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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:933046..936386+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038980 ID=XLOC_038980|Name=XLOC_038980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3341bp|location=Sequence derived from alignment at sc0000019_pilon:933046..936386+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTGGTGTTAAAATGAGGATGAGAACACTTATTTCGAGTAAGCCAAA
TTTCGCGAAAACATGGAAAAAGCCAGCAAGTATAATCGAAGAAACGGTTG
ATTGTAACAATGTAGTTATGCAACCTAAAGTTGCGTTTGTGGTAAGGAAG
AAACATATTTAATTTTGAAGCGAGATAGATATGTTAAGTaggtttgcgac
cgcagtcgaggtcGACCCAAAGGCTCTCTTTTCtctagctatctacccga
aggtaggatttctccacttactcttaggtgccaaataaacgggggggttg
gaaaattttcgaaattttaataaacggggggtacctaattgccggggggg
gttggaaattgtacttctgaaaccccaaaaataaggtaaatataggctaa
aatcaggctattaagagcaaaataaggggccttctctttgacagctgaaa
atattcttaagaattaataaacgtgggggtccttataaggtccggggggg
gttggaaaattttcgaaaaattaacaagcgggggggcccgtttatttggc
acctaagagtaccctCCACCATCTTAGGAATCGTTGGTATGACCCGACTG
caacaaccttgcgcaccgtagctagCTGGATGCTCTCATTTCATACTAAA
GACTTTTAATTTGATGATTCTGGCGTTGAAAAACCAGTACTGTATTTCAa
agttttggctgaaaaaaaatatatattctttTGCCATTTTTACTGAGAAA
ATTGAAGGTCGCAATGAAGCTGCCTCTCATCATAAATCTGTATAAATGCG
AACTCAAAACGGAAGTTTGATTTGCAAGAAATACAGAGGGATTCGATTCG
TAGAAACAGTGTTGTAATTTTTCCAGTTGAAACGTTGAATTTTCGAACAT
AGATTTCGAATGCTGCAAACTCGAAATTCTAgaggaaggggggttatgcT
CTATGGATAATACTCTGGCGGCGAcagctttttcaaaacattttaaaaac
aatatattTTGGCGTTATTTTCTTTCACTTGACTTGACGTCATCTTGCTT
CAAATACGTATAAAAAACGGTGGCACTGAATCGTGGGGGACTTGTATATT
ATGACGCAAGGATCTCTTTTTATAGCTTTATTTGTAactcaaatttcatg
tttctgtTTGCGTGCGTGCTTGTAAGCCAAATGGGACCCCGGGCCCACAA
TTATATTCACAGTATATTGGTTGCTATGGTAACAAAGTAGCCCTATGCCG
TAAAGGAAATCTGAAACACAAAAGAAACTGTTTACGTTTTATAAGAGATA
ATAGCTTGTCCAATATACTGCTTTATCTTATTAATGGGGCACGGGACTTC
TAATTACCCCGTTGCACAAAACTTGTTTCATTAAAGTGCACAAATAGAAT
AATTAACGCGaattacacgtttcttttttataagaacataacgcttcgac
ggccaaaatgttaagaacaagttaagaacattttaaggctttgtggactc
gaaacactcgatttcttaggaaaatgggtaaaaatggtcaaaaattggct
aaaataagaacatgttaagaacattttaaggctcgaAACCTAAAAAGTTA
ATAACATCCAAAAGCTTCaacatttttggatgttcttctaaaaaaacgtg
tacacataagaaatatttttcacaatATTTTTCTTCCTTGTTGAGTTTTG
ATTCATAATATCTGTGACAACTTACCCAGTACGAacgtgaaaagtttttt
tcgaattGCGCTAAAAGATGAAAAGAATACGGTATTTTTCTCGGAACAAG
AAAAGTGTGCCATTATGGAAGGTTAGTCTCAAAGGACAtaaattttggac
aattttagcCTCTCAGTGTCGAGGAAGAGAGAGCTTTAAATCTTGTGTTC
AGGGCCTAAAGAAGGTCACTGTAGTGTTTTGCTGTTTGACGGGTTGAGGA
GGAGATCTAAATTGGAAAATCACTCAAAATATGTTTATCACAGAATTAAA
GACTGCATAAATTACCGGCTCAGAGGTAGCCCGGGTGTACTTGCTTAATG
ATCATTGActatagaaaatgaatttcgggtctttcatttttctttttctt
ttttttttcagaacatGATCTCATCGGAATGTTCGTCTCATTTCATTGCT
GCATACCACGATCTACAACAAAGTAGTTGGGAGCCCAGCATCAACGATCA
ACAAGCCAGCAAAGATGGTGATGGTGCTATACGAAAACAAAGCAAAGATG
AGGTCATCAACGGTGCAGTAATGATTAAAAACATCGAGAATATACCAGTC
ATTATCGGCGATTTAAAAACAACCAATCAGAATCCACAACGTGAAGAGAG
CACCGATGACGTATTTGACAGTGACGAAGATACTTCTAGTCGTAAAGACC
AGCCTTTAGCTTCTTGCGATGTTCCTTCGTTTTGGAAGAAAGACATGCGA
GATCGTCGAACGTCAATCAATGCCGATTTCCTATCCCCCATACGTATGGA
TCGATTAGATCGCTCACACAGGCGAGCGTCTTTGAACCCTGAAGGCTTTC
AGGGATTGCGAGTGTTATCAGCTCAATTACAAGATCAACGCTCAAATGCG
TCTAGTCGTAGTGAGAACTCAGTGATGGGATTTGATAGCGAGTACGGTGG
CAGCCAATCAAATGACAGCAGTGACAATGAAAGCGAACCGGAAGACAAAA
TCGATTTCCAAAACATTACACCACAATCGAACGCTCTGTTGCAACGTCGG
CGCCGGTTAAGTGGCGTCGACCCACCACCGGATCCTAAAATGCTAACCGC
CCATCAATCAAAGGTAGGAGCCCTGAAACCGCCCCTAACGAATCGACGAA
TGAGCGTAGATACCTATATGGGAATGAATGAAAAAACTGACAACAGTAGA
CCATCGCGTCGATTTTCAGTGATGACTAAAAAGACGAATTTACCGAAAAT
CGAAACTGGTGGATATTTAGTGAACCAAAACACTTTGAAAACTGGCTCCG
TTAGGCCAGTACCTGAACGGCGTAGTAGCGTCTCCCCTTCGAATTTTAAC
CATGATGCCCCAGTTAGAGACGTGCGTTTGAATAGACCAATAGACGGGCA
ACTTGTGCGCCGTGCTTCTAGAGTAATATCAAAGGTTGAACAAGACTTGA
TTGagaaagaattaaaatttctGGGAATTACTAAAGACAAGAAAGACCCT
TTGGCTGATATTCGAAAATGCCGTTATCTAAGAATTAACCATGACCCTAA
CAATGATGATAAATGCCCGTGTAATAAATGTGAAAAAGAAAGCGGCACCT
TTTCGCCGAGATCTCGGTCACATTCCGGTTCCACTTGCTGA Coding sequence (CDS) from alignment at sc0000019_pilon:933046..936386+ >XLOC_038980 ID=XLOC_038980|Name=XLOC_038980|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2742bp|location=Sequence derived from alignment at sc0000019_pilon:933046..936386+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTGGTGTTAAAATGAGGATGAGAACACTTATTTCGAGTAAGCCAAA
TTTCGCGAAAACATGGAAAAAGCCAGCAAGTATAATCGAAGAAACGGTTG
ATTGTAACAATGTAGTTATGCAACCTAAAGTTGCGTTTGTGTTTTTTGGT
GTTAAAATGAGGATGAGAACACTTATTTCGAGTAAGCCAAATTTCGCGAA
AACATGGAAAAAGCCAGCAAGTATAATCGAAGAAACGGTTGATTGTAACA
ATGTAGTTATGCAACCTAAAGTTGCGTTTGTGaacatGATCTCATCGGAA
TGTTCGTCTCATTTCATTGCTGCATACCACGATCTACAACAAAGTAGTTG
GGAGCCCAGCATCAACGATCAACAAGCCAGCAAAGATGGTGATGGTGCTA
TACGAAAACAAAGCAAAGATGAGGTCATCAACGGTGCAGTAATGATTAAA
AACATCGAGAATATACCAGTCATTATCGGCGATTTAAAAACAACCAATCA
GAATCCACAACGTGAAGAGAGCACCGATGACGTATTTGACAGTGACGAAG
ATACTTCTAGTCGTAAAGACCAGCCTTTAGCTTCTTGCGATGTTCCTTCG
TTTTGGAAGAAAGACATGCGAGATCGTCGAACGTCAATCAATGCCGATTT
CCTATCCCCCATACGTATGGATCGATTAGATCGCTCACACAGGCGAGCGT
CTTTGAACCCTGAAGGCTTTCAGGGATTGCGAGTGTTATCAGCTCAATTA
CAAGATCAACGCTCAAATGCGTCTAGTCGTAGTGAGAACTCAGTGATGGG
ATTTGATAGCGAGTACGGTGGCAGCCAATCAAATGACAGCAGTGACAATG
AAAGCGAACCGGAAGACAAAATCGATTTCCAAAACATTACACCACAATCG
AACGCTCTGTTGCAACGTCGGCGCCGGTTAAGTGGCGTCGACCCACCACC
GGATCCTAAAATGCTAACCGCCCATCAATCAAAGGTAGGAGCCCTGAAAC
CGCCCCTAACGAATCGACGAATGAGCGTAGATACCTATATGGGAATGAAT
GAAAAAACTGACAACAGTAGACCATCGCGTCGATTTTCAGTGATGACTAA
AAAGACGAATTTACCGAAAATCGAAACTGGTGGATATTTAGTGAACCAAA
ACACTTTGAAAACTGGCTCCGTTAGGCCAGTACCTGAACGGCGTAGTAGC
GTCTCCCCTTCGAATTTTAACCATGATGCCCCAGTTAGAGACGTGCGTTT
GAATAGACCAATAGACGGGCAACTTGTGCGCCGTGCTTCTAGAGTAATAT
CAAAGGTTGAACAAGACTTGATTGagaaagaattaaaatttctGGGAATT
ACTAAAGACAAGAAAGACCCTTTGGCTGATATTCGAAAATGCCGTTATCT
AAGAATTAACCATGACCCTAACAATGATGATAAATGCCCGTGTAATAAAT
GTGAAAAAGAAAGCGGCACCTTTTCGCCGAGATCTCGGTCACATTCCGGT
TCCACTTGCTGAaacatGATCTCATCGGAATGTTCGTCTCATTTCATTGC
TGCATACCACGATCTACAACAAAGTAGTTGGGAGCCCAGCATCAACGATC
AACAAGCCAGCAAAGATGGTGATGGTGCTATACGAAAACAAAGCAAAGAT
GAGGTCATCAACGGTGCAGTAATGATTAAAAACATCGAGAATATACCAGT
CATTATCGGCGATTTAAAAACAACCAATCAGAATCCACAACGTGAAGAGA
GCACCGATGACGTATTTGACAGTGACGAAGATACTTCTAGTCGTAAAGAC
CAGCCTTTAGCTTCTTGCGATGTTCCTTCGTTTTGGAAGAAAGACATGCG
AGATCGTCGAACGTCAATCAATGCCGATTTCCTATCCCCCATACGTATGG
ATCGATTAGATCGCTCACACAGGCGAGCGTCTTTGAACCCTGAAGGCTTT
CAGGGATTGCGAGTGTTATCAGCTCAATTACAAGATCAACGCTCAAATGC
GTCTAGTCGTAGTGAGAACTCAGTGATGGGATTTGATAGCGAGTACGGTG
GCAGCCAATCAAATGACAGCAGTGACAATGAAAGCGAACCGGAAGACAAA
ATCGATTTCCAAAACATTACACCACAATCGAACGCTCTGTTGCAACGTCG
GCGCCGGTTAAGTGGCGTCGACCCACCACCGGATCCTAAAATGCTAACCG
CCCATCAATCAAAGGTAGGAGCCCTGAAACCGCCCCTAACGAATCGACGA
ATGAGCGTAGATACCTATATGGGAATGAATGAAAAAACTGACAACAGTAG
ACCATCGCGTCGATTTTCAGTGATGACTAAAAAGACGAATTTACCGAAAA
TCGAAACTGGTGGATATTTAGTGAACCAAAACACTTTGAAAACTGGCTCC
GTTAGGCCAGTACCTGAACGGCGTAGTAGCGTCTCCCCTTCGAATTTTAA
CCATGATGCCCCAGTTAGAGACGTGCGTTTGAATAGACCAATAGACGGGC
AACTTGTGCGCCGTGCTTCTAGAGTAATATCAAAGGTTGAACAAGACTTG
ATTGagaaagaattaaaatttctGGGAATTACTAAAGACAAGAAAGACCC
TTTGGCTGATATTCGAAAATGCCGTTATCTAAGAATTAACCATGACCCTA
ACAATGATGATAAATGCCCGTGTAATAAATGTGAAAAAGAAAGCGGCACC
TTTTCGCCGAGATCTCGGTCACATTCCGGTTCCACTTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:933046..936386 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 142-1371:2112 |
| Aaloc | 1-141:1 |
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