|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:241479..243248+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039090 ID=XLOC_039090|Name=XLOC_039090|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1770bp|location=Sequence derived from alignment at sc0000041_pilon:241479..243248+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGAACCCAGCACTCCTTCTAAAGATGAGCCACAACAAGTGATCCCTGT
CGCTGGTGTTCCACCGTTCATCCCTGGCTTCCCTCCCGGtttttttCCAC
CTGCTGGTCTATTACCGGGCATGCCACCTGCCGGACTCTCTGGACGCCTA
CCGTTTCCTGGTATGCTCCCACCTAATATTTTGCAGCTACAGAATCTTCA
ACGTCAATCTATTCAAGGGCTCGTTGGTGGTGAGAGGCCTCAACTTCAAG
GCTTAGGAGAACGACCTCCCCTTCAACCTGGTCTTCAGCAAGGAATGGGC
GAAAGACCTCCCCTTCAACCTGGTCTTCAGCAAGGAATGGGCGAAAGACC
TCCTCTTCAGGGTATGCCAAGACCACCTATTCAAGGTCTTGGTGAACGAC
CACCCtttcaaaacatggctgagagACCACCTTTTCAAAATATGGGCGAG
AGACCACCCTTTCAACAAAATATCGGTGAGCGCCCTCTGCTCCAACAAAA
TAACATGGGTGAACGCCCTCCTCTTCAAGGGCTAGGCCAAAGACCGCCTT
TTCAAAATATGGGTGACAGACAATCACTTTTACAAAGCTTGGGTCAACAA
CCTCGCCCCGGTTTCGGAGAACACCCACAAAGACCAGGTTTTGATGAGAA
TCGCCCACGCCCTGGACAGCCAATGGGTGGCCCGCCACAAAGACCTAGCT
TCACCCCTGCTTTTGGCGGAGACAGTTTCCAAAATGTAAGGCCTCGGCAG
GAAGGACCAATTAGTCCAGGACTCAATAATATAAGACCCCCTGTTTCATT
CGGGGAACGTCCTCCTGTTCAAAGACATCTATTTGGAGGAAATCTCTTAT
TCAATGGCTTGAATCAACGCCCTCAAATCCAAAACTTACTGAGTCAAAAC
CAACGTTTCAATGGTCCGCCTGAGAACAGATTCACCAATATACGACCAGT
TGCTCCTGAAGAATCCCAGATATCTCCCAATGCACAAGATGCTGGACAAA
GGCCACCATGGTTGCAAAATCGTGACCAGGTTGGTAACATGGGAAATCAA
CCAAGTAGAAACGAGGAAACAGTGGAGAAGAATGTCCAAAATCAGAGAAA
CTTGACGAACCTGCCAACAGCTGCTTTCTTGCTCAATCTTGTGAACCAAC
ACAAGGAACAACAAGCCTCAACTGATAACCAGACGCAACCTGGAGATGAA
GAATCACAACCACCGCCACAAAGAGAACGTGAAAGGTCTCCTACTCGTGA
TAGATCACCCGTGCGTGATGACCGTGACCGTGAGAGAGGCGATCGGAGAC
GTGAGAGAAGTCGTGAACGTAGAGATAGTGATCGTGACCATCGCGGAAGA
CGTGATCGCAGCTCTGAGCGCAGCAGTCGTAGCCGGCGTGATGACCGCGG
GCGGGAGCGTGATTATCGTGGTAGTGATCGGGAGAGAGGTAGTGACCGTG
ATCGCGATGAACGTGGTCGGGGAAGTGATCGTGATGAAAGAAGTCGCAGA
AGTGACCGCGATCGAAGCGGTGATCGTAGAAGAGAGCGAAGCAGTGAACG
AAAATCCGATCGAGATCGTTATGAAAGACGTGGTCGGGACGAAGATCGTT
ATCGTAGTCGGGATAGACGAGAAAGGAGTCGGGAACGTGGAAGAGATAGG
GACAGAAGTCAAGAGGAAAGTCGCGAGAGGAACGAAGATGAGTTATCGGC
CAGTCGTAGTGAGAGTGCAAAGAAACAAGATGAGGTTACCAGCGGAGATA
CTGTCGTTGCTACTGACCAA Coding sequence (CDS) from alignment at sc0000041_pilon:241479..243248+ >XLOC_039090 ID=XLOC_039090|Name=XLOC_039090|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3456bp|location=Sequence derived from alignment at sc0000041_pilon:241479..243248+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGAACCCAGCACTCCTTCTAAAGATGAGCCACAACAAGTGATCCCTGT
CGCTGGTGTTCCACCGTTCATCCCTGGCTTCCCTCCCGGtttttttCCAC
CTGCTGGTCTATTACCGGGCATGCCACCTGCCGGACTCTCTGGACGCCTA
CCGTTTCCTGGTATGCTCCCACCTAATATTTTGCAGCTACAGAATCTTCA
ACGTCAATCTATTCAAGGGCTCGTTGGTGGTGAGAGGCCTCAACTTCAAG
GCTTAGGAGAACGACCTCCCCTTCAACCTGGTCTTCAGCAAGGACGAACC
CAGCACTCCTTCTAAAGATGAGCCACAACAAGTGATCCCTGTCGCTGGTG
TTCCACCGTTCATCCCTGGCTTCCCTCCCGGtttttttCCACCTGCTGGT
CTATTACCGGGCATGCCACCTGCCGGACTCTCTGGACGCCTACCGTTTCC
TGGTATGCTCCCACCTAATATTTTGCAGCTACAGAATCTTCAACGTCAAT
CTATTCAAGGGCTCGTTGGTGGTGAGAGGCCTCAACTTCAAGGCTTAGGA
GAACGACCTCCCCTTCAACCTGGTCTTCAGCAAGGAATGGGCGAAAGACC
TCCTCTTCAGGGTATGCCAAGACCACCTATTCAAGGTCTTGGTGAACGAC
CACCCtttcaaaacatggctgagagACCACCTTTTCAAAATATGGGCGAG
AGACCACCCTTTCAACAAAATATCGGTGAGCGCCCTCTGCTCCAACAAAA
TAACATGGGTGAACGCCCTCCTCTTCAAGGGCTAGGCCAAAGACCGCCTT
TTCAAAATATGGGTGACAGACAATCACTTTTACAAAGCTTGGGTCAACAA
CCTCGCCCCGGTTTCGGAGAACACCCACAAAGACCAGGTTTTGATGAGAA
TCGCCCACGCCCTGGACAGCCAATGGGTGGCCCGCCACAAAGACCTAGCT
TCACCCCTGCTTTTGGCGGAGACAGTTTCCAAAATGTAAGGCCTCGGCAG
GAAGGACCAATTAGTCCAGGACTCAATAATATAAGACCCCCTGTTTCATT
CGGGGAACGTCCTCCTGTTCAAAGACATCTATTTGGAGGAAATCTCTTAT
TCAATGGCTTGAATCAACGCCCTCAAATCCAAAACTTACTGAGTCAAAAC
CAACGTTTCAATGGTCCGCCTGAGAACAGATTCACCAATATACGACCAGT
TGCTCCTGAAGAATCCCAGATATCTCCCAATGCACAAGATGCTGGACAAA
GGCCACCATGGTTGCAAAATCGTGACCAGGTTGGTAACATGGGAAATCAA
CCAAGTAGAAACGAGGAAACAGTGGAGAAGAATGTCCAAAATCAGAGAAA
CTTGACGAACCTGCCAACAGCTGCTTTCTTGCTCAATCTTGTGAACCAAC
ACAAGGAACAACAAGCCTCAACTGATAACCAGACGCAACCTGGAGATGAA
GAATCACAACCACCGCCACAAAGAGAACGTGAAAGGTCTCCTACTCGTGA
TAGATCACCCGTGCGTGATGACCGTGACCGTGAGAGAGGCGATCGGAGAC
GTGAGAGAAGTCGTGAACGTAGAGATAGTGATCGTGACCATCGCGGAAGA
CGTGATCGCAGCTCTGAGCGCAGCAGTCGTAGCCGGCGTGATGACCGCGG
GCGGGAGCGTGATTATCGTGGTAGTGATCGGGAGAGAGGTAGTGACCGTG
ATCGCGATGAACGTGGTCGGGGAAGTGATCGTGATGAAAGAAGTCGCAGA
AGTGACCGCGATCGAAGCGGTGATCGTAGAAGAGAGCGAAGCAGTGAACG
AAAATCCGATCGAGATCGTTATGAAAGACGTGGTCGGGACGAAGATCGTT
ATCGTAGTCGGGATAGACGAGAAAGGAGTCGGGAACGTGGAAGAGATAGG
GACAGAAGTCAAGAGGAAAGTCGCGAGAGGAACGAAGATGAGTTATCGGC
CAGTCGTAGTGAGAGTGCAAAGAAACAAGATGAGGTTACCAGCGGAGATA
CTGTCGTTGCTACTGACCAAGAATGGGCGAAAGACCTCCTCTTCAGGGTA
TGCCAAGACCACCTATTCAAGGTCTTGGTGAACGACCACCCtttcaaaac
atggctgagagACCACCTTTTCAAAATATGGGCGAGAGACCACCCTTTCA
ACAAAATATCGGTGAGCGCCCTCTGCTCCAACAAAATAACATGGGTGAAC
GCCCTCCTCTTCAAGGGCTAGGCCAAAGACCGCCTTTTCAAAATATGGGT
GACAGACAATCACTTTTACAAAGCTTGGGTCAACAACCTCGCCCCGGTTT
CGGAGAACACCCACAAAGACCAGGTTTTGATGAGAATCGCCCACGCCCTG
GACAGCCAATGGGTGGCCCGCCACAAAGACCTAGCTTCACCCCTGCTTTT
GGCGGAGACAGTTTCCAAAATGTAAGGCCTCGGCAGGAAGGACCAATTAG
TCCAGGACTCAATAATATAAGACCCCCTGTTTCATTCGGGGAACGTCCTC
CTGTTCAAAGACATCTATTTGGAGGAAATCTCTTATTCAATGGCTTGAAT
CAACGCCCTCAAATCCAAAACTTACTGAGTCAAAACCAACGTTTCAATGG
TCCGCCTGAGAACAGATTCACCAATATACGACCAGTTGCTCCTGAAGAAT
CCCAGATATCTCCCAATGCACAAGATGCTGGACAAAGGCCACCATGGTTG
CAAAATCGTGACCAGGTTGGTAACATGGGAAATCAACCAAGTAGAAACGA
GGAAACAGTGGAGAAGAATGTCCAAAATCAGAGAAACTTGACGAACCTGC
CAACAGCTGCTTTCTTGCTCAATCTTGTGAACCAACACAAGGAACAACAA
GCCTCAACTGATAACCAGACGCAACCTGGAGATGAAGAATCACAACCACC
GCCACAAAGAGAACGTGAAAGGTCTCCTACTCGTGATAGATCACCCGTGC
GTGATGACCGTGACCGTGAGAGAGGCGATCGGAGACGTGAGAGAAGTCGT
GAACGTAGAGATAGTGATCGTGACCATCGCGGAAGACGTGATCGCAGCTC
TGAGCGCAGCAGTCGTAGCCGGCGTGATGACCGCGGGCGGGAGCGTGATT
ATCGTGGTAGTGATCGGGAGAGAGGTAGTGACCGTGATCGCGATGAACGT
GGTCGGGGAAGTGATCGTGATGAAAGAAGTCGCAGAAGTGACCGCGATCG
AAGCGGTGATCGTAGAAGAGAGCGAAGCAGTGAACGAAAATCCGATCGAG
ATCGTTATGAAAGACGTGGTCGGGACGAAGATCGTTATCGTAGTCGGGAT
AGACGAGAAAGGAGTCGGGAACGTGGAAGAGATAGGGACAGAAGTCAAGA
GGAAAGTCGCGAGAGGAACGAAGATGAGTTATCGGCCAGTCGTAGTGAGA
GTGCAAAGAAACAAGATGAGGTTACCAGCGGAGATACTGTCGTTGCTACT
GACCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:241479..243248 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 295-1728:337 |
| Aaloc | 1-291:1 |
|
