|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:105345..107159+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039024 ID=XLOC_039024|Name=XLOC_039024|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1815bp|location=Sequence derived from alignment at sc0000192_pilon:105345..107159+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAAGTTGTGTCTTTGCAAAGTTGAGCAGAGTGAAGAAGTGATTTCGCA
GACTTTCGCCATGGCTTGTGATCGTGCAAtcgaaaaaacaacatttttaa
cAGTACTCTGGTATTTACTTCCTGCACTGGTGCTCGCAATCTTAAATCTC
CATTCAGCATGGAAAAACTCTAAGTTCACAATACAGCCACCGTTTATGTT
TCTCCAAGACAACGATCGTAACCGCCTCTTAACAACCGTAACTTATGGGT
TTTTATCGCAAAACATTTTGGAAATCATTATTCACAAAGATCCATCCGCC
AAAAACACGTGCTCTAGTATTAAGGGACCTGAGAGTTATCTTTGTTCCTT
TTCCATGCAAATCCTCATGTCAACACTGGTTGCTTTCACATCATACCCAC
TATTCGCACTCATCTCATCAAAACATTTATTAGTCGCGTCGATTCTTGGT
ATCTTTTACACTGTTTGGGAAATCGTCAAGACAGGAttgcaatttcattt
taattgcAAGAGTGATTTAGTTCAGGAGGACGATCAAGTTGTGAACAGCA
CTGCGATTATTTTCACCCCAgcttttgtgtttttgagtttcaTTTACTTT
GGGTTTGCAAGCAGATTAAACGCATGTCTTAAAACTAGATGTTACGAGTT
ACCAAGCGTTGAAAATAGCGTCGTAGCTAAACACCAAATCTTACATCTTc
aaaaactgatcaaaaacagatatccaaagccgaaacaaaccattgttcaa
aaactaaaaacagCTTTTAAACCTTGGTATAAATTCCCTAGTGAGATCTG
GCAATGCATGGTTGTGATTGGTGTATTATTATACTTCTTCATTGCTTTTG
GTCAAGTCCGCATGTACCATTTCTTACTAAAATCCACAGACGATATCTCT
CTCAAGGCTCTCTGGTATGGCACACTAATTTTATCCATCATTGCCTACAT
TGTTATGGGAGTTCACTTTTTGTATTGTGTCCAAGGAGATTCATTCTCCA
TTTATAACGGGACACAGAAACTTTACAAGAAAACTGACAAGAATTACAAT
GCTGCTTTATATCATCATATGGTGTTCCCGGCTTATTTAATCAGTTTTAT
GGTTGTTGGATTTGGCTTTTGTTATGTGTTCGTTGCTATAGTAACTATAA
CCATTTACGGGTTAGCACATTTGGAAGGCAGTCAGGTGCTGATGCTATTC
CGGATCTGTTTATCGATTTTTGGTGCTGGATTTGTCTTCATTTTGACACA
AAGGTTAATCATACGTTATGCTTTAACTGATTTAGAACACTCGAAAACgc
acatcaatttgaaatatcCAAGCCTGTTTTTTGTACTCAAGTTTTTCCTA
CTATTTGCTAACATTTTAACAAGTATCAAATCGCTAGCTAAACGTTTGCT
GTTATTGGTGGTCAGCTTTTTATTCTTCTACGGCCGCATTGATCGCAACC
CGTTGGTATTTTTCAGGAGTTTCGATTTATCCAAAACCTATGCATCTTTC
TTACGagtagaaaatgttttcaaaagtcCAGTCATGAGATGTTTCTGTCA
AATGCTTTTGGAACCACGTACCGCGCATGCGTCAAATCTCACAACACAGG
AGCAAACGCGTGACTGTTTAGGGAGACCGAAGATACAAGTTTCTGACCGA
TTGCTTCAAATCATCGACCCTTATCAGAATAACAAACGAGCTCGAAACAG
ATGGTTTTTAGCATATACATTGGTGAACAACCCAGAGCTGcagaaattga
gaaaaaagaacaTGGCGGAGATATTTCCTCTTCAAGACTTCTTGGAGATA
CAAATTGATGCCTAG Coding sequence (CDS) from alignment at sc0000192_pilon:105345..107159+ >XLOC_039024 ID=XLOC_039024|Name=XLOC_039024|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3630bp|location=Sequence derived from alignment at sc0000192_pilon:105345..107159+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAAGTTGTGTCTTTGCAAAGTTGAGCAGAGTGAAGAAGTGATTTCGCA
GACTTTCGCCATGGCTTGTGATCGTGCAAtcgaaaaaacaacatttttaa
cAGTACTCTGGTATTTACTTCCTGCACTGGTGCTCGCAATCTTAAATCTC
CATTCAGCATGGAAAAACTCTAAGTTCACAATACAGCCACCGTTTATGTT
TCTCCAAGACAACGATCGTAACCGCCTCTTAACAACCGTAACTTATGGGT
TTTTATCGCAAAACATTTTGGAAATCATTATTCACAAAGATCCATCCGCC
AAAAACACGTGCTCTAGTATTAAGGGACCTGAGAGTTATCTTTGTTCCTT
TTCCATGCAAATCCTCATGTCAACACTGGTTGCTTTCACATCATACCCAC
TATTCGCACTCATCTCATCAAAACATTTATTAGTCGCGTCGATTCTTGGT
ATCTTTTACACTGTTTGGGAAATCGTCAAGACAGGAttgcaatttcattt
taattgcAAGAGTGATTTAGTTCAGGAGGACGATCAAGTTGTGAACAGCA
CTGCGATTATTTTCACCCCAgcttttgtgtttttgagtttcaTTTACTTT
GGGTTTGCAAGCAGATTAAACGCATGTCTTAAAACTAGATGTTACGAGTT
ACCAAGCGTTGAAAATAGCGTCGTAGCTAAACACCAAATCTTACATCTTc
aaaaactgatcaaaaacagatatccaaagccgaaacaaaccattgttcaa
aaactaaaaacagCTTTTAAACCTTGGTATAAATTCCCTAGTGAGATCTG
GCAATGCATGGTTGTGATTGGTGTATTATTATACTTCTTCATTGCTTTTG
GTCAAGTCCGCATGTACCATTTCTTACTAAAATCCACAGACGATATCTCT
CTCAAGGCTCTCTGGTATGGCACACTAATTTTATCCATCATTGCCTACAT
TGTTATGGGAGTTCACTTTTTGTATTGTGTCCAAGGAGATTCATTCTCCA
TTTATAACGGGACACAGAAACTTTACAAGAAAACTGACAAGAATTACAAT
GCTGCTTTATATCATCATATGGTGTTCCCGGCTTATTTAATCAGTTTTAT
GGTTGTTGGATTTGGCTTTTGTTATGTGTTCGTTGCTATAGTAACTATAA
CCATTTACGGGTTAGCACATTTGGAAGGCAGTCAGGTGCTGATGCTATTC
CGGATCTGTTTATCGATTTTTGGTGCTGGATTTGTCTTCATTTTGACACA
AAGGTTAATCATACGTTATGCTTTAACTGATTTAGAACACTCGAAAACgc
acatcaatttgaaatatcCAAGCCTGTTTTTTGTACTCAAGTTTTTCCTA
CTATTTGCTAACATTTTAACAAGTATCAAATCGCTAGCTAAACGTTTGCT
GTTATTGGTGGTCAGCTTTTTATTCTTCTACGGCCGCATTGATCGCAACC
CGTTGGTATTTTTCAGGAGTTTCGATTTATCCAAAACCTATGCATCTTTC
TTACGagtagaaaatgttttcaaaagtcCAGTCATGAGATGTTTCTGTCA
AATGCTTTTGGAACCACGTACCGCGCATGCGTCAAATCTCACAACACAGG
AGCAAACGCGTGACTGTTTAGGGAGACCGAAGATACAAGTTTCTGACCGA
TTGCTTCAAATCATCGACCCTTATCAGAATAACAAACGAGCTCGAAACAG
ATGGTTTTTAGCATATACATTGGTGAACAACCCAGAGCTGcagaaattga
gaaaaaagaacaTGGCGGAGATATTTCCTCTTCAAGACTTCTTGGAGATA
CAAATTGATGCCTAGAACAAGTTGTGTCTTTGCAAAGTTGAGCAGAGTGA
AGAAGTGATTTCGCAGACTTTCGCCATGGCTTGTGATCGTGCAAtcgaaa
aaacaacatttttaacAGTACTCTGGTATTTACTTCCTGCACTGGTGCTC
GCAATCTTAAATCTCCATTCAGCATGGAAAAACTCTAAGTTCACAATACA
GCCACCGTTTATGTTTCTCCAAGACAACGATCGTAACCGCCTCTTAACAA
CCGTAACTTATGGGTTTTTATCGCAAAACATTTTGGAAATCATTATTCAC
AAAGATCCATCCGCCAAAAACACGTGCTCTAGTATTAAGGGACCTGAGAG
TTATCTTTGTTCCTTTTCCATGCAAATCCTCATGTCAACACTGGTTGCTT
TCACATCATACCCACTATTCGCACTCATCTCATCAAAACATTTATTAGTC
GCGTCGATTCTTGGTATCTTTTACACTGTTTGGGAAATCGTCAAGACAGG
AttgcaatttcattttaattgcAAGAGTGATTTAGTTCAGGAGGACGATC
AAGTTGTGAACAGCACTGCGATTATTTTCACCCCAgcttttgtgtttttg
agtttcaTTTACTTTGGGTTTGCAAGCAGATTAAACGCATGTCTTAAAAC
TAGATGTTACGAGTTACCAAGCGTTGAAAATAGCGTCGTAGCTAAACACC
AAATCTTACATCTTcaaaaactgatcaaaaacagatatccaaagccgaaa
caaaccattgttcaaaaactaaaaacagCTTTTAAACCTTGGTATAAATT
CCCTAGTGAGATCTGGCAATGCATGGTTGTGATTGGTGTATTATTATACT
TCTTCATTGCTTTTGGTCAAGTCCGCATGTACCATTTCTTACTAAAATCC
ACAGACGATATCTCTCTCAAGGCTCTCTGGTATGGCACACTAATTTTATC
CATCATTGCCTACATTGTTATGGGAGTTCACTTTTTGTATTGTGTCCAAG
GAGATTCATTCTCCATTTATAACGGGACACAGAAACTTTACAAGAAAACT
GACAAGAATTACAATGCTGCTTTATATCATCATATGGTGTTCCCGGCTTA
TTTAATCAGTTTTATGGTTGTTGGATTTGGCTTTTGTTATGTGTTCGTTG
CTATAGTAACTATAACCATTTACGGGTTAGCACATTTGGAAGGCAGTCAG
GTGCTGATGCTATTCCGGATCTGTTTATCGATTTTTGGTGCTGGATTTGT
CTTCATTTTGACACAAAGGTTAATCATACGTTATGCTTTAACTGATTTAG
AACACTCGAAAACgcacatcaatttgaaatatcCAAGCCTGTTTTTTGTA
CTCAAGTTTTTCCTACTATTTGCTAACATTTTAACAAGTATCAAATCGCT
AGCTAAACGTTTGCTGTTATTGGTGGTCAGCTTTTTATTCTTCTACGGCC
GCATTGATCGCAACCCGTTGGTATTTTTCAGGAGTTTCGATTTATCCAAA
ACCTATGCATCTTTCTTACGagtagaaaatgttttcaaaagtcCAGTCAT
GAGATGTTTCTGTCAAATGCTTTTGGAACCACGTACCGCGCATGCGTCAA
ATCTCACAACACAGGAGCAAACGCGTGACTGTTTAGGGAGACCGAAGATA
CAAGTTTCTGACCGATTGCTTCAAATCATCGACCCTTATCAGAATAACAA
ACGAGCTCGAAACAGATGGTTTTTAGCATATACATTGGTGAACAACCCAG
AGCTGcagaaattgagaaaaaagaacaTGGCGGAGATATTTCCTCTTCAA
GACTTCTTGGAGATACAAATTGATGCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:105345..107159 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1815:1 |
|
