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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:1058337..1060696+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038986 ID=XLOC_038986|Name=XLOC_038986|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2360bp|location=Sequence derived from alignment at sc0000019_pilon:1058337..1060696+ (Clytia hemisphaerica_ch_hm2_pilon)
acAGAGGTTGCATACAACTTTCAAAAAGCGAGCAATGTCAATTCTTTGGG
AACACCTTACGATCTTCATTCAATGATGCATTACAGGTATGGCTGTATTT
ACACTACAAAGAACGGTTGCATTTACAATACCAAATATTTAATATAAGTG
AGACCGCTATTTGCTTTTTCTCTACAATATCTTATATATTTAGTGCTTTG
AATGTCTGTTTCCAGGTCATTATCCACCTCCTCGTAATGAATGAATGTTT
ATTGTCATCTTTTGTCTTATCTCTAGAATAATCTCTCCCAGCCggcaaaa
aaacgtttaaaaaacgtttaaaaaacgtttttcacaacgtttggaaaacg
ttttttttcaggttgtatTTGTCGCACTTTACAACGTTTTTTCACAACGT
CCCTTCACAACGTaatttaaacctaaaaaaaacgttttgaaaacgttgtg
tgccagctggctttaactttttgactttcaGATAAATTTTAGGAGTAAAA
TTAGAGTTGAATGCCTCCTAAGCTATTATCTGATTTCGTACTCGAATACT
ACTCATGGCTAGTTATTCAGGCGCTTGTCTAATGAGTGGATAACATTCTT
TCTAGGCCTGTGTTAGGCTGGTTCATTGAGTTCATTCATTGATTCATTTG
TCCGAGACTTTGGGTAGCCTGTTTCATTTTCTTATGGTTTAGAAATAcaa
tgattgtattaacctctacccattcaaattttaaatccaACTCTAATGAA
ACTTTCAGATCTTtcatataaaacttactaatcaagctaattacaggttt
ctaaaactcaaaatcacaaagacgggggtaactctcgggacgggaatttt
atacacgatacacatcccctatatcaaaaaattcaaaggggAAGAGGCGT
GCAGCTTAATAACACCTCCGAAAATCTTTATTCTCTCTACTAGTTCAACA
GCTTTCGCAAGAGCAGGGACACGAACAATTGTGACGAAGGATCGATCAAA
ACAATCGATTATCGATACTAATAATCGAATAAGTGGATTCAGTGAAATCG
ATATCAAACAAATCAACCTCATGTACAAGAACGAATGCGGAGGTATCAAG
TGCcttgaattttctattttaattgcattctaGATTGCAAACCTGGtttt
tatataagcaaaaatccTTGCTTTAGATTCGTACagattttatgaaacta
tatgGTTTGTGATTTTGGAGCTATACGTTTCTTtctaaacaatttttgaa
gctttctgagggttctttacatttttaatttcaaagcattgaaatttcct
tgaatttgaaatatttcttatcTCCATACTTAGGAATTACAATGTTGCAA
CGTGTATAACATATTTTTTCCTCCCAATATTCTCAGGTGGTTCCGGTGGA
AATGGCGGAAATGGTGGTGGAAACAATAACTGTCAAGATAAAGATGGAAA
TTGTGCATCATGGGCCCAACAAGGTTATTGTAGCAACTCTCAACACGGAC
CCTGGATGAAAAGCAATTGCTGTAAATCATGCACAGGTAAGTTCACTACC
TTTTaaaaaaaCTCTTAGACTTAGGTATTTGCAAATTAATTAGGAGAAGA
CTTGGATAAATTaggttttttataatggaatatgTTTATTAGGTATTCTA
AAGTAGAAGATTCTAAAATGTTACGTAACAGAAGAAATGAAATTAAAGCT
CGTCAAGAATTtacatttctttgaaaaagtcattttcaaatttcgaaaag
tcaaaaattcagctaaaaatatattttagacCTTGAGAAGGTTGAGTTCT
GAAAGTCTAGCCCCCATGGCGCAATTTTCAACCTTTCAATATAAAGAACT
ATTGTTTATTTTAACAAAATGATTCAGATCCTCATCATTAAGCCAATACA
AGTTGCAATACTTAGCCAATCTTTTCACTCCGATATTCATGACATAATGA
CTTGTAAGGAACccgggggcactcatatggtccgacccaaAATTACTGTA
TGTAAGGGTCAGAAGCGTTCGGTaaaatgtactgtaagggtaccttttca
ctgtAAGGGCAGATGCTGTCGTTTAGaaatcaagtgaaaaataagaaatc
acTCCTAATAGTCTGTTACTAGTCTTTTTGTTGTTGATGAATTCAAACGT
GACAAGCAGTCATTTTTGGGTGCttctgtataaaacattacgtcataaat
atcatgaatttctgCTTTACTACCAGGAACCGGTGGAGGATCGACTTGTG
CTGGAGATCGCCATCAATATTGTTCAACTTGGGCTGCGCGTGGTTATTGC
ACATCTCAACAACATTTAACTTACATGAGACAAAATTGTTGTAAATCTTG
TAGATTTTAA Coding sequence (CDS) from alignment at sc0000019_pilon:1058337..1060696+ >XLOC_038986 ID=XLOC_038986|Name=XLOC_038986|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000019_pilon:1058337..1060696+ (Clytia hemisphaerica_ch_hm2_pilon)
acAGAGGTTGCATACAACTTTCAAAAAGCGAGCAATGTCAATTCTTTGGG
AACACCTTACGATCTTCATTCAATGATGCATTACAGacAGAGGTTGCATA
CAACTTTCAAAAAGCGAGCAATGTCAATTCTTTGGGAACACCTTACGATC
TTCATTCAATGATGCATTACAGTTCAACAGCTTTCGCAAGAGCAGGGACA
CGAACAATTGTGACGAAGGATCGATCAAAACAATCGATTATCGATACTAA
TAATCGAATAAGTGGATTCAGTGAAATCGATATCAAACAAATCAACCTCA
TGTACAAGAACGAATGCGGAGTTCAACAGCTTTCGCAAGAGCAGGGACAC
GAACAATTGTGACGAAGGATCGATCAAAACAATCGATTATCGATACTAAT
AATCGAATAAGTGGATTCAGTGAAATCGATATCAAACAAATCAACCTCAT
GTACAAGAACGAATGCGGAGGTGGTTCCGGTGGAAATGGCGGAAATGGTG
GTGGAAACAATAACTGTCAAGATAAAGATGGAAATTGTGCATCATGGGCC
CAACAAGGTTATTGTAGCAACTCTCAACACGGACCCTGGATGAAAAGCAA
TTGCTGTAAATCATGCACAGGTGGTTCCGGTGGAAATGGCGGAAATGGTG
GTGGAAACAATAACTGTCAAGATAAAGATGGAAATTGTGCATCATGGGCC
CAACAAGGTTATTGTAGCAACTCTCAACACGGACCCTGGATGAAAAGCAA
TTGCTGTAAATCATGCACAGGAACCGGTGGAGGATCGACTTGTGCTGGAG
ATCGCCATCAATATTGTTCAACTTGGGCTGCGCGTGGTTATTGCACATCT
CAACAACATTTAACTTACATGAGACAAAATTGTTGTAAATCTTGTAGATT
TTAAGAACCGGTGGAGGATCGACTTGTGCTGGAGATCGCCATCAATATTG
TTCAACTTGGGCTGCGCGTGGTTATTGCACATCTCAACAACATTTAACTT
ACATGAGACAAAATTGTTGTAAATCTTGTAGATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:1058337..1060696 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 388-519:2229 |
| Aaloc | 238-384:1389 |
| Aaloc | 88-234:945 |
| Aaloc | 1-84:1 |
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