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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000315_pilon:104094..108242- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038990 ID=XLOC_038990|Name=XLOC_038990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4149bp|location=Sequence derived from alignment at sc0000315_pilon:104094..108242- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTTTTCAAACGAAATTCACAGTTTTAAAAAGAATTCACTTTGCAC
TACAGATACAGTGTTGACAAAACTTGATGGAACCAAGGTAAGTGCCACTA
TTATCTTATATCCATCGCTGTCCGGGAGGCCCCGAAATCGTTCCACGGAG
CGAGTTAGAACAATTTTTGCCGGCTTTTGACGATACTTTGAGGAACTTTG
AAGGACCCACACCAGTGAAAGGACTCACATCCCTCCTAACCAGTGAACCC
CGGGCTGGGATAGCGAATTCCAGATTTTTTTTTTTTTGTTTTTTGTTTTT
TTCCTTGTCAGTGTATCAGCCTCTTGTGTTTTCTTAATCACTAACACCAG
GTTGCCTTGGCCCTAGTTCAAGCTCGTTTAACACTAATTCCCAGGTCAGC
ATCAATTTACGTTCTTGAAGCCCTTTCCAATTAACTCTTACTTAACACAA
GGAGTAATTTCTAGTATAATTTCTAGCATTTCTAACTTTTAGTGATTTAT
TTACATGATTTTTATTTATGTAATTTATTTTACCTTTTTATTTTACACGA
AGCTAATGAAACTTCCTATTTTGTTGCAAGTTTATCACCCCCAATTTACA
TTTTCAGCTTGAGGATTCAACTTAATTTCAACTCCTAGTTTTCAATACAT
GCCTTCACATTTTGGTATTCTCAGCACCAAGCCATTATGTTAAGCTTTGT
GTCAATATTCTCAGCCTTTAATTCTCAACTTTACTACTTATCCTTGGTTT
GATATGAGCTTTTTCTTTAGGAATTTTATATTATAAACTATTTTTGAATA
AAGAACCAAACATTTTATTTTAACTCATTTTCATTTATATTTTTTTTGTT
AAATGTTTTTATATGTAGGGAGAACGAACATGTATGTTTTGTTACTACTT
AAATATATAGACTGATAGATAGATAGATAGAAGTCACGCAACTATCATTG
ACGTCAAACCAAATGTTTCATTTTTCCATGAACTTTGAACCCTTCTAACT
TTTTTTCTATGTATGCTAAAGCGTTCCGGTTTTTAATAAAAGAAAGCCTT
TGATCTTAGCTTTCCAGCGATAACACTGTGGACTCGGGCTAGACGGCAAA
TTGGTAAAGTGCGGAACGTTTTTGCAACATTTTTGAATTGTCTTCCGACG
GGAGAAAAAGAATTTGCAACTATCGATGAACAAATGTTTCTGGAAATGGA
GGAAATTGTTGTTAAAGGCTGAAACTTTGTATGTTTATCAGAAAAAGGGT
GAGGAATTCAAAAATCACAATCGCTAATTTTAGTTCTTTGATTATCATGT
AGTTTTTTTCACTTTTTCGCTTCTTGAGCATGGGAATGTCCCAAAAAAAA
GTTTATTTTTCTGCCGAAATGGATTTTTCTTTTCATTTGGGGTTTCTCCT
TTCAGAAAAACTTATTCTTTACTTATAACTTTTTGTTCCTCCATTTCCAG
AGGCCCCTTGAAAATGGGTCCTACCACCTTTTTTTGACTCATTTCAACCT
TTTCCAAGCTACTTTTCTTCAAAAACAAAATAAAACAATGCAATGTCTTC
TTTTTTCAAAAAAAGATATATCTTTCGTTATTTTCATAAATATACTAAAT
ATTTTACTAATATTTTTATATAATAATATTCTAACACCATCAAAGAATTA
TCCCTCCAAATTTCAGGTCTCTAGCTACACTATAGAAAAAGAGATATGCA
AAATTAAAGAAGCATGACTTGGAAATATTTTTTTTTCTTTTTTGACACAT
TTTTCGAATTTTTCCAAGCTATTTTCCTGACCTTTTTTTTGACATTTTTA
GTCAAATTTTTGACACTAAAATTTGAATATCTTTACAACCACTTATCCTC
TGGAGGCCTATGACCCCTCATTTTCTTTCTTTTTCAAAGCTCTACAAGAT
AGGATAAGTTTAAAAAAAACAATAAAAATTTGAAACAATCTCTGGAGTTG
CTAGCTGGGACCCCCAGGGGCCGTCCGCGTTGGTACCAAAGAAAGTCAAA
GAAAGTTTTTTTTTCTTCATTTTTTTGACGAATTTTCGAAATGTTTTATT
ACCGTCAACTGCTCTGACTTGTCTGGTCTGTATTTTCACTTACTGTAAAA
TTGAAAGCAGAAAGAGAAATCGTGTAGTTTTTAATACGCCGTTCCTTAAC
TCAAATCAAATGACTTTGGAGGTTCGGTGAAATGGTGGCCGAATTGCCGT
TCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTCAGCTGACGGTTGC
TTCTTATCTATAGGCTATTTTCATTCTCAGGTTTTTATTTATTGTAAATA
GATATGTTAAAACGAAAAGAAACCTTATAAACTTAGCTACATTTGATATT
TTAGTCGCGTTTAATAGCCGTAGTAGGGTATATCTTTTACAGTAAGACAT
AGCATCATTGTTATAACATTTTTTAACAAGCAAGCACTTAAGCTAATGAC
CTGCAAAAGCGGAGGCAAAAATCAGTTTTTTGAATAAGTTTACAAATAAA
CACCACATCAAAGATCTTTCAAGTTCAGTATGAAAATTATTGCTACAGCC
CCCCCCCCCCGCGTTGGATTTTGTCTAGCCTCTGAATTTTTTTCCAGTGC
CAGTGGTGGTTGGAAATTCCGATGAAAATTGATGATGTACTTTCGCAAAA
TGCTTAATACATTATAGTCAAATCGACTGACTTTGGAGTCTGAATACAAT
TCAATGTGTTTCAATATAAGATTGTTTTTCCAAGTAGGGCCTTTTACCAG
GATCCCTTTATTCCTGATTAGTAAACGTAAACGTTCTATTATCTTTTACT
TTTTTCCATTTCATAGGTTAAAGAAAAGAGTGGAGAGTCAATTCCTACTG
ATGGAGGTGATTTTTTTGTTGTTGATGACTCTCCCGATGAAAATTTACGC
CATGTTATTGATGGACTATTTATCAGCTCGCAAGATGCCTCAGCCAATCT
TCAAGAATTAAAGGAGAACAAAATCACACACATCTTAAACGTAGCCATAG
GATGTCAAAACCATTTTAAGGAGGTAAATCTAATGTTTTTTATTCAGACC
TTTAGCTTTGTTTTTGAAAAATATATATGGTGAAGAGATCTGACCTTGTG
ATCTGAAATTGTGAAAGTTAGCTATATATAGGAAACATTTAATTATTATT
TAACAGTTATGCGGTCTTTTACACACTATTTTAAAAATCCTTTGTGTTGA
ATTGAAAAATATAAATCTGAAATCAAAATTAAATACACTTTGAGCTTGGG
GAGTTAGTATTTAAATCGAAAGTTTCAATGCACAGTTCTTTTTTTCCTTG
TAGCATTTCACATACAAGAAGTTGGAAATATTGGATATACCTGAGTATGA
CATAAGCAAACATTTTGAAGAATGCGTTGGTTTTATACATGAAGCAATCA
CAAATGGTGGCCAAGTTTTATGCCATTGGTAAGAGATACATAATACAAAA
AAACTAGTATTTGGAAAACACCCGATCTTTGAATTTTTAGGGGGATAATT
TTGCGAATTCCTTCCTGTATTACAGAGATCTGGTAGGACCCCTCCCAAAT
GATGAAAAATATGACCGAAATATTGTCCCAGTAGCAGAAACAGCCGAATA
TTTCGTAGGCTGCTGGCATCCACTAACGGATTCGCGCTACTTACTCTCTT
GGGTAGAGGTCTACATTGGGTCATTCAGTCTAAAATAAAGGCAACCGATC
GAAAATAAAATGGAGAAAAATCCTTATTGGAATCTGATGACAACTATTAT
TCCTGTAAATGAAAAGGGGTATTGAGGTAGAGTTATTTGTCGCACGTTAC
CGAGTAAAATAATTTCGAAGGCACCTGAATGATCAGGAAATATGTAGAAA
AACTTTAGGAGAAAATTATGTCATCGAATTGAAAAATAGACCAGTTTTCC
ATATTTTATGTATCTTTCTGTTTTTCTTTTTTCTTTCTCTCTCAACACCA
TAAGTTTCAATTCTTTTTTATTAGCAATGCTGGTATATCTCGGTCATCAA
CCATCATAGGTGTATACTTGATGCAAAAACATGAAATGTCTTTACAAGAT
GCTTTAACAGCAATTCGAAAGAACCGTCCAGCAGCACGACCAAATGATGG
GTTCATGCTATCATTGAAACAGTACGAAGAAAAACTGAAGAAATGCTGA Coding sequence (CDS) from alignment at sc0000315_pilon:104094..108242- >XLOC_038990 ID=XLOC_038990|Name=XLOC_038990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1188bp|location=Sequence derived from alignment at sc0000315_pilon:104094..108242- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTTTTCAAACGAAATTCACAGTTTTAAAAAGAATTCACTTTGCAC
TACAGATACAGTGTTGACAAAACTTGATGGAACCAAGATGGCCTTTTCAA
ACGAAATTCACAGTTTTAAAAAGAATTCACTTTGCACTACAGATACAGTG
TTGACAAAACTTGATGGAACCAAGGTTAAAGAAAAGAGTGGAGAGTCAAT
TCCTACTGATGGAGGTGATTTTTTTGTTGTTGATGACTCTCCCGATGAAA
ATTTACGCCATGTTATTGATGGACTATTTATCAGCTCGCAAGATGCCTCA
GCCAATCTTCAAGAATTAAAGGAGAACAAAATCACACACATCTTAAACGT
AGCCATAGGATGTCAAAACCATTTTAAGGAGGTTAAAGAAAAGAGTGGAG
AGTCAATTCCTACTGATGGAGGTGATTTTTTTGTTGTTGATGACTCTCCC
GATGAAAATTTACGCCATGTTATTGATGGACTATTTATCAGCTCGCAAGA
TGCCTCAGCCAATCTTCAAGAATTAAAGGAGAACAAAATCACACACATCT
TAAACGTAGCCATAGGATGTCAAAACCATTTTAAGGAGCATTTCACATAC
AAGAAGTTGGAAATATTGGATATACCTGAGTATGACATAAGCAAACATTT
TGAAGAATGCGTTGGTTTTATACATGAAGCAATCACAAATGGTGGCCAAG
TTTTATGCCATTGCATTTCACATACAAGAAGTTGGAAATATTGGATATAC
CTGAGTATGACATAAGCAAACATTTTGAAGAATGCGTTGGTTTTATACAT
GAAGCAATCACAAATGGTGGCCAAGTTTTATGCCATTGCAATGCTGGTAT
ATCTCGGTCATCAACCATCATAGGTGTATACTTGATGCAAAAACATGAAA
TGTCTTTACAAGATGCTTTAACAGCAATTCGAAAGAACCGTCCAGCAGCA
CGACCAAATGATGGGTTCATGCTATCATTGAAACAGTACGAAGAAAAACT
GAAGAAATGCTGACAATGCTGGTATATCTCGGTCATCAACCATCATAGGT
GTATACTTGATGCAAAAACATGAAATGTCTTTACAAGATGCTTTAACAGC
AATTCGAAAGAACCGTCCAGCAGCACGACCAAATGATGGGTTCATGCTAT
CATTGAAACAGTACGAAGAAAAACTGAAGAAATGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000315_pilon | genome | sc0000315_pilon:104094..108242 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 421-594:175 |
| Aaloc | 295-417:847 |
| Aaloc | 88-294:1334 |
| Aaloc | 1-87:4150 |
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