTTTATTTAAAGCAGCTCATAA
TATCGAAAGCTAAGCATAAAGAGGAACTCGTTTATCAGATCTGTGATGAC
ACTGAAGAACCAATAGCAGAATTATTCAAATCTGTGTCTTGGGAAGACAT
CAAAGCGACAGTAGAGAAAGTTGTGGGAAAATGTCATTGGAAACAGCATA
TTAAATGGTTGGATATCGCTTCCAAAAGTGGAATAAATGAAATCGCTGAT
ATAGTCATTTGTATTGCGTTATATAATCTCGAAAATTCTGACGATATTCC
AAAGCGAGGTTTATGGGTCAAAATCTTCGTGCAAATATTCAATAATGATC
GTCTATTTGAAAGTTGGTTCGACTCTCTTTTAAAATGTGAAGATATTACA
AAAGATATGGAACTAACTGGGAAACTGTGTGAATTTATCCCGTCTAGACA
CCATTCGCTCCCCTTTCTAATGAAATGTTTTGTTGAGAATGTATATGAAC
AAGGATATTTGGGTCTCACCGATAAAGATACCAAAGATTTTTGCAATACT
GTTTTGATCCTTGTTAATAACTATGATCGATCCAAGCAGGAATTAACCGA
TTTGTGTGATTGTCTACTGGTTAATGATAAC Coding sequence (CDS) from alignment at sc0000015_pilon:713350..720380+ >XLOC_039109 ID=XLOC_039109|Name=XLOC_039109|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000015_pilon:713350..720380+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCAAGATAATGAAACCATAGATATTATAAAGAAATCCATTCACTCTTC
TATGAACCAAGATAATGAAACCATAGATATTATAAAGAAATCCATTCACT
CTTCTATGtagATCCATCAATCAGGAATCCAATACTTTGGATATCTATTG
GAAGATGATGATTCCAGAATTGAAAAAGGGATTGAATCATTGAAAGGCTT
AGATCAATTCATTGTAAGAAGTATTGAAAAAACTAACAAAGAATTACCAG
AAGCTGTACAATTTTCATTCCACTTGGCAGAATTGACAAGAACTGTCACT
GATGAAACACGAACAAATTCTCGTGGAGAAAtagATCCATCAATCAGGAA
TCCAATACTTTGGATATCTATTGGAAGATGATGATTCCAGAATTGAAAAA
GGGATTGAATCATTGAAAGGCTTAGATCAATTCATTGTAAGAAGTATTGA
AAAAACTAACAAAGAATTACCAGAAGCTGTACAATTTTCATTCCACTTGG
CAGAATTGACAAGAACTGTCACTGATGAAACACGAACAAATTCTCGTGGA
GAAAAGATCAAAGGCACCAGAACAATCAACAAAGTAACAAATGCAAACAA
CCTAGATGGCTCGATGAAATATTTGGAAAGTTTTCCCATCAATATCAAAG
AAAGTTTGCTGGGGAGAAATGAAACAATTGACTGGGGTACACCAAATGAA
TCacttatgaaaaaagtttattcAAGATTTATTGTTATAGCCATTGccaa
aaaacactattttgaGACACTTTGCTCATCTTACTCGCCATTACCCTGTA
TTCAATTTCTCATGGAAGAGCAACAAACTTCACATCCTgatttcaaaaag
catttaagATTATTTCTGAGAGAATATCCAGCAAATTTGTATGTGGGACA
CCAATCAGATACTATTATTGTTATtgcaaatttgttgaaagaggCTCAAA
TGCCTGATTTGACCTTACTTTATTTAAAGCAGCTCATAATATCGAAAGCT
AAGCATAAAGAGGAACTCGTTTATCAGATCTGTGATGACACTGAAGAACC
AATAGCAGAATTATTCAAATCTGTGTCTTGGGAAGACATCAAAGCGACAG
TAGAGAAAGTTGTGGGAAAATGTCATTGGAAACAGCATATTAAATGGTTG
GATATCGCTTCCAAAAGTGGAATAAATGAAATCGCTGATATAGTCATTTG
TATTGCGTTATATAATCTCGAAAATTCTGACGATATTCCAAAGCGAGGTT
TATGGGTCAAAATCTTCGTGCAAATATTCAATAATGATCGTCTATTTGAA
AGTTGGTTCGACTCTCTTTTAAAATGTGAAGATATTACAAAAGATATGGA
ACTAACTGGGAAACTGTGTGAATTTATCCCGTCTAGACACCATTCGCTCC
CCTTTCTAATGAAATGTTTTGTTGAGAATGTATATGAACAAGGATATTTG
GGTCTCACCGATAAAGATACCAAAGATTTTTGCAATACTGTTTTGATCCT
TGTTAATAACTATGATCGATCCAAGCAGGAATTAACCGATTTGTGTGATT
GTCTACTGGTTAATGATAACAGATCAAAGGCACCAGAACAATCAACAAAG
TAACAAATGCAAACAACCTAGATGGCTCGATGAAATATTTGGAAAGTTTT
CCCATCAATATCAAAGAAAGTTTGCTGGGGAGAAATGAAACAATTGACTG
GGGTACACCAAATGAATCacttatgaaaaaagtttattcAAGATTTATTG
TTATAGCCATTGccaaaaaacactattttgaGACACTTTGCTCATCTTAC
TCGCCATTACCCTGTATTCAATTTCTCATGGAAGAGCAACAAACTTCACA
TCCTgatttcaaaaagcatttaagATTATTTCTGAGAGAATATCCAGCAA
ATTTGTATGTGGGACACCAATCAGATACTATTATTGTTATtgcaaatttg
ttgaaagaggCTCAAATGCCTGATTTGACCTTACTTTATTTAAAGCAGCT
CATAATATCGAAAGCTAAGCATAAAGAGGAACTCGTTTATCAGATCTGTG
ATGACACTGAAGAACCAATAGCAGAATTATTCAAATCTGTGTCTTGGGAA
GACATCAAAGCGACAGTAGAGAAAGTTGTGGGAAAATGTCATTGGAAACA
GCATATTAAATGGTTGGATATCGCTTCCAAAAGTGGAATAAATGAAATCG
CTGATATAGTCATTTGTATTGCGTTATATAATCTCGAAAATTCTGACGAT
ATTCCAAAGCGAGGTTTATGGGTCAAAATCTTCGTGCAAATATTCAATAA
TGATCGTCTATTTGAAAGTTGGTTCGACTCTCTTTTAAAATGTGAAGATA
TTACAAAAGATATGGAACTAACTGGGAAACTGTGTGAATTTATCCCGTCT
AGACACCATTCGCTCCCCTTTCTAATGAAATGTTTTGTTGAGAATGTATA
TGAACAAGGATATTTGGGTCTCACCGATAAAGATACCAAAGATTTTTGCA
ATACTGTTTTGATCCTTGTTAATAACTATGATCGATCCAAGCAGGAATTA
ACCGATTTGTGTGATTGTCTACTGGTTAATGATAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:713350..720380 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 451-1464:6018 |
| Aaloc | 226-447:5615 |
| Aaloc | 172-225:1 |
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