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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:180147..183621+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039104 ID=XLOC_039104|Name=XLOC_039104|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3475bp|location=Sequence derived from alignment at sc0000041_pilon:180147..183621+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTGTTTCGAAAGATCCATATTCTGAGAAAAGTCAATGCTTCTTC
AAGAAGgtattttttaaattagatcagcataaatttatttgaggcAGATT
ACTCAATTAATTTTGGAAATGCTTAATCAATAATCAAAGAGATAATttac
tattttttgcttatggTCTgcctaaaaaaaattgagatgcAAAACAGCAA
GAAATCGTCCTGCATCATATGGTCTTTCTACCTCGTTTCCTGCTTATTat
tagcttttttatgcttactgatagcgctagataatctGTGGCGTCAATca
ataacgtaaataaagcctggaatacacggggatgAAGTTGATGGGATTTC
ACTTTACTTATCCCAGTTTGTTAAATTTAACCACCTAATTCTTTGATATC
TTGTTAGGATAggccttaaaactcaaaattgatATGTCCTTTCAACATTA
TAAGGGCCTTTATAACTTTTTTATAGTTAGGGCGAATTGTTGTTCAAGGC
TCAGTTAACCGGTTTTTGAGAAACCAATCATTTCTCAAGTTACCAGTAAT
ATTAAATATATCTTTTTAAACTCTTTAATTAAATTATATtcgttttttat
ctttgtgtaGCGGCAGCTATGTGCAGGCGGAGACTGAGGAGAGTTTATCA
GCAGTCAAGTTGATAGCCATCAACCCTAATGAAAATGACGAAGAAGATGC
AGCTCCTACAACTCCCATGATCAATAATCGTCCTTCTTCAGGTTCGTGAG
ATTCAACTCCTTTGGCTCCTAATTTTATTATCGtcaaaaagctttagaaa
attGCTTTTGAAATGCCTTTTTGGTTTTGGGATGCCGATCTAAGTGTCGg
gcttttgatttctttttgaaagtttcgTTATACGATTTTTTCACTCTACA
CACAGGTGGGGGAGAACGTGAAGGACTGGAAGAAGCTGCCGCAGAAGGAg
ctatcgataaagtgaaacaTTCCTCTATCTCAGCAATCGATACCATTCTC
ACCAATTTCACTGGAGTAGGGACTGCAGATGATAAGGAAGTGTTTGAAGA
TGAATCTTTAAGTGCTGACGTCACCCTCCTACAAGCTTCAAGTGAAGGAA
ATATCACCCTGGTTAAGAGCAGGATTGCTGCGCTACAGGAAGAATCTAAA
AAGTTGACAAGTGATCTAGATAAAGTAAAGGCTTTGGTTTCCAAAGAGTT
GGATCGTTTGGATGAGAAGGATTTCTCGGCTCTTCATTTGGCATCGCGTT
ACAACAGGAAGAATGTTATAAAAGCGTTACTGGATGCAGGGGCGAACATT
GATTTGGTTGGATCTGAAGGGTTAACACCGTTACATCTGGCTACTAAGTA
AGAATCCTGCTATTTATATTGCTATTGCATGGTACCCCTTACTTTGCTGA
AAgaatatcaaaactaatttacAGCGGACTCCCGCTAATTTGAACTTCTA
TTTTCGAATATATTATTCGAGATAAATCTCAGTCTCAGTCAACTCAGAAT
AGCTGGATTCAAACTCGAGATACGAAGCAAAATTTATGCCTTCCCTGATT
TTCGTTGTCaataaaagtaatttttctgCTGTCGAACCATAATGTTTATA
CTCTGGACCTCTTTAAGCCGAAAGTCGTGCAATTCTCATCACATAccatt
tattctattttttaaatctattctTTCTCTTCTCTTTTACCACCCAAAGG
AAAATAATAGGTAACATCGttttttttAATGCTTGCAACCCTTACAGTAA
ACAAAACATacgaaaaatctttgaaaagaatTATTCTAGGAACCAGTTGT
AAATACTATATAAGTAAGTACTAAATCTAAGGGACCCGGCCTAAAAATAA
CCACAATGCAACAGTCTGGATTAAGGGGGCTGGATGTAAGTTTTAGAAAA
CGCAAAAACTGCTCCCATGTAATACCTGGtccaaccactgacctttatat
aagtctggaccaagcttctcaatcccagccaagcaaaatctttgatcgga
gtttttttcggcactactcgatagcggtgtaaatgcatcgagagcgctag
gtctacttttcctcaaattcttttgatgatgtagcggcattagacgttaa
tttttaacactgcaatggcttctcctcgcgtaccaattccaaaaaaactc
caatcaaagatggcagatattgcttggtccaggattatataaaggtcagt
gggtccAACAATTGTATTGATGCTACCCTGTGGAAATCTAGGCAAAATGA
GTGACGATAAAAGATTATGATGATGCTGAAAATGTTTCACATAAAGCAGT
GTTTCACttcttgtttttttggacctaccccggtggaggtcctataaatt
aacctttgtccgtccgtccgttagttaccagcttttctcgagattggctc
attagttttttctgattttttgcacaatgatgcaaaatggcaatgcccaa
aatgtgacggagcccgattttcgaaaaaaaaatttggggggcaaatttgg
gccaaaaaatggctaaaaaacgggttttttggactttgtgaaaaattgga
tcattaattttttctgattttttgcacgaaagtagggtaccatcataggt
ataagatggctcaagcagatttttgcaaaaaaattttgttggctcaaaaa
acgcatgtttatctataagaatcactattaataagcatacatcaatgttc
ttagtcaaattactcaatttttttatgagataaatgttttttctgctcat
gagggcttacttttgaaggatatgtgtgtttagacaggaaatttgggttg
cttggcgtgtttttatagaaaaactggccaaattcgatatttttttataa
gcacattatcaattacttaggtattggcttttctcgagattggctctttc
attctttatgattatttacacaaagatgcataactataaacccttgaatg
tgacagaacccgattttcgaaaaaaaatgttttggggcaaatttgggcaa
aaaaaaacggctaactaaaaaacaggtttttggactttgtgaaaaattgg
atcattaattttttctgattttttgcacaaaagtagggtaccatcatagg
tataagatggctcaagcagatttttgcaaaaaaaattttgttggctcaaa
aaaacgcatgtttatctataagaatcactattaataagcattacatcatg
ttcttagtcaaattactcaattttttttatgagatagatttttttCTGCT
CATGAGGACTTACTTTTGAAggatatgtgtgtttagacaggaaatttggg
ttgcttggcgtgtttttatagaaaaaactggccaaattcgatattttttt
ataagcacaattatcaattacttaggtattggcttttctcgagattggct
ctttcattctttatgattatttacacaaagatgcataactataaaccctt
gaatgtgacagaacccgattttcga Coding sequence (CDS) from alignment at sc0000041_pilon:180147..183621+ >XLOC_039104 ID=XLOC_039104|Name=XLOC_039104|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1500bp|location=Sequence derived from alignment at sc0000041_pilon:180147..183621+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTGTTTCGAAAGATCCATATTCTGAGAAAAGTCAATGCTTCTTC
AAGAAGATGAATGTGTTTCGAAAGATCCATATTCTGAGAAAAGTCAATGC
TTCTTCAAGAAGCGGCAGCTATGTGCAGGCGGAGACTGAGGAGAGTTTAT
CAGCAGTCAAGTTGATAGCCATCAACCCTAATGAAAATGACGAAGAAGAT
GCAGCTCCTACAACTCCCATGATCAATAATCGTCCTTCTTCAGCGGCAGC
TATGTGCAGGCGGAGACTGAGGAGAGTTTATCAGCAGTCAAGTTGATAGC
CATCAACCCTAATGAAAATGACGAAGAAGATGCAGCTCCTACAACTCCCA
TGATCAATAATCGTCCTTCTTCAGGTGGGGGAGAACGTGAAGGACTGGAA
GAAGCTGCCGCAGAAGGAgctatcgataaagtgaaacaTTCCTCTATCTC
AGCAATCGATACCATTCTCACCAATTTCACTGGAGTAGGGACTGCAGATG
ATAAGGAAGTGTTTGAAGATGAATCTTTAAGTGCTGACGTCACCCTCCTA
CAAGCTTCAAGTGAAGGAAATATCACCCTGGTTAAGAGCAGGATTGCTGC
GCTACAGGAAGAATCTAAAAAGTTGACAAGTGATCTAGATAAAGTAAAGG
CTTTGGTTTCCAAAGAGTTGGATCGTTTGGATGAGAAGGATTTCTCGGCT
CTTCATTTGGCATCGCGTTACAACAGGAAGAATGTTATAAAAGCGTTACT
GGATGCAGGGGCGAACATTGATTTGGTTGGATCTGAAGGGTTAACACCGT
TACATCTGGCTACTAAGTGGGGGAGAACGTGAAGGACTGGAAGAAGCTGC
CGCAGAAGGAgctatcgataaagtgaaacaTTCCTCTATCTCAGCAATCG
ATACCATTCTCACCAATTTCACTGGAGTAGGGACTGCAGATGATAAGGAA
GTGTTTGAAGATGAATCTTTAAGTGCTGACGTCACCCTCCTACAAGCTTC
AAGTGAAGGAAATATCACCCTGGTTAAGAGCAGGATTGCTGCGCTACAGG
AAGAATCTAAAAAGTTGACAAGTGATCTAGATAAAGTAAAGGCTTTGGTT
TCCAAAGAGTTGGATCGTTTGGATGAGAAGGATTTCTCGGCTCTTCATTT
GGCATCGCGTTACAACAGGAAGAATGTTATAAAAGCGTTACTGGATGCAG
GGGCGAACATTGATTTGGTTGGATCTGAAGGGTTAACACCGTTACATCTG
GCTACTAAgcacaattatcaattacttaggtattggcttttctcgagatt
ggctctttcattctttatgattatttacacaaagatgcataactataaac
ccttgaatgtgacagaacccgattttcgagcacaattatcaattacttag
gtattggcttttctcgagattggctctttcattctttatgattatttaca
caaagatgcataactataaacccttgaatgtgacagaacccgattttcga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:180147..183621 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 631-750:3356 |
| Aaloc | 190-627:908 |
| Aaloc | 58-186:612 |
| Aaloc | 1-54:1 |
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