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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:492655..495702- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039003 ID=XLOC_039003|Name=XLOC_039003|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3048bp|location=Sequence derived from alignment at sc0000192_pilon:492655..495702- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTCTACTCAAGACTCTGCTTAAATTATACTTCTTAATCAACACAAC
GACTCTGGTATTTACATGGGGTGTTTACACGACCCCCGGCACTACTCATT
CGACGTTTTCAGGACAGTACGGCGGTGGAGGGTACACTCATAGTCCACAC
TCCACTTCATCTACGAAGTTTAGAAACTATCTGATGAAATGTTATGATAG
CGATAGGCTTCCATCTTTAACAAAAACAAAACCAGGATATGACAATCCGT
TTCCATTGAGCAGCTTCTTAAAGCAATTAAATATTGGAATTGATATTGGT
TGGTATGGTTACCAATGCCGAATATGGACACGCCCTGGTGAATGTAGCTG
TGGCGAATCTTGCATATCCAAGGGTGACTGTTGTATTGATTTCTTATGGT
ATAAATATCACCAATTTCAATCTAGTGCCAAACATTACATCGAGAGTGTA
AAGAGTTTAACTAAAGGACAATCGTGTTTACCAATGTTTAGATATGTTCC
AGATATGTCCCTTTGGTCTGGTAATCACTATATCATGGTTGATTCTTGCT
TGCCAGGGGCCAATCAAACATATGTTGATGGTTGTGAGAAGGCTACAGTA
GTTGGTGAAAATAATAAGCCAGTTTATGGTAATGATCGTTATTTATATAA
GAACTCATACTGCGCACGGTGTAATAATGTTTTTCTTTATCGATATGATT
TCATGAAACTGTCTTGCAAGGTTTCTGTCTCGCGCAACAAGTATCCAGAT
CAATATTTATTGGCAGACACACCTTTTTATCAAGTCCTGCAGAAATACCC
TTGGTGTGGATTAGTTCCTCAATATGAAGATACAATTTTGAAGTGTGAAC
CAAACAAATGTAGCACCACAGATGCAATATTTTGTCAAATCTTTTTAGGG
TATTTCTTCAATGGAAAATATACAACTAAATCTACCAAAAATGTTTTTTG
TGAAAAATGTCGTTCTCAGAATCTTTTAGATGGTACAGTGAGAAAACCAT
GTAAGTCAATGCCTGATGGATGGTCCCTGGTCATCAATCTAAATAGTGGG
ATCAGTGATAACAAATGCGGTCTGAACGAGATCAAAATGGCAGGCGGGCT
GTGTAGAGCCATCCAATGTGGTCAAGGGCAACGTCTTGTCCAAGGACAAT
GTCAACAAATTTGCCAGATTGGATACACATTCTCAACCACTGAAAATAAA
TGCAAACCATTACCGTGCAGAATGGGATTTGATAGACAATCGAACGGCAA
ATGTGAATGTTTGACACCTAAATTCATCGATTCTACTGGATATTGCAGAA
GTTGTAATGGAGGATTTTCTCACTCATCAAAAACCCATAAATGCCAATCT
TTCAGAAATACGACCACCGAACCAATCAAGTCAAATCAAACAAATACAAG
ACGGCCCATGGTCGACGGTGAGCGCCAAAACAATCAACAATCATTCCGAT
GCTTGGATCAGATCCATCAAGCAATTTCTTTATTCATCTTCTTCCAAATC
AACACAAATAACAATGTCACCAAGGAAACAAATTATTCAACACTTTTCAA
TTTTCTTCGCAGAAGAAGTAATTGGAGAGTCTTGTATGAAAATCAAACTG
TTTTCGTTTTGGAATCAACAGATTTTGAATCTGATTTAAAATGGAAGGAA
AATCTCCTTAACGAAACACGTTATAACAAGCATATTGATAAAGCTGTTCT
TACCACAACAATCAAATTTCATGATCAAATCATTCCAAATCAATATGGGT
TCGATTTGACTAGATCTTTCAGTAACTACAGACTCTGTGGTAGATTCACT
GACGAAGTTATTCACAATGCAAATCGAACTTGTAACATGACAAAAACAGT
TGATTATAATCTGGATTCAAAACTAATATTCACAATACAGGATGGGATCG
TCTTTGAAGAGAAAATCTACTGTGAGGCATTTCATTTGCACTCAACGTGT
TCAAGACAAACAATATACCCATCAATCTATCAAATATCTCCAAATGGATC
TTTACTGATTGAAGGGGAATCTCCAAAATCTGCAAAACAAAAAGTCTATC
CCATTGATGAATATTTTCCACTTGCAGAAGGTTTTCAAATATGCATCGAA
GCTATTCGCAGTGGAATGACTCAACAGGAATTTGATTGGTCCAAAACTGT
TAAAAATGCAAAATATCATGTCTCGGTTATTGGAACATGTTTCAGCTTGT
TTTCATACCTCATGTTCCTCGTTACCTTGGCTGCAATAAAAAGCTTGAGA
AACACTGGTGGTTTATATATTACTGTTCTTGTTGCCTTTTTGCTATTCAG
TGATTCAATGTTCCTTGCTAATTTTCATTTAAGGAAAGGCTCTTTGTCTT
GTACAGGGATTTTTGTGGTTTTGTATTGGTCTTTGGTCAATGTTTTGATT
TGGAGTGGAATGGTCGCCATTGATATGATGTTGCAGTTTACCAAGAGATC
TCTGTCAAGATCTGATCGAAAGGAATCGGTGAAGATGCTTCAAAAGAGAC
TGCTTGCAACTATTGCGATCTCGACGATCATTTGTGGAACTCTGCTCATC
TTAAAGGAATCTGATTCTATTGTATTTGAGTTAGATTCTAAATATTGTTG
GTTCGGAAATTGGTATTGGTCTTTGGCGTTTTATTTTATTCCAGCTTCTA
TTGAGTATTTTACATGTTTGTTGTGTCTTTGTATGCTTTTGATTTCCATT
AGAAAGAAGAGTAGAGAATCTCAAAAAACTCTTGGAAAAGGACAACATAA
AGACGTTGGATTACTAAAAGTTGGAATTAAACTAATGCTCATTTTGGGAA
TAACAGAATTATTGGGTTTAGTTCAAATCAAACGATCTAACTTGACAGAA
AATGAGAGTATTCTCAATGCAGTTTTTGGATTGGTTTATGACGTTTTACG
ATCTTTTCGAGGTGTGTTTATTTTCGCATTCTACGCGATGAACAAGAACA
CAAAAACTGAATTTAAACAGCAGCTTTATGGGAAGAACAGGAAGAAGACT
CAAATTGAGTTGAGTAAAACTAAATCAACGTCAATCACAGAGAAATGA Coding sequence (CDS) from alignment at sc0000192_pilon:492655..495702- >XLOC_039003 ID=XLOC_039003|Name=XLOC_039003|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6096bp|location=Sequence derived from alignment at sc0000192_pilon:492655..495702- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTCTACTCAAGACTCTGCTTAAATTATACTTCTTAATCAACACAAC
GACTCTGGTATTTACATGGGGTGTTTACACGACCCCCGGCACTACTCATT
CGACGTTTTCAGGACAGTACGGCGGTGGAGGGTACACTCATAGTCCACAC
TCCACTTCATCTACGAAGTTTAGAAACTATCTGATGAAATGTTATGATAG
CGATAGGCTTCCATCTTTAACAAAAACAAAACCAGGATATGACAATCCGT
TTCCATTGAGCAGCTTCTTAAAGCAATTAAATATTGGAATTGATATTGGT
TGGTATGGTTACCAATGCCGAATATGGACACGCCCTGGTGAATGTAGCTG
TGGCGAATCTTGCATATCCAAGGGTGACTGTTGTATTGATTTCTTATGGT
ATAAATATCACCAATTTCAATCTAGTGCCAAACATTACATCGAGAGTGTA
AAGAGTTTAACTAAAGGACAATCGTGTTTACCAATGTTTAGATATGTTCC
AGATATGTCCCTTTGGTCTGGTAATCACTATATCATGGTTGATTCTTGCT
TGCCAGGGGCCAATCAAACATATGTTGATGGTTGTGAGAAGGCTACAGTA
GTTGGTGAAAATAATAAGCCAGTTTATGGTAATGATCGTTATTTATATAA
GAACTCATACTGCGCACGGTGTAATAATGTTTTTCTTTATCGATATGATT
TCATGAAACTGTCTTGCAAGGTTTCTGTCTCGCGCAACAAGTATCCAGAT
CAATATTTATTGGCAGACACACCTTTTTATCAAGTCCTGCAGAAATACCC
TTGGTGTGGATTAGTTCCTCAATATGAAGATACAATTTTGAAGTGTGAAC
CAAACAAATGTAGCACCACAGATGCAATATTTTGTCAAATCTTTTTAGGG
TATTTCTTCAATGGAAAATATACAACTAAATCTACCAAAAATGTTTTTTG
TGAAAAATGTCGTTCTCAGAATCTTTTAGATGGTACAGTGAGAAAACCAT
GTAAGTCAATGCCTGATGGATGGTCCCTGGTCATCAATCTAAATAGTGGG
ATCAGTGATAACAAATGCGGTCTGAACGAGATCAAAATGGCAGGCGGGCT
GTGTAGAGCCATCCAATGTGGTCAAGGGCAACGTCTTGTCCAAGGACAAT
GTCAACAAATTTGCCAGATTGGATACACATTCTCAACCACTGAAAATAAA
TGCAAACCATTACCGTGCAGAATGGGATTTGATAGACAATCGAACGGCAA
ATGTGAATGTTTGACACCTAAATTCATCGATTCTACTGGATATTGCAGAA
GTTGTAATGGAGGATTTTCTCACTCATCAAAAACCCATAAATGCCAATCT
TTCAGAAATACGACCACCGAACCAATCAAGTCAAATCAAACAAATACAAG
ACGGCCCATGGTCGACGGTGAGCGCCAAAACAATCAACAATCATTCCGAT
GCTTGGATCAGATCCATCAAGCAATTTCTTTATTCATCTTCTTCCAAATC
AACACAAATAACAATGTCACCAAGGAAACAAATTATTCAACACTTTTCAA
TTTTCTTCGCAGAAGAAGTAATTGGAGAGTCTTGTATGAAAATCAAACTG
TTTTCGTTTTGGAATCAACAGATTTTGAATCTGATTTAAAATGGAAGGAA
AATCTCCTTAACGAAACACGTTATAACAAGCATATTGATAAAGCTGTTCT
TACCACAACAATCAAATTTCATGATCAAATCATTCCAAATCAATATGGGT
TCGATTTGACTAGATCTTTCAGTAACTACAGACTCTGTGGTAGATTCACT
GACGAAGTTATTCACAATGCAAATCGAACTTGTAACATGACAAAAACAGT
TGATTATAATCTGGATTCAAAACTAATATTCACAATACAGGATGGGATCG
TCTTTGAAGAGAAAATCTACTGTGAGGCATTTCATTTGCACTCAACGTGT
TCAAGACAAACAATATACCCATCAATCTATCAAATATCTCCAAATGGATC
TTTACTGATTGAAGGGGAATCTCCAAAATCTGCAAAACAAAAAGTCTATC
CCATTGATGAATATTTTCCACTTGCAGAAGGTTTTCAAATATGCATCGAA
GCTATTCGCAGTGGAATGACTCAACAGGAATTTGATTGGTCCAAAACTGT
TAAAAATGCAAAATATCATGTCTCGGTTATTGGAACATGTTTCAGCTTGT
TTTCATACCTCATGTTCCTCGTTACCTTGGCTGCAATAAAAAGCTTGAGA
AACACTGGTGGTTTATATATTACTGTTCTTGTTGCCTTTTTGCTATTCAG
TGATTCAATGTTCCTTGCTAATTTTCATTTAAGGAAAGGCTCTTTGTCTT
GTACAGGGATTTTTGTGGTTTTGTATTGGTCTTTGGTCAATGTTTTGATT
TGGAGTGGAATGGTCGCCATTGATATGATGTTGCAGTTTACCAAGAGATC
TCTGTCAAGATCTGATCGAAAGGAATCGGTGAAGATGCTTCAAAAGAGAC
TGCTTGCAACTATTGCGATCTCGACGATCATTTGTGGAACTCTGCTCATC
TTAAAGGAATCTGATTCTATTGTATTTGAGTTAGATTCTAAATATTGTTG
GTTCGGAAATTGGTATTGGTCTTTGGCGTTTTATTTTATTCCAGCTTCTA
TTGAGTATTTTACATGTTTGTTGTGTCTTTGTATGCTTTTGATTTCCATT
AGAAAGAAGAGTAGAGAATCTCAAAAAACTCTTGGAAAAGGACAACATAA
AGACGTTGGATTACTAAAAGTTGGAATTAAACTAATGCTCATTTTGGGAA
TAACAGAATTATTGGGTTTAGTTCAAATCAAACGATCTAACTTGACAGAA
AATGAGAGTATTCTCAATGCAGTTTTTGGATTGGTTTATGACGTTTTACG
ATCTTTTCGAGGTGTGTTTATTTTCGCATTCTACGCGATGAACAAGAACA
CAAAAACTGAATTTAAACAGCAGCTTTATGGGAAGAACAGGAAGAAGACT
CAAATTGAGTTGAGTAAAACTAAATCAACGTCAATCACAGAGAAATGAAT
GACTCTACTCAAGACTCTGCTTAAATTATACTTCTTAATCAACACAACGA
CTCTGGTATTTACATGGGGTGTTTACACGACCCCCGGCACTACTCATTCG
ACGTTTTCAGGACAGTACGGCGGTGGAGGGTACACTCATAGTCCACACTC
CACTTCATCTACGAAGTTTAGAAACTATCTGATGAAATGTTATGATAGCG
ATAGGCTTCCATCTTTAACAAAAACAAAACCAGGATATGACAATCCGTTT
CCATTGAGCAGCTTCTTAAAGCAATTAAATATTGGAATTGATATTGGTTG
GTATGGTTACCAATGCCGAATATGGACACGCCCTGGTGAATGTAGCTGTG
GCGAATCTTGCATATCCAAGGGTGACTGTTGTATTGATTTCTTATGGTAT
AAATATCACCAATTTCAATCTAGTGCCAAACATTACATCGAGAGTGTAAA
GAGTTTAACTAAAGGACAATCGTGTTTACCAATGTTTAGATATGTTCCAG
ATATGTCCCTTTGGTCTGGTAATCACTATATCATGGTTGATTCTTGCTTG
CCAGGGGCCAATCAAACATATGTTGATGGTTGTGAGAAGGCTACAGTAGT
TGGTGAAAATAATAAGCCAGTTTATGGTAATGATCGTTATTTATATAAGA
ACTCATACTGCGCACGGTGTAATAATGTTTTTCTTTATCGATATGATTTC
ATGAAACTGTCTTGCAAGGTTTCTGTCTCGCGCAACAAGTATCCAGATCA
ATATTTATTGGCAGACACACCTTTTTATCAAGTCCTGCAGAAATACCCTT
GGTGTGGATTAGTTCCTCAATATGAAGATACAATTTTGAAGTGTGAACCA
AACAAATGTAGCACCACAGATGCAATATTTTGTCAAATCTTTTTAGGGTA
TTTCTTCAATGGAAAATATACAACTAAATCTACCAAAAATGTTTTTTGTG
AAAAATGTCGTTCTCAGAATCTTTTAGATGGTACAGTGAGAAAACCATGT
AAGTCAATGCCTGATGGATGGTCCCTGGTCATCAATCTAAATAGTGGGAT
CAGTGATAACAAATGCGGTCTGAACGAGATCAAAATGGCAGGCGGGCTGT
GTAGAGCCATCCAATGTGGTCAAGGGCAACGTCTTGTCCAAGGACAATGT
CAACAAATTTGCCAGATTGGATACACATTCTCAACCACTGAAAATAAATG
CAAACCATTACCGTGCAGAATGGGATTTGATAGACAATCGAACGGCAAAT
GTGAATGTTTGACACCTAAATTCATCGATTCTACTGGATATTGCAGAAGT
TGTAATGGAGGATTTTCTCACTCATCAAAAACCCATAAATGCCAATCTTT
CAGAAATACGACCACCGAACCAATCAAGTCAAATCAAACAAATACAAGAC
GGCCCATGGTCGACGGTGAGCGCCAAAACAATCAACAATCATTCCGATGC
TTGGATCAGATCCATCAAGCAATTTCTTTATTCATCTTCTTCCAAATCAA
CACAAATAACAATGTCACCAAGGAAACAAATTATTCAACACTTTTCAATT
TTCTTCGCAGAAGAAGTAATTGGAGAGTCTTGTATGAAAATCAAACTGTT
TTCGTTTTGGAATCAACAGATTTTGAATCTGATTTAAAATGGAAGGAAAA
TCTCCTTAACGAAACACGTTATAACAAGCATATTGATAAAGCTGTTCTTA
CCACAACAATCAAATTTCATGATCAAATCATTCCAAATCAATATGGGTTC
GATTTGACTAGATCTTTCAGTAACTACAGACTCTGTGGTAGATTCACTGA
CGAAGTTATTCACAATGCAAATCGAACTTGTAACATGACAAAAACAGTTG
ATTATAATCTGGATTCAAAACTAATATTCACAATACAGGATGGGATCGTC
TTTGAAGAGAAAATCTACTGTGAGGCATTTCATTTGCACTCAACGTGTTC
AAGACAAACAATATACCCATCAATCTATCAAATATCTCCAAATGGATCTT
TACTGATTGAAGGGGAATCTCCAAAATCTGCAAAACAAAAAGTCTATCCC
ATTGATGAATATTTTCCACTTGCAGAAGGTTTTCAAATATGCATCGAAGC
TATTCGCAGTGGAATGACTCAACAGGAATTTGATTGGTCCAAAACTGTTA
AAAATGCAAAATATCATGTCTCGGTTATTGGAACATGTTTCAGCTTGTTT
TCATACCTCATGTTCCTCGTTACCTTGGCTGCAATAAAAAGCTTGAGAAA
CACTGGTGGTTTATATATTACTGTTCTTGTTGCCTTTTTGCTATTCAGTG
ATTCAATGTTCCTTGCTAATTTTCATTTAAGGAAAGGCTCTTTGTCTTGT
ACAGGGATTTTTGTGGTTTTGTATTGGTCTTTGGTCAATGTTTTGATTTG
GAGTGGAATGGTCGCCATTGATATGATGTTGCAGTTTACCAAGAGATCTC
TGTCAAGATCTGATCGAAAGGAATCGGTGAAGATGCTTCAAAAGAGACTG
CTTGCAACTATTGCGATCTCGACGATCATTTGTGGAACTCTGCTCATCTT
AAAGGAATCTGATTCTATTGTATTTGAGTTAGATTCTAAATATTGTTGGT
TCGGAAATTGGTATTGGTCTTTGGCGTTTTATTTTATTCCAGCTTCTATT
GAGTATTTTACATGTTTGTTGTGTCTTTGTATGCTTTTGATTTCCATTAG
AAAGAAGAGTAGAGAATCTCAAAAAACTCTTGGAAAAGGACAACATAAAG
ACGTTGGATTACTAAAAGTTGGAATTAAACTAATGCTCATTTTGGGAATA
ACAGAATTATTGGGTTTAGTTCAAATCAAACGATCTAACTTGACAGAAAA
TGAGAGTATTCTCAATGCAGTTTTTGGATTGGTTTATGACGTTTTACGAT
CTTTTCGAGGTGTGTTTATTTTCGCATTCTACGCGATGAACAAGAACACA
AAAACTGAATTTAAACAGCAGCTTTATGGGAAGAACAGGAAGAAGACTCA
AATTGAGTTGAGTAAAACTAAATCAACGTCAATCACAGAGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:492655..495702 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1558-3045:1489 |
| Aaloc | 1-1557:3049 |
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