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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000192_pilon:132079..134379+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038993 ID=XLOC_038993|Name=XLOC_038993|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2301bp|location=Sequence derived from alignment at sc0000192_pilon:132079..134379+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATTAGAGACAAAGATGTTAAAAAATAGCTTGGTAACAAGCGAGCC
TATCATTTTTCTATATTCATCAATTTATTACATCAATTTGTCAATCCTGC
CGCAACTGGTCTTGCAGAAAGTCTGTTTGGAGAAATATGATAATGGTCTT
GCTGGAAATGGTACTACATCATCGTCGTCATTGTGTGAAGAAAAGTCATC
AACGGTTATTACAAACGATATGCAAAAGGTAAAACAGTTACAgtgtgtat
tttttatttagctttacaggtttgcaggccaccgtgaagacacattGGCT
TCTATAAATtgctcgtactttttacaattgatatttccggactttccatt
ttgtgttgtctccCTTGAgtttagcattcatttttcggcttccttacacc
attctttgattatttgtctttcatttttggttaaatcctctgtcactcgg
taaggagGTTAAGGTAAGGTTAGTGTTCAAAGTAATTTATGCACCCCTAA
AAGGACATATTTGTACTTTATAAAGAAACAAAACGGGTTCCCAATTAGCT
ATAACAAAGTGAACTTGTGGTTAGAAATCATTCAATAGACGTCCCCTTCT
TATGCCCCCTCGgacctttattaagaaagctcccaaccctactgGTGCCC
CTActaggatccctacgggatcctaagttaggtCTCAGGGTACGGATACG
CCGAAGAAGGCCTttggccttatattgtgactctcgagctccaaccctaa
ccctaactgataataaccgaacccccgtctaggtccacagattgaaaaat
ttcacttgcatcctggcgTCAAAAATATCTGTCTAACTATTTTCATTAGC
AGGTAAAATATCGACATGAGCAATCTAACTactgtcttttttttttcaag
gaatCGTCACTTTGGTGGTTTGCCATTCTCGCTTCATCCCAAATACCTTC
AATTCTCACTGTCCTTATTTGGGGACCCATAAGCGACGTCATCGGCCGCA
AGAAGGCCATCCTTTTGGTCCCCATCATGAGTATCTTACAAAACATTATT
TTCCTCTTATGTTCATACTACATGAATTCATCCATCATTTACCTTTGTGT
TGGAATGTTCATGGCCTGTTTATTCGGCGAATTCCCCGGGGTACTGGCTC
TTTCGTGCGCCTTCATTGCAGATGTGACAACTGGACGAAAAGCAAAATCA
CGGACCTCGAGGATGGCTTTGGTGGATTGTGCTGTTAATTTGGCTGGAGT
TCCAGCAGGACTCTTTGCAGGACAATTACTAAAGCATTTAGGATTCACAG
CAGTGTTTGGACTTTCGATCGGTTTCAATGTGATAATCCTGTTATACATC
ATCTTTCTTCTCCCAGACACAAGAGCTATACAAATAGCTAACGAATTAGA
CTTCAAACAGTCGATGGAAATAAAGCCTGGTAAAAAGTCAACAACAAAAG
ATATTGTTATCTCCAATAAAGCCATTGATATTGATGTTACAGATATCGAA
TCTCCGGAAGTAAACGCGAGTGCTAAGCCGGCTACAAATCCTACTGATAA
TGACGTAACCGACACATCTAACCAAGAAACGAGAAAATTGAGCTGTGACC
TATTTATGCCACACAAGCAAATCTATCTTGTATACAAACTACTCTCATCC
AAAGGGATACGTCATTTGATCTTACCGCCTTTACTAGCATTCACATTCAT
CATTTACGCTTTTGTTGGTGAACTGACCCTGACATCATTGTATATCAAGA
ACGAACCTCTTGCATTGGAACCTGATTTCATAGGCTATTACTATGCCTCA
CAGGCTACTATTCGATGCTTTGGTTGCCTGGCAACAACACAAATAGCGAC
TCGAATTCTGAAAGCTTCAGATATTAATGTCTTGCTATTTGGCGTTGTTA
GTCAGATGGTATCCTACATTTTGATTGGCCTTTCCAAGAGTGAACTTTCA
GTTTTTATGGCAAATCTATCTAGTTTCGGTATCCCAGTAGCTTTAACAAT
ATCTAGAAGTTATACTTCAAAACAAGTCCCACCTGAACAGGTAGGAACAT
TAATGGCTGCCTTTGAATCCATAGATGCTCTTTCGTTTACGACAAATTTG
ATGTCTATCGAAGTTTACAATGCAACTCTCAGTAAATATGCCGGAGCTGT
CTGGTTCTTCTTGGCTGGATGTTCATTTATTGGATTTGCTTTGACATTGG
GAAATAAATTCTATCTTcttaagaaaaagaaatctgCTGATATAAACGGA
AATACGCCAGGCGTGACAACTAATAAAGCAGTGTCAGCTTCGGATGCTTG
A Coding sequence (CDS) from alignment at sc0000192_pilon:132079..134379+ >XLOC_038993 ID=XLOC_038993|Name=XLOC_038993|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3258bp|location=Sequence derived from alignment at sc0000192_pilon:132079..134379+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATTAGAGACAAAGATGTTAAAAAATAGCTTGGTAACAAGCGAGCC
TATCATTTTTCTATATTCATCAATTTATTACATCAATTTGTCAATCCTGC
CGCAACTGGTCTTGCAGAAAGTCTGTTTGGAGAAATATGATAATGGTCTT
GCTGGAAATGGTACTACATCATCGTCGTCATTGTGTGAAGAAAAGTCATC
AACGGTTATTACAAACGATATGCAAAAGAAGAAATTAGAGACAAAGATGT
TAAAAAATAGCTTGGTAACAAGCGAGCCTATCATTTTTCTATATTCATCA
ATTTATTACATCAATTTGTCAATCCTGCCGCAACTGGTCTTGCAGAAAGT
CTGTTTGGAGAAATATGATAATGGTCTTGCTGGAAATGGTACTACATCAT
CGTCGTCATTGTGTGAAGAAAAGTCATCAACGGTTATTACAAACGATATG
CAAAAGgaatCGTCACTTTGGTGGTTTGCCATTCTCGCTTCATCCCAAAT
ACCTTCAATTCTCACTGTCCTTATTTGGGGACCCATAAGCGACGTCATCG
GCCGCAAGAAGGCCATCCTTTTGGTCCCCATCATGAGTATCTTACAAAAC
ATTATTTTCCTCTTATGTTCATACTACATGAATTCATCCATCATTTACCT
TTGTGTTGGAATGTTCATGGCCTGTTTATTCGGCGAATTCCCCGGGGTAC
TGGCTCTTTCGTGCGCCTTCATTGCAGATGTGACAACTGGACGAAAAGCA
AAATCACGGACCTCGAGGATGGCTTTGGTGGATTGTGCTGTTAATTTGGC
TGGAGTTCCAGCAGGACTCTTTGCAGGACAATTACTAAAGCATTTAGGAT
TCACAGCAGTGTTTGGACTTTCGATCGGTTTCAATGTGATAATCCTGTTA
TACATCATCTTTCTTCTCCCAGACACAAGAGCTATACAAATAGCTAACGA
ATTAGACTTCAAACAGTCGATGGAAATAAAGCCTGGTAAAAAGTCAACAA
CAAAAGATATTGTTATCTCCAATAAAGCCATTGATATTGATGTTACAGAT
ATCGAATCTCCGGAAGTAAACGCGAGTGCTAAGCCGGCTACAAATCCTAC
TGATAATGACGTAACCGACACATCTAACCAAGAAACGAGAAAATTGAGCT
GTGACCTATTTATGCCACACAAGCAAATCTATCTTGTATACAAACTACTC
TCATCCAAAGGGATACGTCATTTGATCTTACCGCCTTTACTAGCATTCAC
ATTCATCATTTACGCTTTTGTTGGTGAACTGACCCTGACATCATTGTATA
TCAAGAACGAACCTCTTGCATTGGAACCTGATTTCATAGGCTATTACTAT
GCCTCACAGGCTACTATTCGATGCTTTGGTTGCCTGGCAACAACACAAAT
AGCGACTCGAATTCTGAAAGCTTCAGATATTAATGTCTTGCTATTTGGCG
TTGTTAGTCAGATGGTATCCTACATTTTGATTGGCCTTTCCAAGAGTGAA
CTTTCAGTTTTTATGGCAAATCTATCTAGTTTCGGTATCCCAGTAGCTTT
AACAATATCTAGAAGTTATACTTCAAAACAAGTCCCACCTGAACAGGTAG
GAACATTAATGGCTGCCTTTGAATCCATAGATGCTCTTTCGTTTACGACA
AATTTGATGTCTATCGAAGTTTACAATGCAACTCTCAGTAAATATGCCGG
AGCTGTCTGGTTCTTCTTGGCTGGATGTTCATTTATTGGATTTGCTTTGA
CATTGGGAAATAAATTCTATCTTcttaagaaaaagaaatctgCTGATATA
AACGGAAATACGCCAGGCGTGACAACTAATAAAGCAGTGTCAGCTTCGGA
TGCTTGAgaatCGTCACTTTGGTGGTTTGCCATTCTCGCTTCATCCCAAA
TACCTTCAATTCTCACTGTCCTTATTTGGGGACCCATAAGCGACGTCATC
GGCCGCAAGAAGGCCATCCTTTTGGTCCCCATCATGAGTATCTTACAAAA
CATTATTTTCCTCTTATGTTCATACTACATGAATTCATCCATCATTTACC
TTTGTGTTGGAATGTTCATGGCCTGTTTATTCGGCGAATTCCCCGGGGTA
CTGGCTCTTTCGTGCGCCTTCATTGCAGATGTGACAACTGGACGAAAAGC
AAAATCACGGACCTCGAGGATGGCTTTGGTGGATTGTGCTGTTAATTTGG
CTGGAGTTCCAGCAGGACTCTTTGCAGGACAATTACTAAAGCATTTAGGA
TTCACAGCAGTGTTTGGACTTTCGATCGGTTTCAATGTGATAATCCTGTT
ATACATCATCTTTCTTCTCCCAGACACAAGAGCTATACAAATAGCTAACG
AATTAGACTTCAAACAGTCGATGGAAATAAAGCCTGGTAAAAAGTCAACA
ACAAAAGATATTGTTATCTCCAATAAAGCCATTGATATTGATGTTACAGA
TATCGAATCTCCGGAAGTAAACGCGAGTGCTAAGCCGGCTACAAATCCTA
CTGATAATGACGTAACCGACACATCTAACCAAGAAACGAGAAAATTGAGC
TGTGACCTATTTATGCCACACAAGCAAATCTATCTTGTATACAAACTACT
CTCATCCAAAGGGATACGTCATTTGATCTTACCGCCTTTACTAGCATTCA
CATTCATCATTTACGCTTTTGTTGGTGAACTGACCCTGACATCATTGTAT
ATCAAGAACGAACCTCTTGCATTGGAACCTGATTTCATAGGCTATTACTA
TGCCTCACAGGCTACTATTCGATGCTTTGGTTGCCTGGCAACAACACAAA
TAGCGACTCGAATTCTGAAAGCTTCAGATATTAATGTCTTGCTATTTGGC
GTTGTTAGTCAGATGGTATCCTACATTTTGATTGGCCTTTCCAAGAGTGA
ACTTTCAGTTTTTATGGCAAATCTATCTAGTTTCGGTATCCCAGTAGCTT
TAACAATATCTAGAAGTTATACTTCAAAACAAGTCCCACCTGAACAGGTA
GGAACATTAATGGCTGCCTTTGAATCCATAGATGCTCTTTCGTTTACGAC
AAATTTGATGTCTATCGAAGTTTACAATGCAACTCTCAGTAAATATGCCG
GAGCTGTCTGGTTCTTCTTGGCTGGATGTTCATTTATTGGATTTGCTTTG
ACATTGGGAAATAAATTCTATCTTcttaagaaaaagaaatctgCTGATAT
AAACGGAAATACGCCAGGCGTGACAACTAATAAAGCAGTGTCAGCTTCGG
ATGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000192_pilon | genome | sc0000192_pilon:132079..134379 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 229-1629:901 |
| Aaloc | 1-228:1 |
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