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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:122213..127637- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039094 ID=XLOC_039094|Name=XLOC_039094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5425bp|location=Sequence derived from alignment at sc0000041_pilon:122213..127637- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTACATTTATGCTGTTTTTGATGATTGTTAAAGGTAAAATAGCTTT
TGAAGATGTATTTCATCAATTCTACAACACTTATTAATGCGATCTAATAA
TCAAGAGGATATTGGTAATCGGATTCAATGAAACTTTGATTGGCATTATA
GAATAAATCAAACGTGGTCGAATTAAGATTCAATCAACCTGACATGGTTG
AAAATTCGATTGGTATTCGAGCAATATCAATAATCCATCGGACAAGAGGA
TTCCCTTACAAAAATCTAAGGGGTGCCTTTCCTTGGGACTATTTTTTTCC
AAAACTGATTATAAACCTATCTAGTGTCACTGTTTTCTTAAATGAGTTTT
TAAAAAGTGTTTTTTTGATATTTGCTTTCAGTTGGTGTATTTTGCAGACC
AGCAATCAACAAGAGAAATTTCACAAGTGCATTTGATCAAATACAATGGA
ACAATGAACACATCTTAAATTCTGAAGGTGCGTCTTTTCCTGATGGTTGA
AAATCAACATGAAAAGCAAACGAACACAAAATTTGACCCCTGTTATCAGA
CAATGCGATTTTTTTATTTACCTTTATAGCGTATTGATTTTGGCGGAGAT
TAAATTTGGTGAATTTGGCGGATTTTGCTAAAATACACCAAATTAAATCC
CAGCTAAATTATACAAATTCTGCTATCCGCCAAATTAAATACCCACCAAA
AATCACATTTTGGCCAACCAACAAATTAAGTACACACCAAAATTAATACA
CTTAAGATAATCTAATCGAGTGGACTGTTTATTTCTACGTTGAATTACTG
GAAATTACTTGAATTACTTTGGAAGGCAGCTAAAGTTGGACTATTCTCCT
TGGAAATACCTTCCCAACGGTGTATAGATTAATACATTAATAGGTGTCCT
TTGTCTTATAGATTCTGAAGACCTTTTCGAAGATGATATTGTCAAGTCTC
CCGCAATCGATGAAATTATCAATCGCAAAATAACGTCACCAGGACGACAA
CGACGTGACGTCATCACTGGACCATATGCATGGCCAAATGGGAAGGTTCC
TTACGTATTTGCTGATGATTATCGTAAGTTTTGGTGTCGAGTTCAGACTT
CATTATTTTTATCTCTTCCAGCCGAATTAGACGTGAATTCAAGAAACTTA
ATTAAAAGTTTATTAAAGTTCTATGGTGAATTGAAGCTTTTTATGGCATT
GGTTATGAATAACAAAATAAGAACATACAGTATGTGGCCCCCAAAACGGC
GATCAAATTTGAAGTTTCTCTCAAATCTAGAGGAAAAGAGATTTTACAAA
CATTTTTGCTGCATGAAAACCTTTAACATCTCTACTTTATTTCCTGGAAG
TTCTTTTTCAAAATTTTCAATTTCAACAATATTTTTCAATCGCTTAAAGA
TAGGTAGCTTTTTTCTAATGGCCCCCAAAACGGAGGTTTGAAATTTTAGC
GATTTCTCGAGATATCTTTAAGATATGAATACAAAATTTTGACCATAGTT
TTGAAATATGATTTAGAGGGTTTTGGGCATAAATTTATTTGATAAAATTT
TTACAGTGTATCCCTGGTTGTCAAAATGCAGGTTTGGGGCCCCCAAAACG
GAGGTGTAGTTAAAATCAAATTATTAAGCCCAGTGGTAATAGGGGGAAAA
ACTATGAACATATTTGTGTTTTCCCTTAAATTTACGACCCGATGGATGTA
AAATTTATGATTTTTATGAAATATTTCAAGATTTTTGATATTGCAAAAGT
CCAAACTGAAAATTTAGAAATTTTCAAAATGACAATTTTTGATTTAACAA
CGTCTTAATCAAGTTTTTTGAGAACAAATCTCTTTTTGAAATAGTTCCAT
TTATGTATGGAATAAGCTGTGAAAATTTTAGAAAAAAAAGCTTAACTCAA
ACTGAAAAATATTAAGCTTTAAAGATATTTTTCTCCTATATTTGCAAAAA
AAATGACAGAATTTGCCGGTTTTTTGCTGATTCAAACGAAAAATCTTATA
TATAATGTTAATTTTTTGTTATAAACTATTAACTCATCAAGGTGGGAGGA
GTAGAATTCCAAGATTTTTTGCTTTTTCTCATATTTAGAATTTTCGGTTT
TGTCAATGCTGATTCTAGGGCTCCAAAATACTGGTTGACCTTCAAGATGC
TATATCTTTTACCCAGCCTCTAAAGTCACAGATGTATTTGCATTTTCTGA
ACGGCATTAGGTGTAGCAAGTTTTCTATACCCCGTTTTCATAACTTATTT
TCAATATCCAAGGAGCTAGAGTGAGTTATATGCAATTTTAATCTAATTTT
GGTGCTAAAATATTTCCTTTAGACGCAAATATTTTATTTTGAATCTGTCT
CAAACCAGCAAAAACATGCTCATTTTTAAGTATACCCATCATTCTTTCAA
AATAAACAAAAATCGTTTAATTCTGATAAATCTACAAGTCAGAATCTTCA
TTTCAATGAAATCCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCGTA
TACTGTAAGGAACCGTATTCACCACTTCTACCACTTTTGGGGTCGAGTTT
ATACTTTAATACTATTTACAAGATAGGATTTCATATCAAGTTTTCCGGTT
TCTTCCAGGATTCAGGCGATCCAAGTATCTTTCTTGCGCTCGATTCCCTG
AGAAACTTTCCAGAGGATATTCATTTTTCTGACACTCATTATTCATTCTA
TTCAGCCGAGTTCAGTAAATTTTGGGTGAGATCGTCCATGGATGAAATTC
AAAAAGTCAGTTGTGTTCAATTTATTGAAAGAACTGACGAGAAAGATTAC
ATCAAAATCGTCAACGGTACACAGTAAGTAAACACACAGTCTGATTTAAT
TGATGAATTTTGATAGCCCAAATGAGATCAGTGAAATATTTTTTATTATT
ATATACCCGTAGGCAAAAACAGCCATTGAATAATTCCTGATATACCACGG
TATTATACCACAGTAGAATTTTTTTTTCAAACTTTTTTTCGAAACTTGAT
TTTTTGTCACTTTTATTTTGTTGCTATTAAAGAGAGACAATAAAAGAGTT
CAATTGTGAATTTCGTGAACAATTGAATGACTTTAAATCAATAGGTTTAC
GTTGGTTATTGGATTTATTAACCCTCGGTGATAAATATTCAACTCGGCTT
CGCCTCGTTGAATATTACATCACCTCGGGTTAATAAATCTCAATAACCAA
CTTTTACCTACTGAATATCTGCTTATTATGTCGTCACACCCCGTCACACG
TTCATCTATGTCTCAGTCAAAGTTTAGGGTCTTTTGAAAGAAAAGTAGAC
TGGAGTCGTTTATAAATTATAATCCGTCTAACACATTAATATGGGTAACT
ATAATAATACGATCATTGTAACGGGATAATACCAGATACCTTATCGGCCC
TAATTTATACCTTCCATTATTTTTTGCCTATTTTTCAATTTGTCCGAGTT
AGTCGTCTAAAATACTGGATTAAAAGAAAAGCAAATATTTTTTAAAATAA
AACCGATAAAACAATGTCTTTTTCTCCAGGTGTTATTCATCCATTGGTCG
ACGTGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCTTTCAGATT
CGATTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTCATGAACAA
TCGAGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGATAATATTAT
CAAAGGTGAGAATGAGAATGTCAGGTTTGGAAAAAGTAATGTGTAAGGTA
TGAGCAAGCTTCCCATTGAACTTTCCATACAATTGATTTACAACGCGCTT
CTTCAAAACAACACCCTTTCTCAATCAAGTGAACAAAAGTTCGCAGAATT
CCAATGAGTCAAACGGAGCAAATAAACGCAGTTTGTATACTTTAAGGTCC
CAAATAGGGTCCGAAATCTTTTCAAAATCTAATAAACGAGGAGGTCGGAA
ATAGTTTCTCTAAACCCCCCCCCCTCCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAGTAATTATTATAAGCTCAAACCAGGTTTTTTTAAGAGCAATTCA
GCTTGTGATAGATGAAATTATTTTCAAAAATAAATAAACAGGGGGGAGAC
GTTTCTTCGGGACCTTAAAGTGGTTATAATTTCAAGTCTCACTGGATCCG
TTAATTTTCTGAGGAATCTGGTGGCTGGTCAGCAAGCAATCCCAGGATTA
CTTTATTCCGTTTATTGCAATATGCAACAAGCAAGAGTTCATGATTCTGA
TGGTTTCAAGAATTGTATACTTTGATTTTTTAGGAAAAGAACACAATTTC
GAGAAGTATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACAC
AAAATCTCTCATGCATTACTCAAAGTAAGATAAACTAACGGAAAATTGCC
AAATTTTTCTATTTTTACCAAATTATTGGAATACCTTTGTATGACTTATA
ATCATGACCGAAAGTGAAACTATCAGAATCATTGAATATTGTCTTGACTT
CATTGACATCATTTATTGACGAGTAAAGAGTAAAGAAAAAGTCAAACAAA
GATATAACTGATCTCTTTCTAATAAACCTAGGAGGTGTGGTTCTGTGGTT
AAATTTCAAAAAATATGGGAATTCTTTTTCAGTTACATCTTCGCGGTCAA
CGAAAGCAAAATGACGATCTCATCGAAATCCAACGCCTCAGAATCTCTCG
GAGGATTTGAAATGACCGACACGGACGTTCGACAATTGAACAAATTTTAC
AGCTGTCCATGTGCAGATCATATGTTCGGCTGTGAGTTTATTACAAGCAT
GTGTGGACAGTTTAGGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCT
GCCACACTAGCGAGAATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACC
ACAACCATGTCAAATAATACAACAACGTCCTATACGACAGGAAGAAGTCT
CCCTACAACGAAAGTAATTCCTACGGCAACTACGACCATCCAAACAAAGA
CGACAATAACTACCATTGTTTCTTCTACACGGGCCGTCATTACACAAACA
ACTCCTCCTGAGACAACAACGACCATATCTACTCCAACAACGGCCGTCCA
ATCGACTGCAACTGCCCTTCCAACGACGACATCGACTACCAGGGGAGTAG
GAAACAATACATGTTTAGACATGAACCCATGTTGCACAGAGCTCGCAACA
CACGGGTTGTGCAACAAAAGTGAATATATCCGATCAATATGTAACAAATC
GTGCAACAAAGAATGCAGTGGTTCAAATTCAACAGAACTTTTGGCCACAA
CACGATCGTCTTTCTTTGGAGACGAGCCACCAACACCTTCAAAAGCAATA
ACACTGTTTGCACCATTCAGTAGCTTATTTCTTTCACTGTTGGTGAATGT
ACTTTGGAGATTTGGATACACGTGA Coding sequence (CDS) from alignment at sc0000041_pilon:122213..127637- >XLOC_039094 ID=XLOC_039094|Name=XLOC_039094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2946bp|location=Sequence derived from alignment at sc0000041_pilon:122213..127637- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTACATTTATGCTGTTTTTGATGATTGTTAAAGATGGTTACATTTA
TGCTGTTTTTGATGATTGTTAAAGTTGGTGTATTTTGCAGACCAGCAATC
AACAAGAGAAATTTCACAAGTGCATTTGATCAAATACAATGGAACAATGA
ACACATCTTAAATTCTGAAGTTGGTGTATTTTGCAGACCAGCAATCAACA
AGAGAAATTTCACAAGTGCATTTGATCAAATACAATGGAACAATGAACAC
ATCTTAAATTCTGAAGATTCTGAAGACCTTTTCGAAGATGATATTGTCAA
GTCTCCCGCAATCGATGAAATTATCAATCGCAAAATAACGTCACCAGGAC
GACAACGACGTGACGTCATCACTGGACCATATGCATGGCCAAATGGGAAG
GTTCCTTACGTATTTGCTGATGATTATCATTCTGAAGACCTTTTCGAAGA
TGATATTGTCAAGTCTCCCGCAATCGATGAAATTATCAATCGCAAAATAA
CGTCACCAGGACGACAACGACGTGACGTCATCACTGGACCATATGCATGG
CCAAATGGGAAGGTTCCTTACGTATTTGCTGATGATTATCCCGAGTTCAG
TAAATTTTGGGTGAGATCGTCCATGGATGAAATTCAAAAAGTCAGTTGTG
TTCAATTTATTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAAC
GGTACACACCGAGTTCAGTAAATTTTGGGTGAGATCGTCCATGGATGAAA
TTCAAAAAGTCAGTTGTGTTCAATTTATTGAAAGAACTGACGAGAAAGAT
TACATCAAAATCGTCAACGGTACACAGTGTTATTCATCCATTGGTCGACG
TGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCTTTCAGATTCGA
TTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTCATGAACAATCG
AGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGATAATATTATCAA
AGGTGTTATTCATCCATTGGTCGACGTGGCTCGAACCAGACGTTATCTCT
CGGAGACAATTGTCTTTCAGATTCGATTATTCAACACGAATTATTGCACG
CCCTTGGTTTCTTTCATGAACAATCGAGACTAGAAAGAGATTATTTTGTT
ACCGTGCACTGGGATAATATTATCAAAGGAAAAGAACACAATTTCGAGAA
GTATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACACAAAAT
CTCTCATGCATTACTCAAAGAAAAGAACACAATTTCGAGAAGTATGGGTT
GGGTGAAGCATCACATTTAGATGAACACTACGACACAAAATCTCTCATGC
ATTACTCAAATTACATCTTCGCGGTCAACGAAAGCAAAATGACGATCTCA
TCGAAATCCAACGCCTCAGAATCTCTCGGAGGATTTGAAATGACCGACAC
GGACGTTCGACAATTGAACAAATTTTACAGCTGTCCATGTGCAGATCATA
TGTTCGGCTGTGAGTTTATTACAAGCATGTGTGGACAGTTTAGGACTCAA
CAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCC
AATGTCTTCAACGGTTTCCTCTTTAACCACAACCATGTCAAATAATACAA
CAACGTCCTATACGACAGGAAGAAGTCTCCCTACAACGAAAGTAATTCCT
ACGGCAACTACGACCATCCAAACAAAGACGACAATAACTACCATTGTTTC
TTCTACACGGGCCGTCATTACACAAACAACTCCTCCTGAGACAACAACGA
CCATATCTACTCCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCA
ACGACGACATCGACTACCAGGGGAGTAGGAAACAATACATGTTTAGACAT
GAACCCATGTTGCACAGAGCTCGCAACACACGGGTTGTGCAACAAAAGTG
AATATATCCGATCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGT
TCAAATTCAACAGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGA
CGAGCCACCAACACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTA
GCTTATTTCTTTCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACG
TGATTACATCTTCGCGGTCAACGAAAGCAAAATGACGATCTCATCGAAAT
CCAACGCCTCAGAATCTCTCGGAGGATTTGAAATGACCGACACGGACGTT
CGACAATTGAACAAATTTTACAGCTGTCCATGTGCAGATCATATGTTCGG
CTGTGAGTTTATTACAAGCATGTGTGGACAGTTTAGGACTCAACAGTATT
GTCAGAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCT
TCAACGGTTTCCTCTTTAACCACAACCATGTCAAATAATACAACAACGTC
CTATACGACAGGAAGAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAA
CTACGACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACA
CGGGCCGTCATTACACAAACAACTCCTCCTGAGACAACAACGACCATATC
TACTCCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGA
CATCGACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATGAACCCA
TGTTGCACAGAGCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATAT
CCGATCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATT
CAACAGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCA
CCAACACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTTATT
TCTTTCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:122213..127637 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 682-1473:793 |
| Aaloc | 592-678:1141 |
| Aaloc | 415-588:1896 |
| Aaloc | 298-411:2719 |
| Aaloc | 136-294:4513 |
| Aaloc | 40-132:5043 |
| Aaloc | 1-36:5426 |
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