|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:941115..946254- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039010 ID=XLOC_039010|Name=XLOC_039010|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5140bp|location=Sequence derived from alignment at sc0000019_pilon:941115..946254- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAGATTGGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATGA
GTTTTTAAGATTGTCAACTATAAAAATAATCTATCGAACTTCGAGGTGAG
CTTTGTTTTGAAGTTTGTTTTGAAATTTTTTTATTGTCGTTAATAAACAA
TAGCAATCAAAACAAAGGAAGACAAAATAGAGCTGAATTATTCCAATTCA
TTAACGGGATGATCTAATCAATAGAGCCACCTGCTTTCAATAGAATTCTA
TTGTTAAATCATTCGAATTTTTCTCAATCGAATTCTGTCAGTGGTGAAAA
TGAAAACAAGCTATTAGCGTTTACTGTTGAATTCATGCTATGCTTCCATT
ATTGAAGAAAAAAACTTTAATTTTTTGAATGCATGCGAAGGGAGGCATAG
ACAGACATAGCCCAAAATAATTAACATCGCTAATTAATTTTTTGGGGCTT
TTGGTTTTGTCTCTTTTGACATAACTTGTTTTAATATCTTCTTGTGTATA
TATTGTATAGAAAATTAAAATTTATAAAGTAAGTTGGCATTTATTTTAAC
TTTGATGGTTGTATTGATGGATTTTTTTTTGGGATATTATTTTTCTCATT
TGATCGGATTCGATTGCCAATGTTTTTGTTACTTTCGATGATTTGGTTTC
CCAGCTCATAGTTAAAAGATTATTATAAATTTATTACCTGTCCTGCTTTA
ATCATTTTGGCTTCTGGTAGAATTGTTTTTATCATTGGGTCAAACTCCCG
TCAAACTTTAATAAAATTTATATTGAATACAAACTTCAACTTCAACCTCT
TCTAGCCTAAATATTCCTTGAAATACATAACAATCAAGATATTTCACCCC
CTGTAAAATTATATTTTCTCAATGCCATGGCTTTTTTATGATGAAGGATT
CAGGTTCTATAATTTTGCATAAAAATAACATTGTTTTTTTCTCGTACCTT
AGAATGCATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTCTTGAG
TTTCGGCGTTCAAGAAACTGTAAGTAAATTCATTCTTAAAAATTTTTTCT
TTTAAAAACTTTTCTTCGTCTTTATTTTCGATATCCTAGATAGATTCAAA
ACTCAATATTTTCCATTTCCAAAAACCATTTTTATCTTCAAGAAGCAATC
TTTTTCTTTTTGAAAACTTATCTTTTATCTCCAAAAAGGGTCTTGCATTT
TTGTATCTAATTAAGAAAACCACGGTTAAGACACGCTAATTTGATACTCA
TTGAATTACTAAAGTCCTAAAGTGAAATTAGTCTATGGTATTATACCGAA
TTCTTTTGGACCCAGACCTTGTTTCAATGAGATTAAGGTTGACAAGACTA
GGGTGTGTAAATTAACTTTTTTACATTTACAACATAACAAACACATACCT
TTTACTCATAACATAACATCACATCACTTGACAATATCTTTACACATCTA
CCATCACATTACATTCACTGACCACCATTGAGATTTGACCATGACACCAA
CATTGAGGTATTTACAAAACAGCACCTGAAAAATAACATACACAGATCTG
TAAATTCTCTTTGTGGTTTTTGTTTTTTGTTTTTAACGGCTTTAGACACT
TATAAAACAAGATACTCTATATGTATATAGATTTTATTGGGGAAATTTGG
CAGATTGCGTATTTGCGACCTTTGGTTTATAAACTCCAGTGAACCGAAAC
TTAATTAGTCGTTAAGATAGCAAGGGTTAAAAAACACGGAACATAGAATT
TACATAGAACAGACAGAGAGACAGAATAACAGTATTTAAACAAGATAACA
GTATTTGAACGTAACAAAAAAAAACAGACCAGACCAGACCAGACGATATA
CGACCGTTCTCCGAAAATGGAGAAACTAAATCACAAACGAGAAGACAAGA
CAAGGAACTGGAACAAACCTACGTACAAGAAAAGAAAAACTTTACTCAAC
AAAGACATCGACAACCAAAATGATATCTGATTATCGATAAACAATGCCAA
AATCTTATCCATTATAGCAAGAACAACAAGCCAGAATGTTACCAGATTGG
CCAAAGATTGGTGACAGAATCACGCAGCCTTTTCTTGATCAACTGATGGT
CAGTCAACTGTTGGAACAGAATCTGACGCTCGGATTCTTCTTGAAAGGGC
TAAATGGACCACCAGGTCCTCCTGGTCCACCTGGTTCCCCTGGAGAACCT
GGTCCTCCAGGTTTACCCGGTGCACCAGGAGCCCCTGGACACGTTGGTGA
AGATGGTGCTCCTGGTCCAATGGGTCCTCCTGGACCATTGGGTTCTGCTG
GTGTCCCCGGTTTCCCTGGAGAGAAAGGAGATCCAGGTGCAACTGGTTTG
CCTGGATCTGCAGGTCTTCCGGGTGCTCCTGGTTTACCTGGTCCTGAAGG
ATTGGTTGCAGAAACCCGTGATAATGTTGCAGTACAACTGAAACCAGAGG
TGAATACTTTGTAGATTCTTACCCTAATTTAAAAGAATTTCATTTTGAAG
TCATTAATCAGATTTATCTTGCATTTTTATCTGGCATCTTTTAGATTTTG
ATTTCATACAATTATTTTGATAAACTTATACGCCAAAGTTCTAGTTTTGA
CTTGATTGAGGGCAAAATTGATGATAACTCTTGGATTCATTATACATGAA
GAATGATGGAAGTATATTTTGATATATCTTTTTCTTTTCCAGAACTTCAC
AGAGAAATGCGAAGGTGAACGCTTGCTTATTGATTGCAAAACATATAACC
ATATCCAAGTCAAAGATGTATACTGGGGTCGAGATGATACTTCCACCTGT
CAAAATGCACCAAACGGTTTAGTAGCTGACAAATTTTGTGATGGAAATCG
TGAAAATGCCAAACAAAAAGTTGCGGGACAATGTAAAGGCGAACAGGCTT
GTGAAGTTGTCGCCTCCAATATTTTCTTTGATGATAACAGTTGTGGAAAT
ATATTCAAAGTGTTGAAAATTTGGTATGAATGTGTACCCGACTCCAGTCC
GGGCACGGAAGATACGTACGGATCACGGCGTAAACGGAAGCGTGCAACCA
AGGATAAAAGATCTTTTCGAGATAGTTAGATTAAAATCAATGACCCAGAA
ATTCTAATACAAAAAAACCATCTAGTCAGTAAAATGAAAAAGTTTCATGT
GCAGAGAATGTATTATAGACAATTAACTAAATAATCTGCGGATGAGATTT
TGATCAAATTATTGACTTGCTGACAACGTTGGTGTTTCTCAGTTATTGCC
AGAGAAGAGCAGAAAGGTGACGACATTGCTGAGAGAGTAAGACAAGAAAG
AAAGACGAGCTCCCACGAATTTTTTATAACAATAAAGCTTTTTCACATAA
GACCTGTATATATAATATTTTAGTTTAACAATTTATGAAATGATTCCAAC
CTTAGGTGTATGGTGTTCTTAACAGATAATTCTAGAGGGCAGAGTGTCTT
GTTTTATAAGGTCAACTTCCTAAATGCAAAGTTGATTGAAACCAATTTTT
GTAATATCAAATTAACAGTTAAGCCATAAACATCTTCTTTATTTTCAAGA
ATTTTAGAGTTTTTTAAGGTCATGGTAGAATGTCAAGACCACCATCGATC
GCATCAAATAAAAGGGCGTAACCACCCTCCACCCTCCTCTCAATCATCAC
CACTCAATCACATCCACCATTCATACACCACAATCATTTATTCACTCAAA
ATCATAAGTCTTTTAGATAATCCACTCACACATTAAATCATAGTCATTTT
ATCTAGTTGTTAGAGAATTTTAGACCATTATATTTTTTTGTGTTCCTATT
TTTTTTTGTTTTCAAGACCTCATATATTTGTAATTTCAAATTTGACATAA
AACTAAATTATCAATGACAAACAATGAAAATATCTTTCCAACTAATTTAT
TTTTGAGGAATTAACAACTTTAACAAGGACTTAGAATGCTTCTCCTGTAT
TATTTCTAACTATATTTCTATTGTAGTAGTGGATAAATAAATGTATAAAC
TGAATTCAATCAAGAATCGAACGAAATTAATTATTTTCTCCTTTTCTTTA
CTTTTCAAAAACAACAGTCAACACAGATGCAAATGGGAGGAGATATGAAT
AGAATACTTCCAGATTGGCCAAAGATTGGTGACAGAATCACACAACCCTT
TCTCGATCAATTGATGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCG
GATTCTTCTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGGACCACCA
GGACCATCTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGC
CCCTGGACACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAG
GCTTATCTGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGAT
CCAGGACCATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGG
TCTACCTGGACCACAGGGATCAGCTGGAGATTCAGGACCTGAACCAATCA
AACCGGTGAGTAAGAAAAAAACGTTCTTTGTCAACATTCTTCGATGAAAA
CTTTTACCGCCTTTAAACAGGATGTCGACCAGGATTGTATTTTGGCTATG
GAGATATTAGATTTAAGGTTAAAACTTTACAATCTTGCACTAATCGATCT
AGCATTTCAGACATTTCGTTTTCTATTTTTAACTAAAGAAACAATTAGAC
ATACTGTAACCAAAATTCTAGCATTTTCTTTTCAAACAACTTTTCAGGAG
TTCACTGTTGCATGCGAAGGACAAAAACTTTGGATTCAGTGTCAACAATA
CGAATTGATCAAGATCAAAGAAGCATACTGGGGTCGTGAGGACCACGTTA
CCTGTTCTGATACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGCCAAC
AGTGATAATGCCTTCACAAAGGTCGATGCACAATGCAAAGGTCAACAAAA
TTGTGAAGTTGTCGCCTCCAATATTTTCTTTGACGATAACAGTTGTGGAA
ACGTTTATAAATATTTGAAAGTGAAATACGAATGCGAGGCTGACCAGCAG
AACAGCATGGACGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGAAGAA
GCGTGACACCAAAGAGAAGCGATCCTTCAGGGATTCATAA Coding sequence (CDS) from alignment at sc0000019_pilon:941115..946254- >XLOC_039010 ID=XLOC_039010|Name=XLOC_039010|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1986bp|location=Sequence derived from alignment at sc0000019_pilon:941115..946254- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAGATTGGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATGA
GTTTTTAAGATTGTCAACTATAAAAATAATCTATCGAACTTCGAGGAAAA
GATTGGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATGAGTTTT
TAAGATTGTCAACTATAAAAATAATCTATCGAACTTCGAGAATGCATTGG
TCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTCTTGAGTTTCGGCGTTCA
AGAAACTAATGCATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTC
TTGAGTTTCGGCGTTCAAGAAACTTCAACACAGATGCAAATGGGAGGAGA
TATGAATAGAATACTTCCAGATTGGCCAAAGATTGGTGACAGAATCACAC
AACCCTTTCTCGATCAATTGATGGTCAGTCAACTGTTGGAACAGAATCTG
ACTCTCGGATTCTTCTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGG
ACCACCAGGACCATCTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCAC
CAGGAGCCCCTGGACACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGA
CCACCAGGCTTATCTGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAA
AGGAGATCCAGGACCATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTG
CCCCTGGTCTACCTGGACCACAGGGATCAGCTGGAGATTCAGGACCTGAA
CCAATCAAACCGTCAACACAGATGCAAATGGGAGGAGATATGAATAGAAT
ACTTCCAGATTGGCCAAAGATTGGTGACAGAATCACACAACCCTTTCTCG
ATCAATTGATGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCGGATTC
TTCTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGGACCACCAGGACC
ATCTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGCCCCTG
GACACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAGGCTTA
TCTGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGATCCAGG
ACCATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGGTCTAC
CTGGACCACAGGGATCAGCTGGAGATTCAGGACCTGAACCAATCAAACCG
GAGTTCACTGTTGCATGCGAAGGACAAAAACTTTGGATTCAGTGTCAACA
ATACGAATTGATCAAGATCAAAGAAGCATACTGGGGTCGTGAGGACCACG
TTACCTGTTCTGATACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGCC
AACAGTGATAATGCCTTCACAAAGGTCGATGCACAATGCAAAGGTCAACA
AAATTGTGAAGTTGTCGCCTCCAATATTTTCTTTGACGATAACAGTTGTG
GAAACGTTTATAAATATTTGAAAGTGAAATACGAATGCGAGGCTGACCAG
CAGAACAGCATGGACGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGAA
GAAGCGTGACACCAAAGAGAAGCGATCCTTCAGGGATTCATAAGAGTTCA
CTGTTGCATGCGAAGGACAAAAACTTTGGATTCAGTGTCAACAATACGAA
TTGATCAAGATCAAAGAAGCATACTGGGGTCGTGAGGACCACGTTACCTG
TTCTGATACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGCCAACAGTG
ATAATGCCTTCACAAAGGTCGATGCACAATGCAAAGGTCAACAAAATTGT
GAAGTTGTCGCCTCCAATATTTTCTTTGACGATAACAGTTGTGGAAACGT
TTATAAATATTTGAAAGTGAAATACGAATGCGAGGCTGACCAGCAGAACA
GCATGGACGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGAAGAAGCGT
GACACCAAAGAGAAGCGATCCTTCAGGGATTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:941115..946254 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 601-993:394 |
| Aaloc | 163-600:1074 |
| Aaloc | 97-162:4188 |
| Aaloc | 1-93:5141 |
|
