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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:76700..78577+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039019 ID=XLOC_039019|Name=XLOC_039019|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1878bp|location=Sequence derived from alignment at sc0000315_pilon:76700..78577+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCATTTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAA
TTGCACTGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCA
GCCAACGTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGAC
AGTAAAGATGGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAA
CCCCGAGGGTGAGTTTTGAAGATATCTCATACAAAATATTAGAAGAAGCT
ACCATGTCTCAAGCTGAAGCAGAATGATGCGTAATCATTGCTGAGTAGTC
AACAGTTCGATGCCGGCAATTCGATCAATCAAGACCATTCTTTCACCTCC
TCGTCTCTAGCGAGGCCAGTTATTTTTTCGTATTGAACAAATTGCCAGTG
CTGAACTGTGTTCAACTTCAGTGGTCTACTCAGCAAAGATGattgtatca
ttgtttttttttcaactgccGTGGTTTGAGAAAGATAAAGTAGCTCTATT
GCATAgtgtgtttttgaaaaaaatttcattacatTCGCTGAGTTTTCTCA
GGTATTTTATTGTTGAATTAGATATCTTATCTGAATTACTGATGAGCGCT
ATTCCCGCGTTCTGTGTCCCCGCGTTCTGTGTCCCAGGGAAAACAGATAA
GACGCTTCCAGACAGGTAAGAAAATGGTTGATAAAACTTTATTTAAATCG
GTTCTGCTTCATCTTTCTATCTAGAGATTACCATCCCACAATACCTGCTA
CCAGATCTCAGTCGCCTTGGCAAATCATGCGTCTTTTCAATCCGTCCGTC
CACATCAGACCCATTTAACAATCTCGAAGCAACAAATCAGAATAATCAAA
ACAGTTCGATCAACAACGAGgttcatttgaaatattttgattcaGTCGGT
CGCAGTGAGAAAGCAACGCATAGCATTCATCCAAAATTACTTGTAAATCA
CAATTTCAAGGATCTCAAGCCGTGTGATACAGGTAGCTGTTAGGGTTTAT
TTCACATAGCATAGGGGCTACTCACACCTTGATTAGAAGGGTTGTATATG
AATAAGCCCtacataacttttttttaacaTCAGTGGTACTTCAATATGGC
TTTCTTTCGCCGTCTGATTTAATTTGCAGTtcattgtttattttatttca
agatatttcaagaGACATATAAAAATTTTGTACTTTTGTGTCACATAGCA
GAATAAACCCATTGCACGAGCTTCGACAAATCGGGTTATCAGGGATCTAT
CAGCAAGCCTTGTTATTTATATTCCCTATACCATCTCGAGCAGACCGTGT
AACTGATTGTATCCTTCATTGTGTTTTCAAAAGGTAGCCGCATTGGATTT
TTCATATCACCAGGCAGAGAATTATTTTTCATCATCAATGGGATACAATA
TGGACCTTGTGCAGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTC
TTGATTTGTATGGGATGACAAGTCAAATCAAAATCGTAAATTGCAATGGT
AAGTATCCAAAGAACCTTCTTACAAGCAGAAAATCTCCGAGCAGACTCTG
ACTACTCCACACTACTCTAAAAGCCCaggctccgtaagagaatctgctaA
TCAGAAGTTCCAGCATTATTTTGTAgtttgaataatttttgaaCACTTGC
TTTTTAGTTCCATCACTCTTAACATCGGGAATGCAAGCAGCACGTGTATC
GTTCGATAGAAAATGCATCACTGAACAGAACCTACCACGAGATTTGAAAC
GAGATTTATTGAACACTTATAAAACACCAGCAACTCAAAGCACTCAAACT
GAAACAGCAAGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAAGACCC
TCACTCAACATCTGTCATTTTCTTTTAA Coding sequence (CDS) from alignment at sc0000315_pilon:76700..78577+ >XLOC_039019 ID=XLOC_039019|Name=XLOC_039019|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000315_pilon:76700..78577+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCATTTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAA
TTGCACTGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCA
GCCAACGTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGAC
AGTAAAGATGGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAA
CCCCGAGGATGTTTCATTTAAACCAAGAACATGGTATCAACATCCAATTA
ACAGACAATTGCACTGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTT
AGTGTTCAGCCAACGTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGA
TCACGGACAGTAAAGATGGATGGTCTGGTAATTTGAGGTGTGGTATCACA
CTGCATAACCCCGAGGAGATTACCATCCCACAATACCTGCTACCAGATCT
CAGTCGCCTTGGCAAATCATGCGTCTTTTCAATCCGTCCGTCCACATCAG
ACCCATTTAACAATCTCGAAGCAACAAATCAGAATAATCAAAACAGTTCG
ATCAACAACGAGgttcatttgaaatattttgattcaGTCGGTCGCAGTGA
GAAAGCAACGCATAGCATTCATCCAAAATTACTTGTAAATCACAATTTCA
AGGATCTCAAGCCGTGTGATACAGAGATTACCATCCCACAATACCTGCTA
CCAGATCTCAGTCGCCTTGGCAAATCATGCGTCTTTTCAATCCGTCCGTC
CACATCAGACCCATTTAACAATCTCGAAGCAACAAATCAGAATAATCAAA
ACAGTTCGATCAACAACGAGgttcatttgaaatattttgattcaGTCGGT
CGCAGTGAGAAAGCAACGCATAGCATTCATCCAAAATTACTTGTAAATCA
CAATTTCAAGGATCTCAAGCCGTGTGATACAGGTAGCCGCATTGGATTTT
TCATATCACCAGGCAGAGAATTATTTTTCATCATCAATGGGATACAATAT
GGACCTTGTGCAGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTCT
TGATTTGTATGGGATGACAAGTCAAATCAAAATCGTAAATTGCAATGGTA
GCCGCATTGGATTTTTCATATCACCAGGCAGAGAATTATTTTTCATCATC
AATGGGATACAATATGGACCTTGTGCAGGACAAATTCCAATAAATGGCCC
AGTTTATGCAGCTCTTGATTTGTATGGGATGACAAGTCAAATCAAAATCG
TAAATTGCAATGTTCCATCACTCTTAACATCGGGAATGCAAGCAGCACGT
GTATCGTTCGATAGAAAATGCATCACTGAACAGAACCTACCACGAGATTT
GAAACGAGATTTATTGAACACTTATAAAACACCAGCAACTCAAAGCACTC
AAACTGAAACAGCAAGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAA
GACCCTCACTCAACATCTGTCATTTTCTTTTAATTCCATCACTCTTAACA
TCGGGAATGCAAGCAGCACGTGTATCGTTCGATAGAAAATGCATCACTGA
ACAGAACCTACCACGAGATTTGAAACGAGATTTATTGAACACTTATAAAA
CACCAGCAACTCAAAGCACTCAAACTGAAACAGCAAGTGAAGAAAATGAA
CAAATAACTGAAGTGCAGCAAGACCCTCACTCAACATCTGTCATTTTCTT
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:76700..78577 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-852:1660 |
| Aaloc | 469-630:1336 |
| Aaloc | 211-465:727 |
| Aaloc | 1-207:1 |
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