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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:209479..217350+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038903 ID=XLOC_038903|Name=XLOC_038903|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7872bp|location=Sequence derived from alignment at sc0000323_pilon:209479..217350+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcagaagaaccaaaagaaattccatcttCAACATCTAATGAACAAGC
AACGACAGAATCAACAGTTCCACCACTCAAAGGGGTTCAAGTCGAGATTA
ATaaaaaggtacacgaagaacaaaatgaaaaggcaaacgaggaaaaaagt
gaaaaggcaaacgaggaaaaaagtgaaaaggcgaacgaggaaaaaagtga
aaaggcaaacgaggaacaaaaaaaagAGCAAGTGACCGAAGGTAATTATC
TAATCTATGCGTATcctttaaatattttgactaCGtttttttAAGGCCTT
AAACATTGCCATGGAAGACTCAGTGAGCTATCCAATACTCGCGACTTATA
CCATGTTCACATGCTGCGGTTCCGTTtagctccgaaacgaaatgaagcca
ttcatTATATTGGTTTTAAATAGAATTTCTACGTCCCTTCTAATCAATAG
AATGGCTTCTTTTCGTTTCGGAGCGGAACGGAACCGTTATGTGCGGACAT
GGTCTTGGCAAAATTATTAAACTCAGCTGATTTTTCTACTTATTacatca
cttgcaaccaatcgcTTAGCTTCTATACACCTTCCTACAGGAGGGGGTGT
TTAAAGTTTGAATTTACTAAAGGGAGGTGGCCAGTAAGGGGGTCTTCCTA
CCTGGGgccttgacccctctagaaactatgcaATCAGCTGTTTTGGAAAT
TATGTATGTCATAAGAAATCGCAGTGGTGCACATCATAAACTGACATAAA
TAGTACATTTTGGAAAGTTGTGTATTAGCATTACTTCATTTTTCTTGTCG
CATTTATCATGAATTTTTAACCAAACCTCAAGCAAGCTACTTTATAACCG
AACTAAATTTCacccaaaacaaacaaaaacaaacagcaaaactaaaaaaT
ACGCAGATCCAGACGGGAAATATTTACAGTGTTGAGCTAAACAAGGGGTC
TTGCTAATCACCCATTAGATTTTCTTGCAATTTCTAAGAATTGGTGCTGA
TGCAGAATCGGTCTATTAACATAATCCTTAGTCTAGCAGGCTAGACGTCT
AATTCAGACATAGCAGAAATAAAGCAACAAGTtatggagggaacaaattt
tagtttatacaaactaaatcccgtaacaataatcgtattataaacgactc
cagtctacataATCTTGCAATTTTCAATCCTGATTACAGAGGAAAAGATG
GAGGTTGAAGAGAGTGGGGAACAGGAGAAGGAACAACTTCTTGAAGAGGA
AGAATTGTTGATGGAGGAATCAGGAGAGACCACCGACACTTCATCTGAAA
AAGCCAATGAGAGTAGAGACTACTTTGATGAGGACGAAATGTTCCAATGT
CTGGAGTGCAAAATTAAAGAATGTGCTATGTGGAGAAAATCGAAAGATAA
ACAAGGTAAGCtattttcatgttatttttATTAAGTTTTTCTGGGAAAGC
ATATTAATAGGTAGGGAGGAGAATCTCTTTGACGGTTAACACCTATACTG
TTCATATCGGATAAAAAAGCAGAATCTCTGACGGTTAGTATCACGGTCTC
CTCCATTGAATTTGAAGCCCTGAAATGGCTGTGGAGAGtgatcttcaacc
tttctcgaGCAAGAGAAATGGATGGtaaataagtggctttatttcCCATC
TAGGAGCTTTGGATCAATGGTCTCATtacaatttttggacctacctccgg
gtgccccggtggaggttctataaattaacccatgtccgttcgtccgttcg
tctgttaccagcttttctcaggattggctcattagtttcttctgattttt
ggtacaatgatgcaaaatggcaatgcccaaaatgtgacggagcccgattt
tcgaaaaaaaatcatttccggccgaaaatgccggaaatatgccggaaaaa
ccggttttttgtcattttctcaagatttcatcattagttttttctgattt
tttgcacaaagatgcgtattagcaatgcccaaaacttggccgagtccgat
ttttgaggaaaaatcttttccggtcgaaaatgccggaaatatgccggaaa
tcgccgtttttgcagattttcatcggactttttccttatatttcgttgtt
ttttcacataaaaacatttttaatagcaatgtctacgatcaagcatgatt
caattgtcaataaaactgatttttgaagccggaactttctaaaaatcgcc
ggaacagccgattttcgccggaaaaacggtatttcttgaatttcttgagc
tgtactttatatttttcatgaaattttgcacactgatgcaaaatgtcaat
acctaaattgtgacgtagcccgattttcgaaaaaaatacatttccggccg
aaaatgccggaaatttgCCGGAAAAACtcgttttttggcattttctcgag
attttatgattagttttttctgattgtttgctcaaagatgcttattaaca
atgcccaaaacatggctgagtctgatttttgagaaaaaattttttccggc
agaaaatgtctgaaatatgccggaaatcgccgtttttctagattttcatt
ggactttttccttataattggttgttttttcattcaaaaacattattaat
agtaatgcccaccatcaagcatgttttaattttcaataaaattgattttt
gaagccggaactattttaaaagtcgccggaacaacctattttcgccggaa
agacagtatttcttgaatttctcgagctgtactttatgtttttttatgaa
attttgcacactgacgcaatatgacaatacctaaaatgtgacggagcccg
attttcgaaaaacattttttctggccgaaaatgccggaaatatgccggaa
aaaccggtttttgacattttctcgaatttttatttttagttttttcagat
tttttgcagaaagatgcgtattcgcaatgctcaaaacatggccgagtttg
atttttgagaaaaattttttcccggttgaaaattccggaaatcgctgttt
ttgcagattttcattggattttttccttatatttctatgtttttcacaaa
aaaacattattgataacgaTGCTctccatcaagcatgattcaattgcgac
cagaactttctatttattttttccctacaacccttccctctccccccacc
atcaatcaatgatgaatttcttgcgttatgcattttcgctaaacgctatg
ttttctgactgatttttttcatttttctccttgcattgctatctaacttt
catcatcaggtaggtccattcagcatctagcttgttctgattttttgcac
aatgatgcaaaatggcaatgcccagaacgtgacggagctcgatttttgag
aaaaaatttatttgggcaaatttgggccaaaaactacctaaaaatatggt
tttttggactttgtgcaaaatcctgtcattacttttttctgattttttgt
acaaagatggaaggcaagattctctaaagaatgccatggctgaagtggtt
tttttccggaaaattcttattcgccttaaaaaactgattttcgtattttg
ggggaaattccctttaaccaaataagaaaatatagtttttaacaatgttg
actcattgtttttttctgattttttgcacaatgatgcaaaatggcaatgc
ctaaaatgtgtcggagccagattttcgaaataaaatatatttgggcaaat
ttgggccaaaaactgcctaaaatagggttttttggactttgtgcaaaatc
ctgtcattacttttttcagattttttgtacaaagatggagggcaagattt
tctaaagaaagactgaagtggtttttcccgggaaattcttattcgcctta
aaagacggattttcgtattttggggaaattccctttaaccaaataagaaa
atatagcttttctcaatgttgactcataatttttttatgatttttggcac
agtgatgcaaaatggcaatgcccaaaatgtgacggagccagatttttaag
gaaaattattttgggcaaatttgggccaaaaacagcttaaaaggtttttt
gggcctgaatggtttaagtgattttcgtatttggggaaattcctttttac
catttaaCATTATTCAACAAACAAGCTTtgtttttccattctgaattttt
gtacaattattgtcactttttccttattttcatctgatgttaaacattag
gtaggtccattcagcatgttgcttgtttcttaATGACTGAAGGTTTTAAA
TACTGATTCGAGTGATATTGAAAGCTGTTATGTGTCCAGAGGTATCAATT
GATTTGCTTACATTTACCTGTAAGATAAAGCTTGTCCATCTTTTCCAGGT
GTGATTTGTAATCTTTGTCACTTGGAGCGTATCAAGGGCGACTCGGCCAC
TAACGCCCCTGGCCAGGGTGGAACAAATAGCAATAACAATGCAGCGTCTT
CTTCAACCAACAAAACGTCATCTTCACAGATGCAACCACCCATGAAAGCC
AAAGATGTTCGAATctccaaaagaaaaaataaacaaaataaggTTGACTT
CTTCTTCCCTTTTACCTCCTGTGTGATGgttaaaattcattttgcaaGCT
CTTTACAGATCTTCAAAATACCTTTTGTTTTATCTCATCCGACTGCTTTG
AATTGATAGGTATGAAAAATCAAGGTCTattcattcaatttttggaagtg
agaatagaccttttcataaattacgtcacgagcaacgcttacctcgtttt
caaaatattgctatagTAATagactactttaggcgtacaaactttcgcga
gcagaagctttcgcgaggacgaaaaatcgaaattcacgacatttactttc
gcgaattgaatggaaaaatatatttcgcgagcataaactttcgcgaatca
agacgtagaattgagaattttcacatgaaaaaatggcttagagggacaaa
tacttcttggatttgcttgaaacatttgtcctttgacttattagtcttat
agcaggctaaaaaatgccataaaagttacactttattcaaagtttgaaga
tttacaaattatctattttgtcaagaatttttcgcgagcataaactttcg
cgaatggtccttcctagaatttttaaatacatttactttcgcgaaaaggg
ccaaaattcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgtacgc
ctaaagtagacggtttccgtcgtcgcaaacgccggttaacggttttgctt
gcacatcaaaagcctttaaagtactataatgtgggttaattcctgacatc
gttttggcttaaaatgccgaatacaataataaaaattatacttctaaact
ttctaatAGATTAGTAATagattcccagaggagttcataagaagttcact
ctatttataaaagtacTACTTGAAGAAGaagggatttaatcaccttggta
atggtttcaaaacgagacaGTCGTTgctctcaaaataatttatgaaaagg
cctattacACTGATTTCTTTCCCTTAGAAATTTACAAACGGTTTTTACGG
CGATCGTATTATAAAGAGTGGTCACTCCAAAAGTCGTCGTTCATTGTACA
AAAGAAAGCCCATGAAATCCGTGCTCGGTTCGTCCGCCATCGTGGCTTCA
CAGTCTATCTATCATGACGTAAGTATAGCAGATTGCTTTTGTTTTTACGG
AAGTGCGTATAATCATTATCATGTCTAAAGACACGCCGATACATATTTTC
TGCTGAAGAACTGCATTGaatagagtcgatatttaaaatgtggatagccc
agtaatctaggacttttaggcagtctttcgattgctttcacggggtccac
ggccagccggctcggctatatTTGAACTGAACGGAACGTTGAAAGAAGCG
GGGATTCTAACCTGATAAGAACCTGAATTGAATCTGATTTTATAATCTGA
TCTTTTTCAGGGTCTGTTATACCGAGTAGGGGATATTGTTTGCACGTCAG
ACATCGAAGGGGGGACCTACTATGCACAATTGAGAGGTTTCTTACAAGAC
GAATACTGCGAAAAATCCGCAGTCATCACTTGGTTAATTCCCACCAAACG
AAATGTCACCAAATTCGACCCGATGCTTTTCGTGCCAGGTATTTAAATTC
TTTATCTCTCCACTACAGTCTAAACGTTTAGTTTTCAATACGTTTTTTAA
ACAAACTGGTTTCCTTTCCTCGATCTTTGTTCGTTTTCACGACAAACTGT
GGTTATTTTAGTCTTCCCTGTTTTAAACTTCTAAATCGCTTGAAGTTGGG
ATTTTCTTAGACAGGCTGAGCTTTTCTtagtttgttgttttattttaatg
atttttaaccTCGTTTCTCCCATAAAATTCAGGAAGAGGTCGGGACCTGT
TGTGCTCTTCTGACAActaatttttaaaggtttgattGCGCCCAATAAGT
TGAATCATTTATTTGACCTACAAAAGTTGAGTTGATATTTCAATGAATAA
ATTCCTTACTTTCTTTAAAATAGAAATGACATTGATTCGACATTTTGGAT
GTGAAACCCTCTCACGGTTCTTTCATAAAAAGTGACACTTTTCTCTTGGA
ACATTTCAAAGTTTTCTTCTCTTCGTATGATTTCGAAAGAAGTTGACGGA
CATATTGACATTAAAGAGTCCCAAGAAAGAAACTTTCAAACTTCCCTTAG
ACCTGTCTCATTTTAAAGATTATGTttgatatttctaaattttcaagtga
atgaaatcaaaagattttcttgGACATGGCCTCTTGCTTTGTAATTTTCT
CGATTGTTCAAAATGCTTTGCCTACTTGGCAATCATTTTAAGTTCCTTCT
TTCGATGGACAAAGTATTATTTACTTCAGAGACGTGATGTAAAACTTACG
AAAGTACGACCTCTCAAACCATCATAAtcttaaagtttgaaaagaaattg
tCGCACCCACTATAATCGAATTAGCCGATCTTTTTCGAGAGGGCATGAAT
AAAATCTTTCAAGTCACACATATAGGAAGAGAGACAAAAAATAAGTTCAA
AGGTGACATTAAATGATTAACTCTTTTTGATGTTTCAAAATCTCATCTTT
TCTTCGTAACAAAACTAGATTGTTTATCATGCGATACTTTCACCGCCTTT
TATCTTTTCGTGACTTTGCTTCATCACACCCTTTTTAAAGGAGGTTTCCC
CAAACTTCTttgaaaaacaccaaatttcacCTGTACAAAAGAACTTCTTC
CTCCATCTGATGTTTATGACGTGTCGACAACCGAACGTCTGTTTTTCAGA
TTTCTAGAATATTGTGCTTCAATACCTCATCGGCCCTCGATACTGCATTT
CCAGTGTCGAGTGCAATCATTTTGCAATCAAACTTCGTAGAATTACTAGC
TTCAGCTCAGAGGAATTTCTATTTACTTCAAATTACATTGATGGCCTTAG
CTTGCCCCCTTCTCAATGAGTCtcaaaaacctttaaagttaTTCTTTTCT
GTGATATGGAAAGGAGGCGCGCctcttatgctgacaaagcatcaGTAACA
AACGAATTTTTCACAATTTGAAGATGTTATGTCGAGAAATGGTAAGAGAT
ACATCAAACAATGTTCTTTAAAGATAAAATGCATTTTATTTGATCGGTCC
TTCTTTTCTCTCCTAATTTTAGGGTTAGACGAAGAGACGCCACGCCCAAT
GTCATGTTTTAGTTTCGTTTGTCGCGCATCCACCAACCTTTTTAAAGCTC
CGAACATGCATCCACCTTATCACCGCTCACAATGTGACCTCAACGACCTC
ATACATGTCGCCAACGCCATGAATACTGAATCAACTGAAGATCACCAGCT
GACAACAGAAGGGGAAAGCTGA Coding sequence (CDS) from alignment at sc0000323_pilon:209479..217350+ >XLOC_038903 ID=XLOC_038903|Name=XLOC_038903|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2292bp|location=Sequence derived from alignment at sc0000323_pilon:209479..217350+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcagaagaaccaaaagaaattccatcttCAACATCTAATGAACAAGC
AACGACAGAATCAACAGTTCCACCACTCAAAGGGGTTCAAGTCGAGATTA
ATaaaaaggtacacgaagaacaaaatgaaaaggcaaacgaggaaaaaagt
gaaaaggcaaacgaggaaaaaagtgaaaaggcgaacgaggaaaaaagtga
aaaggcaaacgaggaacatggcagaagaaccaaaagaaattccatcttCA
ACATCTAATGAACAAGCAACGACAGAATCAACAGTTCCACCACTCAAAGG
GGTTCAAGTCGAGATTAATaaaaaggtacacgaagaacaaaatgaaaagg
caaacgaggaaaaaagtgaaaaggcaaacgaggaaaaaagtgaaaaggcg
aacgaggaaaaaagtgaaaaggcaaacgaggaacAGGAAAAGATGGAGGT
TGAAGAGAGTGGGGAACAGGAGAAGGAACAACTTCTTGAAGAGGAAGAAT
TGTTGATGGAGGAATCAGGAGAGACCACCGACACTTCATCTGAAAAAGCC
AATGAGAGTAGAGACTACTTTGATGAGGACGAAATGTTCCAATGTCTGGA
GTGCAAAATTAAAGAATGTGCTATGTGGAGAAAATCGAAAGATAAACAAG
AGGAAAAGATGGAGGTTGAAGAGAGTGGGGAACAGGAGAAGGAACAACTT
CTTGAAGAGGAAGAATTGTTGATGGAGGAATCAGGAGAGACCACCGACAC
TTCATCTGAAAAAGCCAATGAGAGTAGAGACTACTTTGATGAGGACGAAA
TGTTCCAATGTCTGGAGTGCAAAATTAAAGAATGTGCTATGTGGAGAAAA
TCGAAAGATAAACAAGGTGTGATTTGTAATCTTTGTCACTTGGAGCGTAT
CAAGGGCGACTCGGCCACTAACGCCCCTGGCCAGGGTGGAACAAATAGCA
ATAACAATGCAGCGTCTTCTTCAACCAACAAAACGTCATCTTCACAGATG
CAACCACCCATGAAAGCCAAAGATGTTCGAATctccaaaagaaaaaataa
acaaaataagGTGTGATTTGTAATCTTTGTCACTTGGAGCGTATCAAGGG
CGACTCGGCCACTAACGCCCCTGGCCAGGGTGGAACAAATAGCAATAACA
ATGCAGCGTCTTCTTCAACCAACAAAACGTCATCTTCACAGATGCAACCA
CCCATGAAAGCCAAAGATGTTCGAATctccaaaagaaaaaataaacaaaa
taagAAATTTACAAACGGTTTTTACGGCGATCGTATTATAAAGAGTGGTC
ACTCCAAAAGTCGTCGTTCATTGTACAAAAGAAAGCCCATGAAATCCGTG
CTCGGTTCGTCCGCCATCGTGGCTTCACAGTCTATCTATCATGACAAATT
TACAAACGGTTTTTACGGCGATCGTATTATAAAGAGTGGTCACTCCAAAA
GTCGTCGTTCATTGTACAAAAGAAAGCCCATGAAATCCGTGCTCGGTTCG
TCCGCCATCGTGGCTTCACAGTCTATCTATCATGACGGTCTGTTATACCG
AGTAGGGGATATTGTTTGCACGTCAGACATCGAAGGGGGGACCTACTATG
CACAATTGAGAGGTTTCTTACAAGACGAATACTGCGAAAAATCCGCAGTC
ATCACTTGGTTAATTCCCACCAAACGAAATGTCACCAAATTCGACCCGAT
GCTTTTCGTGCCAGGGTCTGTTATACCGAGTAGGGGATATTGTTTGCACG
TCAGACATCGAAGGGGGGACCTACTATGCACAATTGAGAGGTTTCTTACA
AGACGAATACTGCGAAAAATCCGCAGTCATCACTTGGTTAATTCCCACCA
AACGAAATGTCACCAAATTCGACCCGATGCTTTTCGTGCCAGGGTTAGAC
GAAGAGACGCCACGCCCAATGTCATGTTTTAGTTTCGTTTGTCGCGCATC
CACCAACCTTTTTAAAGCTCCGAACATGCATCCACCTTATCACCGCTCAC
AATGTGACCTCAACGACCTCATACATGTCGCCAACGCCATGAATACTGAA
TCAACTGAAGATCACCAGCTGACAACAGAAGGGGAAAGCTGAGGTTAGAC
GAAGAGACGCCACGCCCAATGTCATGTTTTAGTTTCGTTTGTCGCGCATC
CACCAACCTTTTTAAAGCTCCGAACATGCATCCACCTTATCACCGCTCAC
AATGTGACCTCAACGACCTCATACATGTCGCCAACGCCATGAATACTGAA
TCAACTGAAGATCACCAGCTGACAACAGAAGGGGAAAGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:209479..217350 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 949-1146:7675 |
| Aaloc | 769-945:5961 |
| Aaloc | 628-768:5528 |
| Aaloc | 436-627:4351 |
| Aaloc | 220-432:1192 |
| Aaloc | 1-216:1 |
|
