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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:37276..40024- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038992 ID=XLOC_038992|Name=XLOC_038992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2749bp|location=Sequence derived from alignment at sc0000315_pilon:37276..40024- (Clytia hemisphaerica_ch_hm2_pilon)
GTACGACGAATCATTCTAACAATCACAATCTATTCAACGTTATCAACAAT
AACAAATTGTCAAATCTTGGAATTGAAAACACAAGAAGATCTTGAAGAAA
ACATTTTACAAAATGAAAAAGTTTGGTTAGTTTCAATCCATCAGACAGAG
AATCAACAAAGAGAAATTGTACATACTGAGGACCTTTATAGAGGAATATT
CAACGCTGCGCAGATTGAAAGAAGACAGATAGGCACAATTTTAGATGTAA
GTGACCAAAATTTTAAAATATCTTTCTCCAAAGAATGTCGATGTTGACCT
TTGTGTAAAGCTAAGCCTACACTGATGTCTTTTTCCTAGCGTCTGCAAAA
TGCAAGGTTCGCCGGATTTCCCTTTCTCTAATGAATGATATCATTATATA
TCCTATATTACTAAATCATGTTGGACGGTGAAAAAGAATGCGGCTATTAT
ACTTTCATTTATATTACTGTATTATCATGATTATAACGACTCCAGTCTAG
TCTCGATGCCTTGATTACAGTTTGTTTTTGTACTTGTTTGGTCATTGAAA
TGTAGGTCTTGTCACGTGACATAGTGTACTTAAATCTTATATGTAATTTG
TTTTTCAAAAGTGAAATTTAAGATATAAATAAATTCATAAAGAGTGTTAT
AGATAAACTATAAAACGAATTATGAAGATTTTCCCTTTCATCTGATATTC
TTTTTCCATACATACTGTATATCCCAATAAACAGAAAGGGTCCGAGCAAT
AAACCCTAATGGCGTGCGATAGCTAATGAGCTTTAAGTAGACCATGTCAC
GTGACAAGACCCACACCCCAGTGTCCAAACAATCAAAAGAACAAACTGTA
ATCAAGGCCTACACAGATAAGACTACCTTAAGGGAACTTATTTTGGCCGG
AACTAATTTTGGCGAATTTGGCGAAATTAGTTCCCACCAAAATTAAATAA
TTTGCTCACTCGCCAAAATAAGTTCTCGCCAAAATTAAATTTTTTGGTAT
TTTGCCTAAATAACTTCTTGAGTTCACAAATAACGCCTCAAATAAGGCAA
AGTAGAACAGATTTACGCTGTCTTTCGCCAAAATTAGTTCCCACCAAAAT
TAAAAAAATTCATCAATCGTCAAATTAAGTTCTCGCCAAAATTAAAAATT
TTCAGGATTTTTGCCGCTCTGACCGATAACCTAACAAGCTGCTTTTCATT
CTGTTTCAGAGCAGTTTAGCCAAAGAAACAAACTTCATTATTTTCCCATA
CGGCTCAAAACGTTCAAAACAAACGAAACAAAAACATGCTGTGAATCTAA
ATGAGGCTTTGAAGATCGTTTCGGAATTTATCCCCGATATCACAACCCGA
TTGGATTCGAATGTGGATGGGACGAATTCACAATTACGTGCATTCTTTCA
AAAGATTTTTATGACTCGACCAATCAAATTCCCTGTCATCTACTTTACAG
GTAATCCATCTCTTTTTGGCCCAACCTCTCGCTCGGTTTTAAAGGGACAT
AAAAGTAGTAAACATTGCGCGAACCACGTGTCATTAAAGAGAACAATTAA
AATCACATGTCCAAAACAAACTTGTGAAACAATAGAAACAATCAAAAATC
AGCCATATTTGTTTTGATTTTGACACGTGACATTTGTTTTGATTTTGTAT
CCCACTTCATACGGTTTGTTTACAAAGTTCGATAGTACTTTTATGTCCCT
TTAAAGGACATAATTTAGAACACCCCCTTCTCACAGACCCGCTGGTCCCC
CATCCCACTGGAAAAATAGACTAAAATATCGTCTTCAGTGGAATAAGTTA
TACTTTAATTGTTGTACCCGCTGAAAATAATCAAATAAGCAAATCCTCAT
TGAAAATTATTAATTCCATCCTCAGTGAATTTTCTGGCTAGAAAACAAGG
GAATTTAAATCCCCAGCCATAAAAACATGGGAATATCAAACTCTATCGAG
TGTTAAAGCGTTATTTTTACTCCCCCTGGCTAAAAAGATCCCACTGGGTC
AGTCAGAAGGGGTTGTTATCCATGGACACAAACCCTGGTTTTTCGGGCTC
TAAACCGGGTTTTCGGGCTCTAAACATTCGAATTTTTGACGTCACTTTTA
ATTTTCGAAGCTCCTGTTGTAGCAAAAGAATCGAATTTGCGTCAAAACAC
TTGAAAGGCTTTCTATTTTTCGAAAATCGTCAAAGTGAAACTCACTAAGA
AACGAGATGAAAAATCCCGGGTTTTAGTGAGGTGCACGCTAGTGAGAAAG
GGGTATAACATGAAATTTAAATCTTTTCATAATTCCTCTAATCAAATGAT
ATTTTATCTTTATAGAAAACAAAGAACCACCCATTGAAATTCGAGCGTTA
GCTTTGAAATATTCAAGTCTTTTTCAATTTGGAGTGATTTCAAGACCAAC
CAAAAACGCTTTAAACGCCTACGCAATAAAATCACTACCACACTTCAGTG
GATACATTATAGAGAATGTGACGTCACAGCCTCGCTTGAAGAATTACATT
TACCAAGGCCAGTTAAACGGTCCATCTGAGTATCCTTTCCTTGTACACTT
CTTGTATTTGCTACATAAAAATCATTTCAAGGAATTACCAAAAGTAAGGA
AGCCGAAAAGTAGTGATGACGTCAGAAATGCGGGAAAAGATGATGAGATT
GAACTTGATTTGGAGGAGACGTTTAGTGAAGATTTTGAATTATTTCATGA
ACTTTACAAAATGTTCCCCATGGAGTATGGGACCAAGGATGAATTATAG Coding sequence (CDS) from alignment at sc0000315_pilon:37276..40024- >XLOC_038992 ID=XLOC_038992|Name=XLOC_038992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1842bp|location=Sequence derived from alignment at sc0000315_pilon:37276..40024- (Clytia hemisphaerica_ch_hm2_pilon)
GTACGACGAATCATTCTAACAATCACAATCTATTCAACGTTATCAACAAT
AACAAATTGTCAAATCTTGGAATTGAAAACACAAGAAGATCTTGAAGAAA
ACATTTTACAAAATGAAAAAGTTTGGTTAGTTTCAATCCATCAGACAGAG
AATCAACAAAGAGAAATTGTACATACTGAGGACCTTTATAGAGGAATATT
CAACGCTGCGCAGATTGAAAGAAGACAGATAGGCACAATTTTAGATGTAC
GACGAATCATTCTAACAATCACAATCTATTCAACGTTATCAACAATAACA
AATTGTCAAATCTTGGAATTGAAAACACAAGAAGATCTTGAAGAAAACAT
TTTACAAAATGAAAAAGTTTGGTTAGTTTCAATCCATCAGACAGAGAATC
AACAAAGAGAAATTGTACATACTGAGGACCTTTATAGAGGAATATTCAAC
GCTGCGCAGATTGAAAGAAGACAGATAGGCACAATTTTAGATAGCAGTTT
AGCCAAAGAAACAAACTTCATTATTTTCCCATACGGCTCAAAACGTTCAA
AACAAACGAAACAAAAACATGCTGTGAATCTAAATGAGGCTTTGAAGATC
GTTTCGGAATTTATCCCCGATATCACAACCCGATTGGATTCGAATGTGGA
TGGGACGAATTCACAATTACGTGCATTCTTTCAAAAGATTTTTATGACTC
GACCAATCAAATTCCCTGTCATCTACTTTACAGAGCAGTTTAGCCAAAGA
AACAAACTTCATTATTTTCCCATACGGCTCAAAACGTTCAAAACAAACGA
AACAAAAACATGCTGTGAATCTAAATGAGGCTTTGAAGATCGTTTCGGAA
TTTATCCCCGATATCACAACCCGATTGGATTCGAATGTGGATGGGACGAA
TTCACAATTACGTGCATTCTTTCAAAAGATTTTTATGACTCGACCAATCA
AATTCCCTGTCATCTACTTTACAGAAAACAAAGAACCACCCATTGAAATT
CGAGCGTTAGCTTTGAAATATTCAAGTCTTTTTCAATTTGGAGTGATTTC
AAGACCAACCAAAAACGCTTTAAACGCCTACGCAATAAAATCACTACCAC
ACTTCAGTGGATACATTATAGAGAATGTGACGTCACAGCCTCGCTTGAAG
AATTACATTTACCAAGGCCAGTTAAACGGTCCATCTGAGTATCCTTTCCT
TGTACACTTCTTGTATTTGCTACATAAAAATCATTTCAAGGAATTACCAA
AAGTAAGGAAGCCGAAAAGTAGTGATGACGTCAGAAATGCGGGAAAAGAT
GATGAGATTGAACTTGATTTGGAGGAGACGTTTAGTGAAGATTTTGAATT
ATTTCATGAACTTTACAAAATGTTCCCCATGGAGTATGGGACCAAGGATG
AATTATAGAAAACAAAGAACCACCCATTGAAATTCGAGCGTTAGCTTTGA
AATATTCAAGTCTTTTTCAATTTGGAGTGATTTCAAGACCAACCAAAAAC
GCTTTAAACGCCTACGCAATAAAATCACTACCACACTTCAGTGGATACAT
TATAGAGAATGTGACGTCACAGCCTCGCTTGAAGAATTACATTTACCAAG
GCCAGTTAAACGGTCCATCTGAGTATCCTTTCCTTGTACACTTCTTGTAT
TTGCTACATAAAAATCATTTCAAGGAATTACCAAAAGTAAGGAAGCCGAA
AAGTAGTGATGACGTCAGAAATGCGGGAAAAGATGATGAGATTGAACTTG
ATTTGGAGGAGACGTTTAGTGAAGATTTTGAATTATTTCATGAACTTTAC
AAAATGTTCCCCATGGAGTATGGGACCAAGGATGAATTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:37276..40024 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 508-939:433 |
| Aaloc | 265-504:1541 |
| Aaloc | 19-264:2750 |
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