XLOC_039009 (mRNA) -

Overview
NameXLOC_039009
Unique NameXLOC_039009
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:916744..917997-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039009 ID=XLOC_039009|Name=XLOC_039009|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1254bp|location=Sequence derived from alignment at sc0000019_pilon:916744..917997- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAACATATAAATCAATGTTTTTATGGATATTGCCAATAGCCTTTAT TATTGTAACCTTGCCATATAATACGGTACGTAAGGTTGGTTTGCTAAATT AACGCCAATCATGTAGATTTGGAAGGATCTTTATCTTATACGATACTGCG AAGCATGTATTTGAAGTAGCAATTTCCTTTCATTGACGAGAGCTTTTCTT TAGAAAAATATTTATGTCCAAGTTAACACAAATTTGTTAATTAAAAGTTC ATTTTGAATGAATTAGTTGAAAAGAATCATGTTTGATATCCGTTTCTGTT CTCCTATTTCAGCTGTCACTACCAGTTTCACCCGTCCCACCGCTATTGAA CAAATTGTTAAAAGATCAGAATGTAACACTTGGTTTCATCCTCAAAGGTC TTCAAGGTCCACCTGGACATGATGGTAACCCAGGTATGGCTGGAAACCCT GGTTCACCTGGTATGCCTGGTGAGCCAGGTCTTCAAGGTGCACCTGGTAT CCCAGGGGGTGCTGGATTCTTAGGACCTCCAGGTTCTCCTGGTTTACCTG GTATGGATGGTCTCCCTGGTCCTGGTGGTCTCCCTGGATCCCCTGGATGG CCAGGAGGTAGTGGTGAACCTGGTATTCCTGGTCCACCTGGTCCCCCTGG TAGAGATGGAAATGCTGGTGCAACACCTATCAGATATGTAAGTATATTTC ACACTTCTTAAATCATCACATCATTATTGAATTTCCTTGATCACATTGAA TGAAGTCTAACAATGTGTCTTGCCATATGATCAAATATTATTTGGTATAG ATCTGTGCGCGTCTATAAAATAAAAAAATATTGTTCTAGACTTACATGGA TCATCATAAGCAAATAATAACAAATTTCTTGATTTGTTTTTTTGCAGAAC GGTACAGTCAAATGCGAAGAAGACACTGCATGGTTACGTTGCAACGAATA TAAACATATTTCCATCATCTCAGCTTTCTGGGGTCGACGAAACTTCGGTT TATGTACAGAACACACAGGAAACTTGGTGGCCAACAAATACTGCCCAACA ACTCCATTGTTTTTGACCAAAGTCAAGGATGCTTGTGAAGGAACGACCAT GTGTGAGATCAGATGCACCAAATTCTTTTTCCACGATCAAACGTGTTTGG ATGTATACAAATATCTAGAGGTGTATTATAAATGTATTGAAATTATCAAT GGTCACGAGGTCGTGAATGAGGACAATCTATTGAACGCCAATTTCCTTGG ATAA

Coding sequence (CDS) from alignment at sc0000019_pilon:916744..917997-

>XLOC_039009 ID=XLOC_039009|Name=XLOC_039009|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000019_pilon:916744..917997- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAACATATAAATCAATGTTTTTATGGATATTGCCAATAGCCTTTAT
TATTGTAACCTTGCCATATAATACGATGGGAACATATAAATCAATGTTTT
TATGGATATTGCCAATAGCCTTTATTATTGTAACCTTGCCATATAATACG
CTGTCACTACCAGTTTCACCCGTCCCACCGCTATTGAACAAATTGTTAAA
AGATCAGAATGTAACACTTGGTTTCATCCTCAAAGGTCTTCAAGGTCCAC
CTGGACATGATGGTAACCCAGGTATGGCTGGAAACCCTGGTTCACCTGGT
ATGCCTGGTGAGCCAGGTCTTCAAGGTGCACCTGGTATCCCAGGGGGTGC
TGGATTCTTAGGACCTCCAGGTTCTCCTGGTTTACCTGGTATGGATGGTC
TCCCTGGTCCTGGTGGTCTCCCTGGATCCCCTGGATGGCCAGGAGGTAGT
GGTGAACCTGGTATTCCTGGTCCACCTGGTCCCCCTGGTAGAGATGGAAA
TGCTGGTGCAACACCTATCAGATATCTGTCACTACCAGTTTCACCCGTCC
CACCGCTATTGAACAAATTGTTAAAAGATCAGAATGTAACACTTGGTTTC
ATCCTCAAAGGTCTTCAAGGTCCACCTGGACATGATGGTAACCCAGGTAT
GGCTGGAAACCCTGGTTCACCTGGTATGCCTGGTGAGCCAGGTCTTCAAG
GTGCACCTGGTATCCCAGGGGGTGCTGGATTCTTAGGACCTCCAGGTTCT
CCTGGTTTACCTGGTATGGATGGTCTCCCTGGTCCTGGTGGTCTCCCTGG
ATCCCCTGGATGGCCAGGAGGTAGTGGTGAACCTGGTATTCCTGGTCCAC
CTGGTCCCCCTGGTAGAGATGGAAATGCTGGTGCAACACCTATCAGATAT
AACGGTACAGTCAAATGCGAAGAAGACACTGCATGGTTACGTTGCAACGA
ATATAAACATATTTCCATCATCTCAGCTTTCTGGGGTCGACGAAACTTCG
GTTTATGTACAGAACACACAGGAAACTTGGTGGCCAACAAATACTGCCCA
ACAACTCCATTGTTTTTGACCAAAGTCAAGGATGCTTGTGAAGGAACGAC
CATGTGTGAGATCAGATGCACCAAATTCTTTTTCCACGATCAAACGTGTT
TGGATGTATACAAATATCTAGAGGTGTATTATAAATGTATTGAAATTATC
AATGGTCACGAGGTCGTGAATGAGGACAATCTATTGAACGCCAATTTCCT
TGGATAAAACGGTACAGTCAAATGCGAAGAAGACACTGCATGGTTACGTT
GCAACGAATATAAACATATTTCCATCATCTCAGCTTTCTGGGGTCGACGA
AACTTCGGTTTATGTACAGAACACACAGGAAACTTGGTGGCCAACAAATA
CTGCCCAACAACTCCATTGTTTTTGACCAAAGTCAAGGATGCTTGTGAAG
GAACGACCATGTGTGAGATCAGATGCACCAAATTCTTTTTCCACGATCAA
ACGTGTTTGGATGTATACAAATATCTAGAGGTGTATTATAAATGTATTGA
AATTATCAATGGTCACGAGGTCGTGAATGAGGACAATCTATTGAACGCCA
ATTTCCTTGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039009XLOC_039009-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:916744..917997 -
Properties
Property NameValue
Aaloc451-807:358
Aaloc76-450:943
Aaloc1-75:1255