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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:268220..270612+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039001 ID=XLOC_039001|Name=XLOC_039001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2393bp|location=Sequence derived from alignment at sc0000192_pilon:268220..270612+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGCGGTTACGGCATTTTGGTGTGAGTTTTTCAGGCGACATGATTGCATC
AATCTTATTAGCTGTACCCGGTTTCTTTTTTATATGGATGTTAATCACTT
ATGTGGAACATTTGATCAGTTTGAGAAAATATCCGAAAGGACCATTCCCT
TTACCGCTGGTTGGTAATCTTTTGATGTTGAGCAAAACACCGTATTTGGA
TTTCATTGAAATTGGAAAGCGATATGGAGATGTTTTTAGTTTGAGTCTAG
GTAAGTGTGTTTGCTTTCTCctagtacagtggagtctcactaactcaaga
taaattttttcgAGCTAGAAGGAAATCTCGAGTAATGGAAATTGGTTTGT
AAGGCATCTTTGCCTGATGAGTTAAGGAGACAATTGAGTTATAAATAAGT
TCGAGTTGcaatttaaaattaattaacaaattaaaattttctcattcaga
gaaaatttaccaagttcaattatttttgaacCCACTCAATTCATAAAGCA
TCATTAtttaaaagtatcaatttttgagaaaaatgaatattCTGTTCTAA
ACTCTCGAGAAACATGGCCCCGAAAAGACAGAAAGAAATTTGTCTGGAAA
ATACCAAAATTGGGTGGTCTCTGTGTCAAAATGTACCTAAAATTTTTAGT
ACATaggtactaaaataccacttttctaaaatggggtggtggtatgcaag
aaattctcgaaaatccttttaataCACATATTTGTCCAAGTTGTCCTAAT
ACAACGAATTATTTAATTCTACATTTTTATCCAACATGCTGCGAACAATA
TTgcttctttttcagaaaaaattttttctgtctgtttgttaaatgaaaat
tgaagtttGGCCAAAAGCTTTTGTACAAGAGAAGataatataccgggtga
cccacgaaaaagttcaaaagtgttttttacacttttcgaaaagtgaattt
tgactttaaaagctcataagtagagaacaagttggtcaaatttgaaaagt
gatggctcaaattttaagttaggatatctactttctaaatatcaaaactc
caagcactttaggacatttgttcggcctcaagacgtcgggaaacgtctga
actttttcgtgggtcacccggtacataTAATCTCACTGTAAGTAATCTCA
ATTTTGTAGGAATGACTCGTATAGTCATTATCAACTCCTACACCAATATC
AAAGAAGCATTGATCACGCGAGGAACTGATTTTGCCGGACGTCCGACAGA
TAGTATCGTCAACCGTATTCCATCCAATAATTTCACCAGTGTCATATCCT
TTGATTACtccaaatcttttgttttcgttCGGAAACTTGCCTTCAAGAGT
CTTCACTTGTATGGAGCTGGTATGAAGAATATTGAAGACATTGTGATTGA
AGAAGTCGAAAAGATGTGCTCCATACTCACCAAAGAAGCTGGAAAGCCAG
TCCCAATCAGACATCATCTAGGTTGGTTTCAATTTattttcccttttact
tctattttgaaagaaagtcgtttgtctttttcttaaagattttattttta
cataagttttcCTGTTTCAtttcagacacatatttcatattgtctgccta
ttgttatattatgctgatataaacaaagaaatgtttttcttttcctcttt
ttgaccaatcttgccccacatccgtgtcaattcaatttgaaaaagcttgt
aaattaaaactgatgagtaagcaaacgatatcactcttatttaaaaacaa
agcctTTAAGCATATTTTTCGCTTTTGGAATAGGATAAGGTGGTTTTGGT
CAGGGGTTCAATATTTATAACGGATAGTTTCCTTGTACctcaaatgaaaa
gaaagattcttagtttatatatattttttagcgCATCGCAAATCCGCCAC
TGCACGGACTGTAAAGCTGGGCGATGCATCCAACATTATTGTTGCATGAA
ATGTGCAAGTCATAATATTgcaactttttaataaaaatggtggaaatcat
gttggatgaagtttgagcaccaaacatttcatccaacatttttatgaaat
taacGTCACCTTCATGTTGCTTCcaatgtttgacgtttttgtgcAAATGA
CTTTTCGTGCAACTTCGATTTTTTCCACGTGACTTTCATCCAACATTTCG
TCTAACAAAGAATTTGgaatgttggatcaaatgtcGGATGCATTTGCGCC
GCCTTAAGGTAGGAAGCTTCATTATTTTACCTGCTCAACATCATAGAAAT
ACTTCTTTTCATTCCCAGGAAATTCTCTGGTCAACACCATATGTCATCTT
TGCTTCAGTAAGAAATACGATTCACACGATCCTGAATTTCAACAGATTCT
GGAATCCATGAGAATGATTATCCAGGGTCTAGCACCTGGTTAA Coding sequence (CDS) from alignment at sc0000192_pilon:268220..270612+ >XLOC_039001 ID=XLOC_039001|Name=XLOC_039001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000192_pilon:268220..270612+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGCGGTTACGGCATTTTGGTGTGAGTTTTTCAGGCGACATGATTGCATC
AATCTTATTAGCTGTACCCGGTTTCTTTTTTATATGGATGTTAATCACTT
ATGTGGAACATTTGATCAGTTTGAGAAAATATCCGAAAGGACCATTCCCT
TTACCGCTGGTTGGTAATCTTTTGATGTTGAGCAAAACACCGTATTTGGA
TTTCATTGAAATTGGAAAGCGATATGGAGATGTTTTTAGTTTGAGTCTAG
TTGCGGTTACGGCATTTTGGTGTGAGTTTTTCAGGCGACATGATTGCATC
AATCTTATTAGCTGTACCCGGTTTCTTTTTTATATGGATGTTAATCACTT
ATGTGGAACATTTGATCAGTTTGAGAAAATATCCGAAAGGACCATTCCCT
TTACCGCTGGTTGGTAATCTTTTGATGTTGAGCAAAACACCGTATTTGGA
TTTCATTGAAATTGGAAAGCGATATGGAGATGTTTTTAGTTTGAGTCTAG
GAATGACTCGTATAGTCATTATCAACTCCTACACCAATATCAAAGAAGCA
TTGATCACGCGAGGAACTGATTTTGCCGGACGTCCGACAGATAGTATCGT
CAACCGTATTCCATCCAATAATTTCACCAGTGTCATATCCTTTGATTACt
ccaaatcttttgttttcgttCGGAAACTTGCCTTCAAGAGTCTTCACTTG
TATGGAGCTGGTATGAAGAATATTGAAGACATTGTGATTGAAGAAGTCGA
AAAGATGTGCTCCATACTCACCAAAGAAGCTGGAAAGCCAGTCCCAATCA
GACATCATCTAGGAATGACTCGTATAGTCATTATCAACTCCTACACCAAT
ATCAAAGAAGCATTGATCACGCGAGGAACTGATTTTGCCGGACGTCCGAC
AGATAGTATCGTCAACCGTATTCCATCCAATAATTTCACCAGTGTCATAT
CCTTTGATTACtccaaatcttttgttttcgttCGGAAACTTGCCTTCAAG
AGTCTTCACTTGTATGGAGCTGGTATGAAGAATATTGAAGACATTGTGAT
TGAAGAAGTCGAAAAGATGTGCTCCATACTCACCAAAGAAGCTGGAAAGC
CAGTCCCAATCAGACATCATCTAGGAAATTCTCTGGTCAACACCATATGT
CATCTTTGCTTCAGTAAGAAATACGATTCACACGATCCTGAATTTCAACA
GATTCTGGAATCCATGAGAATGATTATCCAGGGTCTAGCACCTGGTTAAG
AAATTCTCTGGTCAACACCATATGTCATCTTTGCTTCAGTAAGAAATACG
ATTCACACGATCCTGAATTTCAACAGATTCTGGAATCCATGAGAATGATT
ATCCAGGGTCTAGCACCTGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:268220..270612 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-687:2271 |
| Aaloc | 253-561:1162 |
| Aaloc | 1-249:1 |
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