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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:251132..253979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038999 ID=XLOC_038999|Name=XLOC_038999|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2848bp|location=Sequence derived from alignment at sc0000192_pilon:251132..253979+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttttcaagtgaaaaatatatcaaagaTCAACGTGAGAAAAGTGGTAG
ACGTAATCGGTTTGATTATTTACAATCTTTGGTCACTGAATTTCAAGATA
CTGATAATGAAGGTGAGAGTTGGATACAGGGGGATTTGTCTGCCTGATTT
CTAATAGTTGAATGtaacaatgaaaatattataAAGGTCTGGACGAGGTG
TTAAATGTGCCTGTTTTGTACTCGGAGATAACAACaaaaaaacgtaaatt
ttatgtTTCTATATTAGTTTACGTAACCTTTTGGATACACTGAAATTAGA
ACTTGTGATTTGACGAATCTTACAGCAGTTATTCGTATCATTCATGATTA
GGAAACCTTTGGCATTCATGATTAGGAAACCTTTGGCATTCAACTGTTTA
TTTGCAATATCGCTTTTAACGGAGTAACTTAATTTCGAAATTTCTGTGGc
tgttattttttcttttggatGATAACCTTTAAGCTTTATGTAATGTTTGA
TGAAAAGTTGGTGAtggaaaaaacaatttgaaaatttaagacaCAAGGAG
TTATGATTGTCATGTATAATCTCCTGAATTATCATAAACTTGACTCatca
aatgaaattttgttCTTTTAGAATCAAAACTGCAAATACTGGCCAACCTT
GGTAACTTTGCTTACGACCCCATCAACTTCAATCATCTGCGGGAACTGAA
TGTTGTTGATTTATTCATCGGTAAATTCTAAATTGTGTGATTTATttagt
ttaaaaaataatagaacATAATGCTGTGAAATATATTTTAGATAGAGTTT
CCATCTTTTCATTCTGAAGTGAAAGAATTCCAGATTTCATTTTGGAACAA
ATTTACTATATACTGTATTATACACTGTAACACAGGATTGTTTCTGCCCT
CACATTtcattttaacttattttaacTCAGATTTTTTCTTACAGATATGC
TAtctgaaaacaatgaaaaattcgTAGAATTTGGAATGGCTGGTTTGTGT
AACCTCTGTGTTGGTTGGTAACTTATCTTGTATTCAATCATATTTGATTT
ATCTTATAATTTAGTTTATCTTATAAACTGGATTCTATCCACCTACAATT
GGGTGTGTTATATCTCCCTAAGCTTGCCAAAAATGTGTCTGACATGCACT
TTCAGATTTAATAAGATGTCACGGAACTCCAGGCTCGGCCCCCTACTGTG
CTATACATTTTAACTTCGTTTTCATTCTTTGTTTCAGAGTCAACAAATAG
AGACCATATCATTAAGAATGAAGGTGTAGATGCCATTATGCAATGCTTCT
CAAGGTTAGCCGTAATGTTTTTtgaattgttaatttttttaccaaagatT
ACTTTAATCATTTCAAAATGTCCGTAtgtaataagaatttttttttctcc
aaaaactCTCCAATCTAGAATTATTGTAATCATTCAAATCTTCACTCTTT
CTTATAGCACTAATGAAGAAATAGTGTTGAATGCCATGACAACACTCATA
TATTTAGTCACACCAGCCACCAGGAAAGGTAAAATAGCCATCACCTCCTC
TACTAAATCTCAGATGAGATGATAAGACGTGTAACTTCAGTCCAAGGTTA
ttcaaaggctcctctttcaattGTTGTCCACCAGAAGAGAGGGGATGATC
TCACTCTTTCTCCTACAGTGTCTATTGTTGACCTTTCTCTGTAGTTTCCA
AGCACAAAACTATTAAGTCATTAGTAAGGTCTTACTGACCCTTATAACCC
CTGAACTCAACTAATTATATCCGCAATCCTTGTTTAGAGTTGTATTAAag
ttgtattcatgatatgcaccgctgcaatgtcttctgacatcacggaacca
attcatgatatgcaccactgcaatgacttcacgaaattatgcaatttttc
tgtatttgttccacccaatacgtctttttttctattgtttaagtgacgta
tcgggttgaactttttgaaaattctcagaagactctccagtggtgcatat
catgaatagctcattggttgtaagtgacgtaaaatcagtcaatacgtcac
actttcaaccaatcagctattgggtggaatggaagacattgcaatggtgc
atatcatgaatactctAATGGTAGTACTTCGCAATGTACAATTAGGGTAA
CTCAGATCATAGATTTTGTTTTGCTgcatattatattattttgaacCCTT
AATTTGACTCATTGTCAccattgaaatttgatttttaatcaaatttactT
CATCTGTTTTTAAGACATCATAACAGAAGAAATTGTGGATTGCATGAAAC
AATTGAAGACCTCAACAAATCCAAGATTGAAAAATCTTGCTACCATTTTC
CTACAGGTATAGCCTTTTTACCAAACCATTTATTATACAATTTGAAAGTG
CCAAACCACTAAAACGGCCTAGAGATGACTAAAAGAGCTACTTCACAGAG
CTATGATTTTTTATGTAAGAAAATTATGGAGAATCTgaacacagatttga
aatcattaagttttaaatattctaaaaagTATGATGTCATTATTTTTGAA
CCAGTAGGTTCAATCATCTTCAATTTAGACTTTATAATGATCTTAAATCT
ATTAGATAATTCTCCTCgagaatatctttttaacggtACATAACTTTCTA
ACATGGCGTAGAGGAGTGCTGAGGTATTGTTAAAATTAAAGTGTCAACAT
ATTTCAgactttatttttgaattcactttattttatcaaaattcctTCTG
ACTTCAGGATAATTGCCATGGTTGATGAAGATAACTCAGGAGGTTTAATT
TTTCAGCTGATACCCGTCAAATCAACCTATCTAATCAACTCTAACTGA Coding sequence (CDS) from alignment at sc0000192_pilon:251132..253979+ >XLOC_038999 ID=XLOC_038999|Name=XLOC_038999|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1104bp|location=Sequence derived from alignment at sc0000192_pilon:251132..253979+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttttcaagtgaaaaatatatcaaagaTCAACGTGAGAAAAGTGGTAG
ACGTAATCGGTTTGATTATTTACAATCTTTGGTCACTGAATTTCAAGATA
CTGATAATGAAGatgttttcaagtgaaaaatatatcaaagaTCAACGTGA
GAAAAGTGGTAGACGTAATCGGTTTGATTATTTACAATCTTTGGTCACTG
AATTTCAAGATACTGATAATGAAGAATCAAAACTGCAAATACTGGCCAAC
CTTGGTAACTTTGCTTACGACCCCATCAACTTCAATCATCTGCGGGAACT
GAATGTTGTTGATTTATTCATCGAATCAAAACTGCAAATACTGGCCAACC
TTGGTAACTTTGCTTACGACCCCATCAACTTCAATCATCTGCGGGAACTG
AATGTTGTTGATTTATTCATCGATATGCTAtctgaaaacaatgaaaaatt
cgTAGAATTTGGAATGGCTGGTTTGTGTAACCTCTGTGTTGATATGCTAt
ctgaaaacaatgaaaaattcgTAGAATTTGGAATGGCTGGTTTGTGTAAC
CTCTGTGTTGAGTCAACAAATAGAGACCATATCATTAAGAATGAAGGTGT
AGATGCCATTATGCAATGCTTCTCAAGAGTCAACAAATAGAGACCATATC
ATTAAGAATGAAGGTGTAGATGCCATTATGCAATGCTTCTCAAGCACTAA
TGAAGAAATAGTGTTGAATGCCATGACAACACTCATATATTTAGTCACAC
CAGCCACCAGGAAAGCACTAATGAAGAAATAGTGTTGAATGCCATGACAA
CACTCATATATTTAGTCACACCAGCCACCAGGAAAGACATCATAACAGAA
GAAATTGTGGATTGCATGAAACAATTGAAGACCTCAACAAATCCAAGATT
GAAAAATCTTGCTACCATTTTCCTACAGACATCATAACAGAAGAAATTGT
GGATTGCATGAAACAATTGAAGACCTCAACAAATCCAAGATTGAAAAATC
TTGCTACCATTTTCCTACAGCTGATACCCGTCAAATCAACCTATCTAATC
AACTCTAACTGACTGATACCCGTCAAATCAACCTATCTAATCAACTCTAA
CTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:251132..253979 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 511-552:2807 |
| Aaloc | 421-510:2267 |
| Aaloc | 349-417:1459 |
| Aaloc | 283-345:1240 |
| Aaloc | 214-279:947 |
| Aaloc | 115-210:624 |
| Aaloc | 1-111:1 |
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