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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000125_pilon:590010..592224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039069 ID=XLOC_039069|Name=XLOC_039069|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2215bp|location=Sequence derived from alignment at sc0000125_pilon:590010..592224+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCGAAGTAGATCAAATTCTCGCTCGAGGAGTCGTAGTACATCAcc
caagaaaagaaaaagtaaggTAAGAGCAGGATGGCAtcgttttcaaactt
tttttaaatacagcAGTTTTGATTTGGCACTGTTTCCAATTGTGATAATT
ATATTTTGTTTATCTTGTCTTATTTCAACTGGGCTTTCTAGCCTTTCTAT
TGTAGCCGTCTATAGCTAATTGGTCTAAGTAAATCTCTCATTCttttttt
GTGTAATTTCAGGATCGGGAAAGAGAGCGTGATAGAGACAGAGATCGGGA
TCGGCATAAGAGAAGCAGTCATCGCCATCGTAGTCGGTCACCTGCTCGAT
CTAAAAGAAGAAGTCGCAGCAGATCACCAAGTGTTGATCGGTTTGGACGG
TCCACCAAACGCAGGGATAAATTTGCTGATGAAGATGATGATACCAGAGT
GGAACCaggaatgaaaaatgaagagatggaaagacaaagaaaaatgtaaG
CCAAGTCTTAGCcgaaattatcttttcaacaaggttCTGATTCCAGCTGA
TTCTGTTTTCCCATCAAgatcaaaaatatactaaaatgtACAGactatca
atgttttttttggaattttataaaaatgttgttCCCGTATACGCTGGTAT
ACGTGATATCAACCTATCTGTTGTGTTTAAGATCTCTCATCAAATTTTAT
ATGAAATTGATGCTTTAGTGGTATTTTTTAGCCTTCTTTGAATGTGAACT
GAATTATGATATGTTCGTCCTGACaggacaaaaataaatcatcaatCACT
GATTCTATATGGCTGTAATTTTACAAGCATCTTGTAAATGTGTCCTGTTC
GCCCTTTTGATGTTGTAACATCAAAAACTATATGAAGTTTGTTATTGCTT
TTTCAGTCGAGCAACAGAGATGCAAGCGAAATTTATTGAAGAAGAAACGC
AAAGGCGAATCGAAGATGTGGTCATGAAGAGAGTAGAAGAGGAGTTAGCT
AAACGAAAAATCGATGTTGATGAAGAAGTGATGCGGAAAGTAGAAGAAGC
CAAGAAACACGTTGAACATCATTTGGAAGGCGAATACGAACGAAGGACGA
AAGAAATTGCTGAACAGTTCAAATTGAAAGAAGTACGTTTTCACTTTATT
TAGGATGTTAGATTGGTTctttgaattcatgatatgcaccactggagagt
cttctgagaacttttagaattttccacccaatacgtcacttaaacaatag
aaaaagtgacgtattgggtaaaaaaacaaacagaaaagttgcataatttc
ataagtcattgcagtggtgtgtaagagaaagattcgaatttcgGGTgggg
gggATCTAGTTGATTTCAACTTAAGGGATTAATGTTTCAGTTCGGactac
aaaaaaaattcaaataatagaggttcgacgAATAAGAGAGTGTTGACTTT
AACACATTTCCAGCCAAGTCAAAGACTTCATTACTCAATTCCTAGAGAAA
TATGGGAAACAAATAATGCAATTCCATTTTTAAGCAATATTCTTTTTGGA
GTCTTTGTTCACACAGCAATAATATTTCTTCCTTTTGTAGGAGCAATTAA
AACAAGAAATCGAAAGGCTGAAAAAGGAAATCGACCTAGCCTATTTGAAA
GTCCAAGATACAGAGAAAAAATTGGTAAGTTTCTTAACTATAAATGAAAG
AATTTTCGATATTTATTAGTTCTGAATCCTTCCCTGTGTTATACATTTGA
ATTGCTATTCGCAACGAGATGCAGCTATCCAATATTGACAACTCCACAAA
TGGCGAAAGTGGAAATGAGACTAGAAGTTAACTTAATAACGGGAGTGGTT
GCACCGTAATGCCTTCGCCTTTTGAATCGCCCTCAATACTGACAGCAATA
ATTGCAAAAATCCTTATTACTGAATTACTCTTGATTCTTTCTTTAACACT
GAGACAGACATAAAAAGAGACTGATGCCGTAAATAGTTGTCCTTATTTAT
TTCAACCCTATCTTTTGACtcaattgattgattttttttcttactaGGCC
GAAGAACGACTCACTATGCTCGAAAAACAGCGTGGCTTAGAGGACGAAAA
ACGACAAATCGAAGCGGACTTTaagaaaaacgaaagaaaagcaCAAGAAG
TGATATTAAATAAAAAGAACTCGAGACCAAAATTGTCTTTTGGATTGAAA
AGCCTACCCAAATAA Coding sequence (CDS) from alignment at sc0000125_pilon:590010..592224+ >XLOC_039069 ID=XLOC_039069|Name=XLOC_039069|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1560bp|location=Sequence derived from alignment at sc0000125_pilon:590010..592224+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCGAAGTAGATCAAATTCTCGCTCGAGGAGTCGTAGTACATCAcc
caagaaaagaaaaagtaagATGCCTCGAAGTAGATCAAATTCTCGCTCGA
GGAGTCGTAGTACATCAcccaagaaaagaaaaagtaagGATCGGGAAAGA
GAGCGTGATAGAGACAGAGATCGGGATCGGCATAAGAGAAGCAGTCATCG
CCATCGTAGTCGGTCACCTGCTCGATCTAAAAGAAGAAGTCGCAGCAGAT
CACCAAGTGTTGATCGGTTTGGACGGTCCACCAAACGCAGGGATAAATTT
GCTGATGAAGATGATGATACCAGAGTGGAACCaggaatgaaaaatgaaga
gatggaaagacaaagaaaaatGATCGGGAAAGAGAGCGTGATAGAGACAG
AGATCGGGATCGGCATAAGAGAAGCAGTCATCGCCATCGTAGTCGGTCAC
CTGCTCGATCTAAAAGAAGAAGTCGCAGCAGATCACCAAGTGTTGATCGG
TTTGGACGGTCCACCAAACGCAGGGATAAATTTGCTGATGAAGATGATGA
TACCAGAGTGGAACCaggaatgaaaaatgaagagatggaaagacaaagaa
aaatTCGAGCAACAGAGATGCAAGCGAAATTTATTGAAGAAGAAACGCAA
AGGCGAATCGAAGATGTGGTCATGAAGAGAGTAGAAGAGGAGTTAGCTAA
ACGAAAAATCGATGTTGATGAAGAAGTGATGCGGAAAGTAGAAGAAGCCA
AGAAACACGTTGAACATCATTTGGAAGGCGAATACGAACGAAGGACGAAA
GAAATTGCTGAACAGTTCAAATTGAAAGAATCGAGCAACAGAGATGCAAG
CGAAATTTATTGAAGAAGAAACGCAAAGGCGAATCGAAGATGTGGTCATG
AAGAGAGTAGAAGAGGAGTTAGCTAAACGAAAAATCGATGTTGATGAAGA
AGTGATGCGGAAAGTAGAAGAAGCCAAGAAACACGTTGAACATCATTTGG
AAGGCGAATACGAACGAAGGACGAAAGAAATTGCTGAACAGTTCAAATTG
AAAGAAGAGCAATTAAAACAAGAAATCGAAAGGCTGAAAAAGGAAATCGA
CCTAGCCTATTTGAAAGTCCAAGATACAGAGAAAAAATTGGAGCAATTAA
AACAAGAAATCGAAAGGCTGAAAAAGGAAATCGACCTAGCCTATTTGAAA
GTCCAAGATACAGAGAAAAAATTGGCCGAAGAACGACTCACTATGCTCGA
AAAACAGCGTGGCTTAGAGGACGAAAAACGACAAATCGAAGCGGACTTTa
agaaaaacgaaagaaaagcaCAAGAAGTGATATTAAATAAAAAGAACTCG
AGACCAAAATTGTCTTTTGGATTGAAAAGCCTACCCAAATAAGCCGAAGA
ACGACTCACTATGCTCGAAAAACAGCGTGGCTTAGAGGACGAAAAACGAC
AAATCGAAGCGGACTTTaagaaaaacgaaagaaaagcaCAAGAAGTGATA
TTAAATAAAAAGAACTCGAGACCAAAATTGTCTTTTGGATTGAAAAGCCT
ACCCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000125_pilon | genome | sc0000125_pilon:590010..592224 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 613-780:2048 |
| Aaloc | 529-612:1591 |
| Aaloc | 304-528:908 |
| Aaloc | 70-300:263 |
| Aaloc | 1-69:1 |
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