|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:506862..508465+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039004 ID=XLOC_039004|Name=XLOC_039004|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1604bp|location=Sequence derived from alignment at sc0000192_pilon:506862..508465+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAACAAACTTTACGCGGTGTTCCTTCAAACTAGTGTTTACGGTTAC
CATCTTTGTTGCTATGGTCTACCTTTTGCATTATCAAGAACTGCTACAAG
TCAAGATAAAAATGGTAAATTCTTTACTACTGTacgtcccgggggggggg
gcactcgatctgaaaacgaccatacgttcggcccaaaatttggcttctaa
aatcggacccttacagtgcagtgaattatCATACCCTTACGGtataaggg
cgaaaatttttgcaattttccaagaaaatgtggaatttttcctccaaaat
tgaccaattttgtgccaattttaccaaaaaattggccttatATCActatt
tcctacccttacagtgcagtccagtgcagttttgtaatttcctaccctta
cagtgcactagctgaactatgaaaaacctaccctaaagggccgaacgtct
ggtaggtcatttaccttgagtgcccccccccccgggctgtaCGTATAACC
AAGCAACTATGGAAAATAGTTCCTTATGGGTTTTTACTGAAGATGTCTTA
AAAGACAACACTTCAGGCTTTCGCCAAAGGAACAAGTTGTGCCAACGCTT
GAGGGATATTGTGCAGTTATCCTCACCATATCCTACTCTCTCTTAAATTA
GGTTAGTCTAGCATTTTAAACTATGATCATTTTCTTTAGCTCATGTCTTC
ATCTTCCAACCAACCACCATACCATGAAACTGATATCAAGCAAATACAAG
AAAAACGTCACAGACAACTTCAACAATATTGTTCCAACCAAAAGAAACAA
ACCATGATCAAGAGCAGGAATCAATTCAGGAAATTTTTCGAACCAAGAGA
TAAGGAATCATTAAGAACGTTAAAACAGTTGATATACAACGATAGAGCAA
AATTGATCTTTTGTAGTGTCCCTAAAGTAGCATCTACAAACTGGAAACGT
ATTTTCCATACACTTGAAGGACGCTTTCAAAATCCTACAGATCAAGACGG
ACGATTGATTCACCAAGGTTTGCCAGATATTACCGAGCTGTCAAAACCTG
ATCTACAATCTCGTTTAAAAACtcatttttcgtttttattcACTAGACAT
CCTTTTGAAAGAGTAGTTTCGGCCTATAGAGATAAGTTGTACAGTTCAAA
AGATAAATACCTACAACGTAAATATAACAAAATCATTTACAAACTGTATC
GGAACGAATCGTACACACCGGACAAAACACCCGTAACATTTGAAGAATTC
ATTCGGTATATTATCTATGAATGGAGAGACGGGAAAACGTATCGACTCAA
CTTACATTGGAGACCTGTAACCTCGTTTTGTTTTCCATGTTTACTGAATT
ACACCTTCATTGGAAAGTTGGAAACTATAAACCAAGATAGTTACCATATC
ACAAAGTATATAAATAATGTGACCAATTTGAATTTAGAGTTGCCAACAAT
CAGACGTTATAAAACGGAAAGTCGGACTTCACTTTCTGATTACTATAAGA
ATATTTCGGATAGAATTTTGACTGATTTGTATAAAGtatatgaaaatgat
tttttagcaTTTGGTTATAGTTTAGATGGAATATTTCGCCGGCTAAAGGT
GTGA Coding sequence (CDS) from alignment at sc0000192_pilon:506862..508465+ >XLOC_039004 ID=XLOC_039004|Name=XLOC_039004|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2058bp|location=Sequence derived from alignment at sc0000192_pilon:506862..508465+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAACAAACTTTACGCGGTGTTCCTTCAAACTAGTGTTTACGGTTAC
CATCTTTGTTGCTATGGTCTACCTTTTGCATTATCAAGAACTGCTACAAG
TCAAGATAAAAATGATGCAAACAAACTTTACGCGGTGTTCCTTCAAACTA
GTGTTTACGGTTACCATCTTTGTTGCTATGGTCTACCTTTTGCATTATCA
AGAACTGCTACAAGTCAAGATAAAAATGCTCATGTCTTCATCTTCCAACC
AACCACCATACCATGAAACTGATATCAAGCAAATACAAGAAAAACGTCAC
AGACAACTTCAACAATATTGTTCCAACCAAAAGAAACAAACCATGATCAA
GAGCAGGAATCAATTCAGGAAATTTTTCGAACCAAGAGATAAGGAATCAT
TAAGAACGTTAAAACAGTTGATATACAACGATAGAGCAAAATTGATCTTT
TGTAGTGTCCCTAAAGTAGCATCTACAAACTGGAAACGTATTTTCCATAC
ACTTGAAGGACGCTTTCAAAATCCTACAGATCAAGACGGACGATTGATTC
ACCAAGGTTTGCCAGATATTACCGAGCTGTCAAAACCTGATCTACAATCT
CGTTTAAAAACtcatttttcgtttttattcACTAGACATCCTTTTGAAAG
AGTAGTTTCGGCCTATAGAGATAAGTTGTACAGTTCAAAAGATAAATACC
TACAACGTAAATATAACAAAATCATTTACAAACTGTATCGGAACGAATCG
TACACACCGGACAAAACACCCGTAACATTTGAAGAATTCATTCGGTATAT
TATCTATGAATGGAGAGACGGGAAAACGTATCGACTCAACTTACATTGGA
GACCTGTAACCTCGTTTTGTTTTCCATGTTTACTGAATTACACCTTCATT
GGAAAGTTGGAAACTATAAACCAAGATAGTTACCATATCACAAAGTATAT
AAATAATGTGACCAATTTGAATTTAGAGTTGCCAACAATCAGACGTTATA
AAACGGAAAGTCGGACTTCACTTTCTGATTACTATAAGAATATTTCGGAT
AGAATTTTGACTGATTTGTATAAAGtatatgaaaatgattttttagcaTT
TGGTTATAGTTTAGATGGAATATTTCGCCGGCTAAAGGTGTGACTCATGT
CTTCATCTTCCAACCAACCACCATACCATGAAACTGATATCAAGCAAATA
CAAGAAAAACGTCACAGACAACTTCAACAATATTGTTCCAACCAAAAGAA
ACAAACCATGATCAAGAGCAGGAATCAATTCAGGAAATTTTTCGAACCAA
GAGATAAGGAATCATTAAGAACGTTAAAACAGTTGATATACAACGATAGA
GCAAAATTGATCTTTTGTAGTGTCCCTAAAGTAGCATCTACAAACTGGAA
ACGTATTTTCCATACACTTGAAGGACGCTTTCAAAATCCTACAGATCAAG
ACGGACGATTGATTCACCAAGGTTTGCCAGATATTACCGAGCTGTCAAAA
CCTGATCTACAATCTCGTTTAAAAACtcatttttcgtttttattcACTAG
ACATCCTTTTGAAAGAGTAGTTTCGGCCTATAGAGATAAGTTGTACAGTT
CAAAAGATAAATACCTACAACGTAAATATAACAAAATCATTTACAAACTG
TATCGGAACGAATCGTACACACCGGACAAAACACCCGTAACATTTGAAGA
ATTCATTCGGTATATTATCTATGAATGGAGAGACGGGAAAACGTATCGAC
TCAACTTACATTGGAGACCTGTAACCTCGTTTTGTTTTCCATGTTTACTG
AATTACACCTTCATTGGAAAGTTGGAAACTATAAACCAAGATAGTTACCA
TATCACAAAGTATATAAATAATGTGACCAATTTGAATTTAGAGTTGCCAA
CAATCAGACGTTATAAAACGGAAAGTCGGACTTCACTTTCTGATTACTAT
AAGAATATTTCGGATAGAATTTTGACTGATTTGTATAAAGtatatgaaaa
tgattttttagcaTTTGGTTATAGTTTAGATGGAATATTTCGCCGGCTAA
AGGTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:506862..508465 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-1029:690 |
| Aaloc | 1-114:1 |
|
