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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:163230..169637- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039092 ID=XLOC_039092|Name=XLOC_039092|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6408bp|location=Sequence derived from alignment at sc0000041_pilon:163230..169637- (Clytia hemisphaerica_ch_hm2_pilon) ATGGAGCCAACACCACCTAAAGGTTCTCGTAACAAGAGATTTGCACAAAA
TAGACCTTTCTATGAATCCTCAAAGAAGACAAGTGCTGAAATCATCTCTG
AAGCAAGGTCAACAGTGCGACCGTTACAAACTAGAAGACCAGAAACACCA
TTAGATTTGAACAATAGAACTCTTTTTGGGAAGCAAAGAGAAGGAAGACC
TCCATCTGCTGTTAGGTTGGGATCCATTGTTCTGACTACATGACATTAAA
TCTGCAACTTTCTCAGAAAACCTGTCAATGGAATTTGAAAATTTTTTATC
TCAAAATTTGTGCATTAAGTTTCATTTATTTAATATTCAAACTCGAAACG
GAAATCCACTTTATTCGAATAACAGAGAGATTCGAGTTATTTGTTGAAGG
GACTGGGATTGACTTCAAATTATATAAACACTCATATAATATAAGTGGAT
GGTTAAAACTTGATTTCAGTCAGTTATATTTATTACAACTTTTTTCATTA
TTTCAGCATTTCATCTTCTTTCCATGATTCAAGACCACCTTCGGGTAAAG
GAAAGCTGACACCACTTGCAAATGTTCCTGATTTCAAAGAACTAGAATTA
AGACTTGAAGAAAAATTCACCATTGACAAAAATGTAAGATTCATAAGGTT
TATGATGAAATTCTTCTAGTTAAAAGAAACAACAGATGTTAAGGATAGAT
GGAATATTATTTTGGAGTAAAGGTTCCCGATAAACTTACTTTCTTCAATT
GAAATCTTGCAAAAGTTTGTCATCTTTTTTTCTAAGAATGTTTATCCATG
CTTTTATGGGGATATGGCAAACTCAGAGTTTTGTTTTCAATAATCTCTGC
TATAACAGAGTCTTATTGCTATTTGATTTGAGATTTTGTCTCTTATTTTC
TCAGTCAAATGAGATTGGCAATGACAACAACAACAACAATAATTCAGCCA
AAAAGCAAATGAAAATTAAAGGAAATATCATTCCAAAGAGTGCTGAACCA
TCATTTTCCCGAGCAAGACGTTCAATCAAATCCTCTAAAGTAGTCGAAGA
AAGACGTGTGCACAGCGGACCTAAAGAACGACCTCCAATATTTAGAGATG
ATGATTTGAAACGATCAAACTCGTACAGTGATTTGACCTCAACTGACGAG
AAAGTGACTGAAACGAAACATTCTTCGAACGAACAAATTGACTCTGATTC
ATTTTACAATACTAATATTGAACCGTTAATAAACCAAATGCATTTGAACT
ATGAGTATGGAGATATAGAATCGCTATTGGTTAATTTGGATTTTTTATGG
AGAGTCTTGGAAGTCAGTAACATGGTTGGTCAAAATGCAAAAATAGCAAG
GGAACACAGAGCAGCAATATTGACGAAACTAAGTAGCTATGTGAATAATA
AAAATGCTTTATTGCAGCTGAGGATTTGTAAACTATACTTAGGGGTAAGT
AGTATCGTCAGTTTTCTTTTGAAGCTTTCATATGACTTGCACGTGATCCA
CAATGGCGAAAAAATGTTTACCAAAAATTTTAGACTAACTGATCCAAGGC
CGAGTTTTGACTATTGAAATCTCTAAAAAGGGTTTCTACATAGTTGTTAC
GTCCAAATTCCAATGTTTTCTTGCTAAAGTCAAAAACGTGTAACTGCTCA
GCTAACATTATTTTTGTTTGATTATTTCAGCTCAAAGTGACGAAAAGGAA
TTTGAGTGCAGTTTGTAAAAGCTTCTATCAAGTCACCAAGAATGAAAAGA
ATGATGATATGGTTCTCCAAGAGAAAATGATTGGTAAATTGTGCCTCTAA
AATTAAATATTTGCAGGAGCCGATTTCCTCTATCTGTTTTTTGAGAAACT
GTCTCTTTCCATTGTCAAGGCAAGTCCTAATGTAAGGTTCTTTTCAAATA
AAGCCTTCTTTATTAAAGTATAAATTTCTATAGGTACAGTTACAACTTTT
TCTTATTTCCAAATACATTTAAGGGATCAAACTGTCCATACTGAGGGTAA
GAATATAAAATATGTGAATTACTTGAAAACTGGATATTGTGTATTTGTTT
TCATTTATTTTTCGTCTGATAGAGCCTATACTCACCATCTTAAACAACCC
CGAACAAGTGGACTCGACTACAGATTTGGTATATTTGGTCGGTGCACTCA
AGATCCTCTCAAATCAACCGAAATGTTCAAAAGAAATAAGATTACTGGAT
TTATTAACACCCCTCAAATGTTTGTTACAGTTCTCTGTTAAAAAGGTAAG
CTTATACGATTCTACCACTATTTTTACAATGTAAACTAAGATGGTTGGCT
TTCCTTTTGACTCGGTTCGTTTTAAGATACAATGGAAAACTCGGCACTTC
GAATCTCGTCTTGAAAAATACTGAAAGAAGGTATTGGACCTTTCGTAAAG
AAAGGATATGTTGGTTATAATGTATAGCAATGGTTGTTAATGTGATGATT
AATCTTTAAACAATCGCTCTGAAAGAAGTTTCTACTAACCTTCTGTTTCG
TCTTAGTACACTTCTGCTGTTCAAATCAAGGAAAGTAACCACATGCTTAT
CCAGGTAGGCGTAACCAGTCTCTTGTTTCATATGTCATATGGAGACATTG
CAGTGACTTCAAATGAGGTTCCTAAAAGTGGAATTACAAGAAACCTTTTT
CAGTGGCAAAATTATCGAAAATTTGAATCCAAAATATTGCCAGTGCCATA
AATGAACGCAATCATTCTTTTTACTTTGAAAGCCTTTTACGCATGTTTTT
AATACCCATTCGTCAATGTTCTCAGGCTTCTTCGCTGTTGAACAACTTGG
CAGATTCTGCCACGTTAGCCAATCAATTCATCGAGAATAATATTCTCCAA
CTATTGATGGATCTGATGAAAGCAAGGCTGGATGATGTGGATTTGATCAT
GCCTATCGCAAGCATTTTCAGGTAATCAATTGCCCACCCCACCATTAATG
TTTGATCCTGACCTAAAACTACTTATCCATCAACCAAGTCAACTTGTTGA
GAGGTTGTTTATGCTTGGTTAAGATCCGTACTTTCTGTCCAACGTTCAAT
AGTTGATCTAACGGATCGCCTCTACAGATTCGAACGTTTGTTTCCATAAT
AGCAGAAATTACGTAACTTAACCAAACACGATAAACCTCTACACTTTAAT
TGTATTGTGTTGAAATCGAAAAAGCAACTCTTTATGCTGTTACCGTCCTA
CTTCAAATCAAGGTCGGATTTACCGATTTACTCGAAAACGTTTGGATGTT
TCTTGACCGGTTTTTTATTCGTTATTTCTTAGCAAATTGACGATATCAGA
AAGCATTTGCAACAACGTTGTGGAAGTAGAATCAAACCCTGGCTTGTTGA
TGAATACTTTGATAAAACACACAAATACACAGGTTTGTTCAACTCCGAAT
GAACGTCAAAACAACGACAAACCAACCTCATAACATCCATTTAACTTTAG
ACGTAAACAACATTGTATGCTGTGTTTGTTTTACTAAGCTGTTTCAAAAT
CACTTGTCAATGCTCCATAAAAAGATCTCAATTTACTTTCGAGGCTTCAA
TCTTCATTTGTTTTTTGATTTCAGGAAATAGTAGTTCGATTTGGATACGC
CTTTGGCAATATGGCCAACCACTCACCAAAGTTTCGAGATATTATTCTCT
CATCAAATGATATGACAAAAAATTTTGTCAAAGTCATCCGTTTTTATACT
AAAAAGCTGAGAAAGGTGTGTTTTTTATATGAAACGGGCCAAATTCTTTT
AAAGCAACTGGTAACCTTTAAAAACAAGTCATTCTTCATTTTACCACACA
GGAAATCATGTGTACTTTATTTTCACCATTGACAGGCTTTCTTTCTTGTT
TTCCAATCCCTGTCTCAAAGCTCGATTCCTTGAAGGCGAACAGTGTTCGC
TGGTTATGATCATTGGAGAATGGGCAAGATTCTCTTCTTTATTAATGTTT
TTCGTGAAATAGACTACACAGTTTTAAGATTACAAAATTCTCTCCTTTCA
TAGGATCGTTCACAGACAGACCTTACTGAAAGTTCGAAAGAATGTGAAGA
AGATGAAGATGTCCTTGTCAAGGTCTGTCTCTTGCTCCTTATTTCGACAA
ATTTCTCCTAACAAATAATAAATTTGCTATCTTTGATATCTCGGAAAATT
AGCATTTCTAAATTTCAGTTTTTAAGATAAAAAGATGGTTGAGTCGGTTA
GTTAATTAAGTATAGGGGGTTTCGCTCGACTTTGCACCTGCCAACATAAC
AATCAAGAATTTTTGGATCAGCAATTAATAACGAGTTTAATAACAGTACC
TTTTATATGATAAACCAATCACCTGTTTGTCGTTACCACACCGTTACGGC
CTTTTGACTTAATTCTTTTTCTCATCCGGGTCAAATCTGTATAAGTTTGT
GAGAATGATACCGCAAGGTTTCTCAGATTTCCATAGTGTTTTTGCCCATA
ATTTCGAATATTTTGACCCGTGGGAATTGAAATTAATCCTGTGATGAAAT
GAAAATGTCAATATAGGATTGGAAATTTCAAGTGGTTCCATAAGCATTTA
TTTATTGTATTGGTAGTTTTTATTTGTATCTCACTTTAGATTTCGAAAGC
CAAGGGTGTTTACTTGTCGAGCCAGTTATGAAGAGGTCGAGTAAGGTAGG
CAAAATAGCCTAAAGAATCTCTCAGCTGGCAATGGTCTGAGTTTTCAACA
GATTCCAATCATGAAGGTTTAAGTCTTGAAGACTCGAATATAAGTAGGGC
ATAAGATCACGAACGAAGAATATTATCAATTGATAAGCCTTAACGTATCT
ATCCTTAACATTTTCATTTCAGAGAATTGTGATCTATTGAAATTGTCGCA
AGAACTCATCATCAATACGTCAGCAACGGTCAACAATATGTCTTTCTTCA
ACGATCCAGACAGTATTCTAGTCAAAAATACCGAGACCTTTACCCGTGGT
AAGTACATGAGAATTATTATCAAAATTTATCTGTTGTAGGACTTGCCTTG
TTATTTCTTCTTATTTCTTTTCATCGTGGAGTCGTGGAAGGTAGTAAAAA
GAAAATACGGGGGATGAGGATGACGAGAAGGACATCATTAGGTATTATAA
ACGACTCTCAGCAAAGGGAAGGTTCCGCCGCTTATCGCTTAGAGACAAGC
TGAATTTCATGGAAGAAATGTAATTAACTTTCCATATCGCCATCTCTATC
CATAATTCATAATAGAGACTGATGTTGTTCAACCTCGTTCCCTGTGTATT
ATCGGTTTTTTGATACTTCCTGATAACGCCTGAAAAGTTAGAGAATACCC
TGGTAATGTCTGTTTTTCGAATCCAAAAGATACGCAATTCAATAACAAAT
TTTTATTATGTAGTGTAGTTTTTGTTAGTAATATCGATGAATATTTTAAA
AAAAATTATAGTAAAAAAAAAAAATTCAACAACAAGACGTCAGATTTTTA
TGGCGTATAGTTTTATTCTTTGGCGTAAATAAAGTCTGGGGACGGGGTTG
ACTGAAGTTATTTTCTTTCAACTTAATGATAATTCATTTTCACCATTTTT
TTTACGTTTAGCATTTTTGGACATAGTGCTGACAAAGAATCAAGACTGTT
GTGTAGAAGCCATGAGAGCTTTAGGGAACTTTACTCAAAGCGAAGATTCG
AGACGTCTTTTAGTCGAAGGCAGAGGTAAAAATTCGCCTTTTAAAAATCA
AAAAATTATGCCATCCTTTTTAGCATGAAAATTCATCCAAAATTCTAGAT
AAAATTCCAGACGCTTGGAATCAAGCTATGCTTGGAGCTCGTCACATTAA
CAGCTGTTATTTAAGGGAGTTTTCAAAGTCCTTTAATATACAGGTAAGGT
TTGGAAAGTTACCGTTGACTTCCTAGCTAAGAGAAGTTCTTTCTAACTTC
GTAGGTAACATAATAAAATATTTTAAAATCGTTATCACATTTCAATACTT
TCTAGTCTAAACAATCGAATGTCTTTAAAGATAAATAATAAGTAGTGGAT
AAAAACTGTAACTGTATAAAAGTGATCGAGATTCAGGTAAATTTAAATAC
AGCTTACACTCTCTAATTCGACGTTCTACTATTAGATACGCTCCATAATT
CGATAATATTGAATGGAACCATCAACAAGAAACTCTCGTAAACGACGCAA
TACTATTCGATATGCTCTATATTCGATGAAAATCCGATTGCCCTTGAAAT
TCGAATTAGGGAGCGTCAAATGTATTTCTAAAAAGACTTACTCATCTTTT
CCCCATTTCCCGTAGGATTACAAGCAATAATAATGTTGTTGGATTCGAGT
AGTATCGATCTCGCGTTCTGTGTATGTGGAGTGTTGATTAATATGATGGT
CGATCGGTCGACGCGAACTCTCATCAAAAACGACCAACAAACTATATCAA
AGTATGTT Coding sequence (CDS) from alignment at sc0000041_pilon:163230..169637- >XLOC_039092 ID=XLOC_039092|Name=XLOC_039092|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4428bp|location=Sequence derived from alignment at sc0000041_pilon:163230..169637- (Clytia hemisphaerica_ch_hm2_pilon) ATGGAGCCAACACCACCTAAAGGTTCTCGTAACAAGAGATTTGCACAAAA TAGACCTTTCTATGAATCCTCAAAGAAGACAAGTGCTGAAATCATCTCTG AAGCAAGGTCAACAGTGCGACCGTTACAAACTAGAAGACCAGAAACACCA TTAGATTTGAACAATAGAACTCTTTTTGGGAAGCAAAGAGAAGGAAGACC TCCATCTGCTGTTAGATGGAGCCAACACCACCTAAAGGTTCTCGTAACAA GAGATTTGCACAAAATAGACCTTTCTATGAATCCTCAAAGAAGACAAGTG CTGAAATCATCTCTGAAGCAAGGTCAACAGTGCGACCGTTACAAACTAGA AGACCAGAAACACCATTAGATTTGAACAATAGAACTCTTTTTGGGAAGCA AAGAGAAGGAAGACCTCCATCTGCTGTTAGCATTTCATCTTCTTTCCATG ATTCAAGACCACCTTCGGGTAAAGGAAAGCTGACACCACTTGCAAATGTT CCTGATTTCAAAGAACTAGAATTAAGACTTGAAGAAAAATTCACCATTGA CAAAAATCATTTCATCTTCTTTCCATGATTCAAGACCACCTTCGGGTAAA GGAAAGCTGACACCACTTGCAAATGTTCCTGATTTCAAAGAACTAGAATT AAGACTTGAAGAAAAATTCACCATTGACAAAAATAGTTTTGTTTTCAATA ATCTCTGCTATAACAGAGTCTTATTGCTATTTGATTTGAGATTTTGTCTC TTATTTTCTCAGTCAAATGAGATTGGCAATGACAACAACAACAACAATAA TTCAGCCAAAAAGCAAATGAAAATTAAAGGAAATATCATTCCAAAGAGTG CTGAACCATCATTTTCCCGAGCAAGACGTTCAATCAAATCCTCTAAAGTA GTCGAAGAAAGACGTGTGCACAGCGGACCTAAAGAACGACCTCCAATATT TAGAGATGATGATTTGAAACGATCAAACTCGTACAGTGATTTGACCTCAA CTGACGAGAAAGTGACTGAAACGAAACATTCTTCGAACGAACAAATTGAC TCTGATTCATTTTACAATACTAATATTGAACCGTTAATAAACCAAATGCA TTTGAACTATGAGTATGGAGATATAGAATCGCTATTGGTTAATTTGGATT TTTTATGGAGAGTCTTGGAAGTCAGTAACATGGTTGGTCAAAATGCAAAA ATAGCAAGGGAACACAGAGCAGCAATATTGACGAAACTAAGTAGCTATGT GAATAATAAAAATGCTTTATTGCAGCTGAGGATTTGTAAACTATACTTAG GGAGTTTTGTTTTCAATAATCTCTGCTATAACAGAGTCTTATTGCTATTT GATTTGAGATTTTGTCTCTTATTTTCTCAGTCAAATGAGATTGGCAATGA CAACAACAACAACAATAATTCAGCCAAAAAGCAAATGAAAATTAAAGGAA ATATCATTCCAAAGAGTGCTGAACCATCATTTTCCCGAGCAAGACGTTCA ATCAAATCCTCTAAAGTAGTCGAAGAAAGACGTGTGCACAGCGGACCTAA AGAACGACCTCCAATATTTAGAGATGATGATTTGAAACGATCAAACTCGT ACAGTGATTTGACCTCAACTGACGAGAAAGTGACTGAAACGAAACATTCT TCGAACGAACAAATTGACTCTGATTCATTTTACAATACTAATATTGAACC GTTAATAAACCAAATGCATTTGAACTATGAGTATGGAGATATAGAATCGC TATTGGTTAATTTGGATTTTTTATGGAGAGTCTTGGAAGTCAGTAACATG GTTGGTCAAAATGCAAAAATAGCAAGGGAACACAGAGCAGCAATATTGAC GAAACTAAGTAGCTATGTGAATAATAAAAATGCTTTATTGCAGCTGAGGA TTTGTAAACTATACTTAGGGCTCAAAGTGACGAAAAGGAATTTGAGTGCA GTTTGTAAAAGCTTCTATCAAGTCACCAAGAATGAAAAGAATGATGATAT GGTTCTCCAAGAGAAAATGATTGCTCAAAGTGACGAAAAGGAATTTGAGT GCAGTTTGTAAAAGCTTCTATCAAGTCACCAAGAATGAAAAGAATGATGA TATGGTTCTCCAAGAGAAAATGATTGAGCCTATACTCACCATCTTAAACA ACCCCGAACAAGTGGACTCGACTACAGATTTGGTATATTTGGTCGGTGCA CTCAAGATCCTCTCAAATCAACCGAAATGTTCAAAAGAAATAAGATTACT GGATTTATTAACACCCCTCAAATGTTTGTTACAGTTCTCTGTTAAAAAGA GCCTATACTCACCATCTTAAACAACCCCGAACAAGTGGACTCGACTACAG ATTTGGTATATTTGGTCGGTGCACTCAAGATCCTCTCAAATCAACCGAAA TGTTCAAAAGAAATAAGATTACTGGATTTATTAACACCCCTCAAATGTTT GTTACAGTTCTCTGTTAAAAAGTACACTTCTGCTGTTCAAATCAAGGAAA GTAACCACATGCTTATCCAGTACACTTCTGCTGTTCAAATCAAGGAAAGT AACCACATGCTTATCCAGGCTTCTTCGCTGTTGAACAACTTGGCAGATTC TGCCACGTTAGCCAATCAATTCATCGAGAATAATATTCTCCAACTATTGA TGGATCTGATGAAAGCAAGGCTGGATGATGTGGATTTGATCATGCCTATC GCAAGCATTTTCAGGCTTCTTCGCTGTTGAACAACTTGGCAGATTCTGCC ACGTTAGCCAATCAATTCATCGAGAATAATATTCTCCAACTATTGATGGA TCTGATGAAAGCAAGGCTGGATGATGTGGATTTGATCATGCCTATCGCAA GCATTTTCAGCAAATTGACGATATCAGAAAGCATTTGCAACAACGTTGTG GAAGTAGAATCAAACCCTGGCTTGTTGATGAATACTTTGATAAAACACAC AAATACACAGCAAATTGACGATATCAGAAAGCATTTGCAACAACGTTGTG GAAGTAGAATCAAACCCTGGCTTGTTGATGAATACTTTGATAAAACACAC AAATACACAGGAAATAGTAGTTCGATTTGGATACGCCTTTGGCAATATGG CCAACCACTCACCAAAGTTTCGAGATATTATTCTCTCATCAAATGATATG ACAAAAAATTTTGTCAAAGTCATCCGTTTTTATACTAAAAAGCTGAGAAA GGAAATAGTAGTTCGATTTGGATACGCCTTTGGCAATATGGCCAACCACT CACCAAAGTTTCGAGATATTATTCTCTCATCAAATGATATGACAAAAAAT TTTGTCAAAGTCATCCGTTTTTATACTAAAAAGCTGAGAAAGGATCGTTC ACAGACAGACCTTACTGAAAGTTCGAAAGAATGTGAAGAAGATGAAGATG TCCTTGTCAAGGATCGTTCACAGACAGACCTTACTGAAAGTTCGAAAGAA TGTGAAGAAGATGAAGATGTCCTTGTCAAGACTCGAATATAAGTAGGGCA TAAGATCACGAACGAAGAATATTATCAATTGATAAGCCTTAACGTATCTA TCCTTAACATTTTCATTTCAGAGAATTGTGATCTATTGAAATTGTCGCAA GAACTCATCATCAATACGTCAGCAACGGTCAACAATATGTCTTTCTTCAA CGATCCAGACAGTATTCTAGTCAAAAATACCGAGACCTTTACCCGTGACT CGAATATAAGTAGGGCATAAGATCACGAACGAAGAATATTATCAATTGAT AAGCCTTAACGTATCTATCCTTAACATTTTCATTTCAGAGAATTGTGATC TATTGAAATTGTCGCAAGAACTCATCATCAATACGTCAGCAACGGTCAAC AATATGTCTTTCTTCAACGATCCAGACAGTATTCTAGTCAAAAATACCGA GACCTTTACCCGTGCATTTTTGGACATAGTGCTGACAAAGAATCAAGACT GTTGTGTAGAAGCCATGAGAGCTTTAGGGAACTTTACTCAAAGCGAAGAT TCGAGACGTCTTTTAGTCGAAGGCAGAGCATTTTTGGACATAGTGCTGAC AAAGAATCAAGACTGTTGTGTAGAAGCCATGAGAGCTTTAGGGAACTTTA CTCAAAGCGAAGATTCGAGACGTCTTTTAGTCGAAGGCAGAGGATTACAA GCAATAATAATGTTGTTGGATTCGAGTAGTATCGATCTCGCGTTCTGTGT ATGTGGAGTGTTGATTAATATGATGGTCGATCGGTCGACGCGAACTCTCA TCAAAAACGACCAACAAACTATATCAAAGTATGTTGATTACAAGCAATAA TAATGTTGTTGGATTCGAGTAGTATCGATCTCGCGTTCTGTGTATGTGGA GTGTTGATTAATATGATGGTCGATCGGTCGACGCGAACTCTCATCAAAAA CGACCAACAAACTATATCAAAGTATGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000041_pilon | genome | sc0000041_pilon:163230..169637 - |
Properties
| Property Name | Value |
| Aaloc | 2077-2217:142 |
| Aaloc | 1963-2073:846 |
| Aaloc | 1834-1959:1588 |
| Aaloc | 1738-1827:1678 |
| Aaloc | 1669-1737:2406 |
| Aaloc | 1528-1668:2835 |
| Aaloc | 1429-1527:3126 |
| Aaloc | 1282-1425:3634 |
| Aaloc | 1234-1281:3903 |
| Aaloc | 1063-1233:4335 |
| Aaloc | 958-1059:4729 |
| Aaloc | 403-957:5520 |
| Aaloc | 343-402:5583 |
| Aaloc | 217-342:5902 |
| Aaloc | 1-213:6409 |
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