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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000125_pilon:573863..577876- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039065 ID=XLOC_039065|Name=XLOC_039065|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4014bp|location=Sequence derived from alignment at sc0000125_pilon:573863..577876- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTTGCAAAGGGAAAGAGGTAATAGCCTAGTTTGTAATCCTGATATAA
GAGTCTAGACTGCTAGAGTCTACTTCTGACTGAATTTTGTTTTCTGATAG
TTTTTGATGACGCTGAGTCCAGTGAAGTAGACTAGGAGCATTTGGACTAT
TTTATGGTCCGCCTAAATACTACCAGGCCACTTAATCGCACCATCCAGTC
TTTAAAAAAGGCCCCTGGGTTAAGTTATACCCTGAAAAGTTGCAGATTGC
TTATTTCATCAGAAGGAGTAAATGATCAGTTACTTCCTCAATTTCTTGAT
GTTTTTTAAGTGGTTGACACATTTTTCATGAATTTCGTAAATTGATTTTT
TTCAATAGGGAAAATAAAAACATAAATATGTTCCCCTCAGTACAGAAGGA
TGAGGAAAAGCAAAATGTTCGACAAAAACTGGAGAAGAAAAGAGAAGAAA
GAAGCTCCGGGTCCTCCTCACCTACAGGTATCTCTATTTAATTGGATTTA
ATTTCATAATTTTATTTGTAAAAGTAAAAAATATACACTACTGTCGTTTT
CACGCTGAGCCATTGTCAAGTGTAAAACTACTTCGAAAAAATCTCAACAA
AATGTACAAAAAGTTGTTTCCTCTAAGGGAACATAATAATTAGAAATTAA
AGGTAATGAAATGCTAAAAGAGACTGTTGTGAAATGTAAAACTTTTATAA
TGATGTTGTAAAATATAAAAAAATTTAATCGTCAGGTAGGACTGCTTTAT
ACTGCTTTATAGGATTCAAATTGGATTAAATTAACATGAGCATAAAAATT
AGCAAAAATGTATATTTGTAATTTCGCCAGATTTCACCATATTTAATTTT
GTGAGGGAATCTTTTCATTTTGGCATTTTGTGAGCAGATTTTTCTTGTTT
GTTTATTTGATTATTTATTGTTGACACATAAACGAAAGCTTTAAGCTAAT
ACAAGTCAACCTATTTACTACAAAAAATAGACTTGATTTTTACAAGCATG
AGAAATGTAAATGATCATTTTGGAAGTTTGAAACTTTTGAGTGCACATTC
GTTCGACTAAAATTATATTTCTGCCTCAAAGTTACAGTTTAAATCTAACA
AAAGAACCAGTATTTTCTAGAGGGTATTCTTAGGGTATTCTTACGATGTG
GCCAATTTTCATTCTGATATTCTTATAGAAGATATTCTTGTAGTTCCCAT
ATTTTTGGGAACCTATTTTAAACTTGCAATAAATAATAATGCTCTTTCAA
ACTTTAAAAACGCATGGTGTATCATATCATTATGATCTAACATGATAGAA
AAAGTTCTTGTCTTTTTTTACAGATGAAGAATATGAGGTCATAACATCAG
CCATGGTACAAGAAGAAATGAATTCGTATAGAAGTATGATCAAAAGGAAA
ATATTGACCATCGATCTTTCTGACCATTCAACTTATATTCAACTAGGAAT
TGGTGGTGCTACTGGATTGTAAGTTATTACGTTAGACAGTCATAAACCTT
TGATTGGCCAGGTTTACCTGAGAAGGACTACTCTTTACACCTTATCATAA
ACATATAAACGACTGGACATCCATCTCCTTTGTCTTTTTGTAGAAAAGGC
TGCTAGCTTCGTTGCTGCCTCGTTAAAAGCATAAAATGAAACAATAGATT
TTGATGATATACCACTAGGGAATACCTTGCTAACAACGTCAAAACTTCGA
CAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCGTTTATCTATATCATAA
CAAAGATAACAGAGGCAAAATCATCGTCAGCTTGTCAAAACTCCGACTAA
TATTTCTAAATTTTGACTTAAAAGTGTCTAATAATTTTAGAGAGTGTCAC
ATTCTAATTTCGATTTTCTTGTGGAAACAGGCTCTCAACTTTGGCAAGCT
ATTTTTTTCAAGTAATAAAAAAAATTATTTGAGTGACAAAAGGGATTCAA
AAGTATACACGCAGTTGAAATTCTGCATTTTAGAGTTTTAAATTTGAAAA
TGTTGATAAAATATATTGCAAACTTGTGAAAAAATTCGAAAATAATTTTT
TTGTACATTAGGAGTAATGTTCAATCCTTTTACCGAAATAATTCAAAGAA
ATAAAATTATGACGGAATATTGTCGGATTTTTCATACCAATTTTGAAATA
CAAGCGGCAACGAAGCTCGCTTCAAAGAGACAATAAAAGATAGACGTCCA
GTCGTTTATATGTTCATGACCTTATCAACGTTAAGCTATTAGGATAGGGA
AAAAACCAAAATAGAAGGACAAGTAGGATATTCTTTATATTCTGTGAGTT
AGGAAAGGGATTGGCTCCTCACAAATTTCTTATTGAAGAACATCATTTAA
ATGTGTCTCCTTCCATTTGCTTGTACAACATTTTTAAACAAAAACAGAAA
CAACCCTTTCCCCTTTATTGTCGCACAACCACAGATTTTAACAAATTCTA
TTGTTTACTCTGCTTTCTCAGCAAATAGGGCGCCTCCTTTCTATTTCATA
AAAAATATCTTTAACGGGACAAAATTACTTTTGAAAGTTTCTTTTTTTAC
CATAATTCCTCTGTAATGACCTCTTATGAGGTTTTTCCCCTAATTTCGCT
TATTATCAATACTATTGGTTACTTATTTTTTTCTCAGGTTGACAGGCCAC
ATGGTAGGGAAAGTTGGTAAAGCAATGGCTGCTGGGATTGGTGGTACCAT
TCTTCTGATCAATGTAAGTTAACAACCTGCTATCTACCACCTTTGTTTTG
ATGTGAAAAGAACAGCTTTGTTTTCCATTTTGAAAATCAATTATAAACTT
TCTTATGAAAGGATGGTTAAACAGTATGACATCAGTTCGGGAAATTGCAT
AGATCCGCAACGTCCCAATGTTGCGTTTTTTTTCGCAACGCTTCCCTCAG
CGTGCGCTGCAATTTTTCGCAACGTTCCCAATGGAAGTGTGCGATTATGA
ACACCAACTATGACGACCAATTTTTGCAAATTTGGCATATTTGAACAAAG
TAGCATTTTTTCCAAGAATGATTGTGAATAATCGCTAGGTAGGAAATTAA
AATACTAGGGTAGGGTGAAAAGTTTCCTTTTGGGTTGTTCTTCAAAATGC
AAATTATTTTGGGACCCCGGTCAGGCCCTGCGTCCGTAGGCCAGGGCTGT
GAAATTATCCATTGGTAAAACTGCGGAATTTTGCAGCGCTGCGAAATATG
ACAACGCTGCGAAATATGACAACGCAAAAACGTTGCGGATCTATGCAATT
TTCCGAACTGAAATTGCCTACCCTACAACGCTTCCAAGGTCTAAAAAATA
CCCTTAGCATGTCTGTGTATTTTGAACCCACCAAAAACCTCCTGTAGTAA
ATTTGATTTTCTCCTGAAATACAGGTCGGTCCAATTTGATTGACCCGAAA
TATCAAGAGGGAATAGAAAACTTTTAACACTCTTCCATGTTTCTAGATGG
GGACACGTGCAGGCTACATCACAGTAGATTGGGAGAAGGTAGACGCAGAT
ATGAGAACAGCTAGCGAACAGATCAGCGAAAAGATTGCTGAACAACAACA
GAACGAGGAAACACAAGAACTTCTTAAGAAAGTAAGTAAATTGGTTTTAA
TAATACTCCAATGAGGCCAGGACTCAAACTGGTTGGGGCGACTGTAAACT
TTTGGACCATTATATGATGCTTTTTTTCGAACCAGATGAGCCTGTTGCCC
CAAGGATATGTCCGTTCTTTGCTTGGGAAACTTGCTATAGATTTACACCT
TTTGCTAAGTTATCCAATTACCGCCACTATGGAAGCAATCGTCCGATTAG
CGTAAGAGCACCTCTACAGATTCGAATGTTTGCTCTCACAATGGCGGAAA
TTACGTAACTTGTCAAAAAATCTCTATTATTTGTTATTCACGGTTTACAA
CTCGGGTTTTAATCCATTCATTTCTGTTCTTTACAGGGTGGTTTATTTAT
TCGACGCAATTTGGTGATGCTTGGAGGATTTGCTGCCGGTTTCTTTTTGG
GAATGGCTACGTGA Coding sequence (CDS) from alignment at sc0000125_pilon:573863..577876- >XLOC_039065 ID=XLOC_039065|Name=XLOC_039065|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1146bp|location=Sequence derived from alignment at sc0000125_pilon:573863..577876- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTTGCAAAGGGAAAGAGATTGTTGCAAAGGGAAAGAGGGAAAATAAA
AACATAAATATGTTCCCCTCAGTACAGAAGGATGAGGAAAAGCAAAATGT
TCGACAAAAACTGGAGAAGAAAAGAGAAGAAAGAAGCTCCGGGTCCTCCT
CACCTACAGGGAAAATAAAAACATAAATATGTTCCCCTCAGTACAGAAGG
ATGAGGAAAAGCAAAATGTTCGACAAAAACTGGAGAAGAAAAGAGAAGAA
AGAAGCTCCGGGTCCTCCTCACCTACAGATGAAGAATATGAGGTCATAAC
ATCAGCCATGGTACAAGAAGAAATGAATTCGTATAGAAGTATGATCAAAA
GGAAAATATTGACCATCGATCTTTCTGACCATTCAACTTATATTCAACTA
GGAATTGGTGGTGCTACTGGATTATGAAGAATATGAGGTCATAACATCAG
CCATGGTACAAGAAGAAATGAATTCGTATAGAAGTATGATCAAAAGGAAA
ATATTGACCATCGATCTTTCTGACCATTCAACTTATATTCAACTAGGAAT
TGGTGGTGCTACTGGATTGTTGACAGGCCACATGGTAGGGAAAGTTGGTA
AAGCAATGGCTGCTGGGATTGGTGGTACCATTCTTCTGATCAATGTTGAC
AGGCCACATGGTAGGGAAAGTTGGTAAAGCAATGGCTGCTGGGATTGGTG
GTACCATTCTTCTGATCAATATGGGGACACGTGCAGGCTACATCACAGTA
GATTGGGAGAAGGTAGACGCAGATATGAGAACAGCTAGCGAACAGATCAG
CGAAAAGATTGCTGAACAACAACAGAACGAGGAAACACAAGAACTTCTTA
AGAAAATGGGGACACGTGCAGGCTACATCACAGTAGATTGGGAGAAGGTA
GACGCAGATATGAGAACAGCTAGCGAACAGATCAGCGAAAAGATTGCTGA
ACAACAACAGAACGAGGAAACACAAGAACTTCTTAAGAAAGGTGGTTTAT
TTATTCGACGCAATTTGGTGATGCTTGGAGGATTTGCTGCCGGTTTCTTT
TTGGGAATGGCTACGTGAGGTGGTTTATTTATTCGACGCAATTTGGTGAT
GCTTGGAGGATTTGCTGCCGGTTTCTTTTTGGGAATGGCTACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000125_pilon | genome | sc0000125_pilon:573863..577876 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 496-573:79 |
| Aaloc | 361-495:569 |
| Aaloc | 286-360:1377 |
| Aaloc | 142-282:2690 |
| Aaloc | 22-138:3656 |
| Aaloc | 1-18:4015 |
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