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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000289_pilon:328109..329788+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039077 ID=XLOC_039077|Name=XLOC_039077|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1680bp|location=Sequence derived from alignment at sc0000289_pilon:328109..329788+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGTAATGGGATGCCCTAACCTTATTATCGCCGTCGACCACGAGTC
TCTGGTACCAATATTTAACAAAAGAGAATTGTTCGAGCTAAAAAACCCAA
GACTGTTAGACATCAGAGAAAAGACTCTAATGTATAACTTCCAAGTAATC
CACATCCCGGGCAAGAAAAACGTAGGTGCAAACTTCATGTCCCGGATACC
GCTTTCACCACCGTCAAACACCTCTGATAAGATCGAGGCTGCTATCTCGG
CTTCTATCCACCTCCGTTTCAACCAAAGCAACTCGTGTTCCCTTGAGGAC
ATCTCACGCAAAGCCTCTGAAGACCCCGAGTACATAGATCTCCACCGTAC
AATTCTCGAGGGGTTTCCAACCAACAAGGAAACTTTACCACAACACATCT
TACCCTActggaaattgaaaaatgacttATATTGTGTAGACAATCTAATT
ATGCTTGACGATCGCGTCCTGATACCACGCGCTCTTCGACGTACCCTACT
AGAAGAGTTACACATCGGACACCAAGGCGTCAGCGCAATGAGAGAAAACG
CAAAGAGACGATTCTTTTGGCCACAAATGAGCTCACACATACAAAATCAC
AGGAATCAATGCACCCGATGCAACCAAATCGCACCCTCAAATCGCAAAGA
TACACCGGAAGTCCCCGATCCGCCGATTTATCCATTCCAACAGACTGTTG
CTGACCTCTTTCACATGGCAGGACGCCTGTATATCGTTTATGCAGATCGC
TTCTCCGGTTGGCCAGAGGTCGCCTCAACCAAACCTGATGCTACAGCTAC
CACGGTTATTAACATTCTCCGAAGATATTTCACGAATTTTGGCGTCCCCG
AAGAACTGTCATCAGACGGGGGTCCGCCATTCACATCTCACGAGTTCGAA
AACTTTCTAAGATCTTGGAACGTTTCACATCGAATATCATCTGTCGGCTA
CCCCCAAAGCAACGGACGAGCAGAAGCTGCAGTTAAGACTGTTAAACGGA
TATTAACGACCAATATTAGTCAATCTGGGTCACTGGACACCGATAATGTC
GCCAAAGCCCTTCTCCTGTACCGAAACACTCCATCACCAGACATGGGAGT
CTCACCTTCTGAGCTCCTATTTGGACGCAACATCAGAGACCATCTTCCAG
CACCAAGACGTTTCCGGAAAGAATGGATTGACCTAGCTGATATTCGCGAG
AACACTTTTACTAGAAGGCACCAACAAGCTTGCACGAAATCACAACGACA
CCTCCCTGATTTGAAAGTTGGAGACACTGTTTCCATTCAGAACCAAACTG
GTAACACTCCGCTTCGATGGGAAAAGACCGGGGTAATCAGCGAAAGTTTA
CCCCATCGACAATATCGTGTTGTAGTCGATGGTAGCCGCCGTACGACACT
ACGTAATAGACAGTTTTTACGCCCAATACCAAACGAAACACGCAACGATA
TCATCGATTTAGACATTCTACGACAAACAAAAGAAGAACATCTTCCCAAA
ACTAACGGGACAGATCTACCAGCACTCAATCAACCAGAAACAATTCCAAC
TGAACAAGAGACAACTCAGGCAGACACTTCACCCTCAATCGTCTGCCCTC
CGACACCCGTCATCCAAACAAGACGATCAACACGCACTAGAAGACCACCA
GAGAGATTTAAAGACTACGTTATGAAATAG Coding sequence (CDS) from alignment at sc0000289_pilon:328109..329788+ >XLOC_039077 ID=XLOC_039077|Name=XLOC_039077|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3360bp|location=Sequence derived from alignment at sc0000289_pilon:328109..329788+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGTAATGGGATGCCCTAACCTTATTATCGCCGTCGACCACGAGTC
TCTGGTACCAATATTTAACAAAAGAGAATTGTTCGAGCTAAAAAACCCAA
GACTGTTAGACATCAGAGAAAAGACTCTAATGTATAACTTCCAAGTAATC
CACATCCCGGGCAAGAAAAACGTAGGTGCAAACTTCATGTCCCGGATACC
GCTTTCACCACCGTCAAACACCTCTGATAAGATCGAGGCTGCTATCTCGG
CTTCTATCCACCTCCGTTTCAACCAAAGCAACTCGTGTTCCCTTGAGGAC
ATCTCACGCAAAGCCTCTGAAGACCCCGAGTACATAGATCTCCACCGTAC
AATTCTCGAGGGGTTTCCAACCAACAAGGAAACTTTACCACAACACATCT
TACCCTActggaaattgaaaaatgacttATATTGTGTAGACAATCTAATT
ATGCTTGACGATCGCGTCCTGATACCACGCGCTCTTCGACGTACCCTACT
AGAAGAGTTACACATCGGACACCAAGGCGTCAGCGCAATGAGAGAAAACG
CAAAGAGACGATTCTTTTGGCCACAAATGAGCTCACACATACAAAATCAC
AGGAATCAATGCACCCGATGCAACCAAATCGCACCCTCAAATCGCAAAGA
TACACCGGAAGTCCCCGATCCGCCGATTTATCCATTCCAACAGACTGTTG
CTGACCTCTTTCACATGGCAGGACGCCTGTATATCGTTTATGCAGATCGC
TTCTCCGGTTGGCCAGAGGTCGCCTCAACCAAACCTGATGCTACAGCTAC
CACGGTTATTAACATTCTCCGAAGATATTTCACGAATTTTGGCGTCCCCG
AAGAACTGTCATCAGACGGGGGTCCGCCATTCACATCTCACGAGTTCGAA
AACTTTCTAAGATCTTGGAACGTTTCACATCGAATATCATCTGTCGGCTA
CCCCCAAAGCAACGGACGAGCAGAAGCTGCAGTTAAGACTGTTAAACGGA
TATTAACGACCAATATTAGTCAATCTGGGTCACTGGACACCGATAATGTC
GCCAAAGCCCTTCTCCTGTACCGAAACACTCCATCACCAGACATGGGAGT
CTCACCTTCTGAGCTCCTATTTGGACGCAACATCAGAGACCATCTTCCAG
CACCAAGACGTTTCCGGAAAGAATGGATTGACCTAGCTGATATTCGCGAG
AACACTTTTACTAGAAGGCACCAACAAGCTTGCACGAAATCACAACGACA
CCTCCCTGATTTGAAAGTTGGAGACACTGTTTCCATTCAGAACCAAACTG
GTAACACTCCGCTTCGATGGGAAAAGACCGGGGTAATCAGCGAAAGTTTA
CCCCATCGACAATATCGTGTTGTAGTCGATGGTAGCCGCCGTACGACACT
ACGTAATAGACAGTTTTTACGCCCAATACCAAACGAAACACGCAACGATA
TCATCGATTTAGACATTCTACGACAAACAAAAGAAGAACATCTTCCCAAA
ACTAACGGGACAGATCTACCAGCACTCAATCAACCAGAAACAATTCCAAC
TGAACAAGAGACAACTCAGGCAGACACTTCACCCTCAATCGTCTGCCCTC
CGACACCCGTCATCCAAACAAGACGATCAACACGCACTAGAAGACCACCA
GAGAGATTTAAAGACTACGTTATGAAATAGATGTTTGTAATGGGATGCCC
TAACCTTATTATCGCCGTCGACCACGAGTCTCTGGTACCAATATTTAACA
AAAGAGAATTGTTCGAGCTAAAAAACCCAAGACTGTTAGACATCAGAGAA
AAGACTCTAATGTATAACTTCCAAGTAATCCACATCCCGGGCAAGAAAAA
CGTAGGTGCAAACTTCATGTCCCGGATACCGCTTTCACCACCGTCAAACA
CCTCTGATAAGATCGAGGCTGCTATCTCGGCTTCTATCCACCTCCGTTTC
AACCAAAGCAACTCGTGTTCCCTTGAGGACATCTCACGCAAAGCCTCTGA
AGACCCCGAGTACATAGATCTCCACCGTACAATTCTCGAGGGGTTTCCAA
CCAACAAGGAAACTTTACCACAACACATCTTACCCTActggaaattgaaa
aatgacttATATTGTGTAGACAATCTAATTATGCTTGACGATCGCGTCCT
GATACCACGCGCTCTTCGACGTACCCTACTAGAAGAGTTACACATCGGAC
ACCAAGGCGTCAGCGCAATGAGAGAAAACGCAAAGAGACGATTCTTTTGG
CCACAAATGAGCTCACACATACAAAATCACAGGAATCAATGCACCCGATG
CAACCAAATCGCACCCTCAAATCGCAAAGATACACCGGAAGTCCCCGATC
CGCCGATTTATCCATTCCAACAGACTGTTGCTGACCTCTTTCACATGGCA
GGACGCCTGTATATCGTTTATGCAGATCGCTTCTCCGGTTGGCCAGAGGT
CGCCTCAACCAAACCTGATGCTACAGCTACCACGGTTATTAACATTCTCC
GAAGATATTTCACGAATTTTGGCGTCCCCGAAGAACTGTCATCAGACGGG
GGTCCGCCATTCACATCTCACGAGTTCGAAAACTTTCTAAGATCTTGGAA
CGTTTCACATCGAATATCATCTGTCGGCTACCCCCAAAGCAACGGACGAG
CAGAAGCTGCAGTTAAGACTGTTAAACGGATATTAACGACCAATATTAGT
CAATCTGGGTCACTGGACACCGATAATGTCGCCAAAGCCCTTCTCCTGTA
CCGAAACACTCCATCACCAGACATGGGAGTCTCACCTTCTGAGCTCCTAT
TTGGACGCAACATCAGAGACCATCTTCCAGCACCAAGACGTTTCCGGAAA
GAATGGATTGACCTAGCTGATATTCGCGAGAACACTTTTACTAGAAGGCA
CCAACAAGCTTGCACGAAATCACAACGACACCTCCCTGATTTGAAAGTTG
GAGACACTGTTTCCATTCAGAACCAAACTGGTAACACTCCGCTTCGATGG
GAAAAGACCGGGGTAATCAGCGAAAGTTTACCCCATCGACAATATCGTGT
TGTAGTCGATGGTAGCCGCCGTACGACACTACGTAATAGACAGTTTTTAC
GCCCAATACCAAACGAAACACGCAACGATATCATCGATTTAGACATTCTA
CGACAAACAAAAGAAGAACATCTTCCCAAAACTAACGGGACAGATCTACC
AGCACTCAATCAACCAGAAACAATTCCAACTGAACAAGAGACAACTCAGG
CAGACACTTCACCCTCAATCGTCTGCCCTCCGACACCCGTCATCCAAACA
AGACGATCAACACGCACTAGAAGACCACCAGAGAGATTTAAAGACTACGT
TATGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000289_pilon | genome | sc0000289_pilon:328109..329788 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1680:1 |
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