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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:289713..296025+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038900 ID=XLOC_038900|Name=XLOC_038900|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6313bp|location=Sequence derived from alignment at sc0000323_pilon:289713..296025+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacGAGGTATTTGGTTTTTGCCATCATCATGGTTACCTTGACTTGCGC
AGAAGCTTACTCCTTCTTTAGAAGTGACGGAGGTAAGATTTTTGATTCCT
TTTATCATCCATTTCGCATTCAATAACTTGAAATAGGATTCTGATTGTTT
TCTGTCAACTATGCTAAAGCTCTAGAGGAGTTGTTGTCTTGTTGTCATCT
CTGATGGATCTATGCATATGAAAAAATGATACTcgacttattttgaaaat
tatttctgtCAAATTCTCTATTAAgtctaaaaatccaaatatttccttta
gtATGTGCTGATCGCAACCCGTTAGAATGTCAAGCAGCTAAAGCAAATGG
CAGAAGATGTGGAAGCGGTTACTATTATTGGAATGTCTGTCCAGCAACTT
GTGGAGCTTGTGACAAGAAAGATTCACTCAGAAAGAGAGATGATGTCTGT
GCTGATACCAACCCAGCAAAATGTCAAACAGATAAAGCAAATGGCAGAAG
ATGTGGAACCGGTTACTACTATTGGAATGTCTGTCCAGCAACTTGTGGAG
CTTGTGACAAGAAAGATTCACTCAGAAAGAGAGATTATATCTGTGCTGAT
GTCAACCCATTAGAATGTCAAGCAGATAAAGCAAATGGCAGAAGATGTGG
AAGCGGTTACTACTATTGGAATGTCTGTCCAGCAACTTGTGGAGCTTGTG
ACAAGAAAGATTCACTCAGAAAGAGAGATTATGTCTGTGCTGATGTCAAC
CCATTAGAATGTCAAGCAGATAAAGCAAATGGCAGAAGATGTGGAAGCGG
TTACTACTATTGGAATGTCTGTCCAGCAACTTGTGGAGCTTGTGACAAGA
AAGATTCACTAAGAAAGAGAGATGATGTCTGTGCTGATGCCAACCCAGCA
AAATGTCAAACAGATAAAGCAAATGGCAGAAGATGTGGAAGCGGTTACTA
CTATTGGAATGTCTGTCCAGCAACTTGTGGAGCTTGTGACAAGAAAGATT
CACTAAGAAAGAGAGATGATGTCTGTGCTGATGCCAACCCAGCAAAATGT
CAAACAGATAAAGCAAATGGCAGAAGATGTGGAAGCGGTTACTACTATTG
GAATGTCTGTCCAGCAACTTGTGGAGCTTGTGACAAGAAAGATTCACTAA
GAAAGAGAGATGATGTCTGTGCTGATGCCAACCCAGCAAAATGTCAAACA
GATAAAGCAAATGGCAGAAGATGTGGAAGCGGTTACTACTATTGGAATGT
CTGTCCAGCAACTTGTGGAGCTTGTGACAAGAAAGATTCACTAAGAAAGA
GAGATGATGTCTGTGCTGATGCCAACCCAGCAAAATGTCAAACAGATAAA
GCAAATGGCAGAAGATGTGGAAGCGGTTACTATTATTGGAATGTCTGTCC
AGCAACTTGTGGAGCTTGCGACAAGAAAGATTCACTAAGAAAGAGAGATG
ATGTCTGTGCTGATGCCAACCCAGCAAAATGTCAAACAGATAAAGCAAAT
GGCAGAAGATGTGGAAGCGGTTACTACTATTGGAATGTCTGTCCAGCAAC
TTGTGGAGCTTGTGACAAGAAAGATTCACTCAGAAAGAGAGATGATGTCT
GTGCTGATGCCAACCCAGCAAAATGTCAAACAGATAAAGCAAATGGCAGA
AGATGTGGAAGCGGTTACTACTATTGGAATGTCTGTCCAGCAACTTGTGG
AGCTTGCggtaatttttctctttttttctctctctagACTTGATTGAAAG
TGAATTTAAGATAATCAGAACCAAACTACTTCGAGATCAAACTTTTTTAG
AGGAACTTATTATATTTAGAATTATAATATATGGCTTTAAAGAGGGGTTT
TAATTTTACGGTGTGGCGAGATTGTctcttttttagtacggtattacgga
atttgacgaaaaaatagacgggaaaacggtatttgaAAATCAGACGgtat
ttagccttattttttgtcagtattccagtattgtttttttttcttcaatt
tttcgggattccgggattcagcaaaaaacttgacgggaaaacggttttcg
aacccctacaaaccccctttttttaaaagggtataatatataataaactt
ttgtttttttatagcaGATAAGAAGAAAGATTCGATATTGAGACACGACT
ATGGTAAGCGTTTTCAAAACTGAAATTGCCATATTATAAAACTTTTAATA
GGAACAAGTTAATTTGGATCagcctgttcttattttttattttaaagtaa
cttttcttTAAGCTTAAATCAATATTTTCGTTGTTATTTCGTAGATCCTG
tctttaaaaaacaataaaaaacacctaaaaaGCTGCTTTTTTCCAACAAA
TTCAACTACTACAACCAACTCGTTGACCAAATGGCATCGGCTGCATCATC
CGTAAGGCCAAAACAATCTGCTGCTTCTAAGAAAATCTTAATGAAAGAAG
ATATCATTATATGCACCGAAAATCGATGTGTTGATGACAGGGATTCAGAT
TCGCTAACCTGTGCAAAATGTAAGAGATCCATTCACTACAGATGTTGTAT
GCTTCCTGCATTCCATATTCAAACGCTCAAAGCCAACAGAACCCAGAAAT
ACATCTGTATCAACTGCGTTGAAGTTGAACCCAAGCTGCTCGAACTGGTC
CCCAAGAAGGAAAAGGCTCAACCATCGCTTCAGACGCAAAATGAAATTAA
ACGCCTTCGCAGAGAAATCGACGCATGCGAAGGAATTATAAAAAGTAGTC
GTGACTTTGAAGATCACCTTAAGAAACAGCTTGAAGATAAGGACGCAGAT
ctccaactttgaaaaatgatttgaaagctGACCCCGGCCTGCATACACTC
GAGTTTGCTGaaaagaaattcgaacgaaagcTTGACGAATTCAAGGACAG
TATCCTGTCAACAATAAAGAACGAATGCCAACAAGCGATGAAATCGTATT
CAGAAGCCACAAAATCTGGTCTCCCTCAACAACCGACGAGTGACACGAGC
GGAATCAAACTTGCGATTAAACAAGCCAGAGACGAAGAGATCGCTCTTGA
GATGGAGAAGAGGAGAAGAGCCACGAACATCATCGTTCAcggaagaaaag
aagaagaacaggTATGCGATAAtagtgacaaaaataatcaTACTAGGGAC
TGCGAATGGGCTGATCAATTAATTAAGGATCTGCATGTTTCTTCtaagat
caaaaaaatatttagaataggTAAGAAACCAAATCGTCCACTGTTAATTT
GCCTCGATAGTGAAGATGATAAACTTAAGATCATGGGAAATCTCCCATCA
CTTAAAGGTAACGATACTTATAAAGGCATAAGTATCACAGAAGACCTATG
TAGGTCCCAACGTGAAAAGTATAAAGAGCTATCACAACAGGCGAAAGACC
TAAATGATGACCTAGAAACCGATGAATTTATTTATCGGGTTCGAGGATCG
Tcaaaaaacggcttcgaaataaagaaggtgtacaacaaaacacaaaaacg
aaacaacaacccaatcaatcaataaaaccgatcgataacgataacgaCAG
CTTGAATGaaaacccacctaacaaaaacaattcaaaaaacacaaccacaa
caaTTAGTGAACTTACTATCATCTACACAAATGCAGACCAAATGACAtct
aagaagaaaaatgaacttttaaagCACGTCGCTACCGAACAACCTCATAT
AATTGCGATCACCGAAGTCAACACCAAACGGATCTCTGAGAGAAAAGATC
AAGACTACTCAATTGAGAATTATTCTATACCATATAAAACTAACATAGGA
ATACaaaaaaaGAGAGGAATCATCATTCTAGTCCACAAGTCTATTGATCA
CCTCATTCTACAAATACAAacgaaagttgaatttgaagagaCTTGCCTGT
TAGAAATTGCAATGGAGAACAAAGACACTATGTTACTCGGATGTCTTTAG
AAGCCCGACAAAAACCGAAACAAACATCTTCGatgaaaataataagaaca
tgaaTAAGCTCATAAAAGATCTCTGCCTAAATCCGAAATACACTCATATA
TGTCTTATAGGTGACTTTAACTATAAGAAAATCGATTGGGTCCATTGGTC
CTCACCTTGTGAAGAAGATAGCGACGAGGAGAAATTCCTTCATGCTTTAA
GAGACTGTTTTTTATACCAACATGTCCTTGAACCGACACGGCGACGAGGC
ACCGACAAACCATCAATACTCGATCTCATCCTTACAGgggaagaaaatca
agtttCCGAGATAAAATATCTTGCCCCACTCCATCTCAGTGATCACAGTG
TCATCTCCTTTAAATTCTATGGCTATTTCACAATTAAAAATGAGCTTGAT
AGATATCAATACAGCAAAGCCAACTACCAGTTTATGAGATCTCATCTAAG
CCACATCAATTGGTCTATCGAATTCATCCAAAAGTCGATTGAATTAGATG
TGAATGAGAGTTGGGACCTATTCCTAAAACAAATGATCGAGCTCCGAAAC
CTCTATGTGCCACTTACCCACAATAAGAACAACCTGTCAAATCAAAGGAG
GAAAGGGAAGCATCCCTTAGAtccaaaaatttgtcagataatTAAAGAGA
AACGTAAGGCGCATAGAAAATGGATCATCTCACTTCAAAACGACGACACT
GAAAGACGTAGAAGGGAGTACGTAAGATGGCGCAACGCCGCTAATAGAGC
CCTGACTCGCTCCAAGAGAGAGTTCGaaaaaaaGATCAGcgaacaatcaa
aaacaaatccaaaaagattctggaaatatGTACGCAGCAATCTGAAAGCA
AGAACGGGAATACATCCTCTCCTCGAAAACCCTAATAATgaaaattcgat
caaatatgATGACAAAAGTAAAGCCAACATACTCCAGAGCCAATTCTGTA
GTGTCTTTACACGTGAGCCAGTTGAACAACTCCCTGAATTCCATTCCAGG
ACGGATAAAGAAGTAGAGATAAATATACTAACTGAAACTATAAAAAAGGA
ACTCAAGGCGTTAAATCCAAACAAATCCATGGGGCCAGATGAACTTCATC
CAAGGATGCTAAAGGAGCTCGCTGAATATATTGCAGAACCGCTTTTCcta
ataatgacaaaatctctcAACGAAAGTTGTCTCCCAAACGACTGGAAGCA
TGCTAATGTATCACCTGtttacaaaaaaggaaacaaaaatatagcgGAAA
ACTACCGTCCGATTAGCCTGACATCCATTGTGTGTCGAATGATGGAAAAG
ATTCTTAAAACCCATATTATGTCGCATCTAGAGCAAGAGAAACTACTTTC
TAACAAGCAACATGGTTTTATCAATCGCCGATCAACAGTAACACAACTGC
TAAACTATCTAGATGTATGTACCGAAGACATTGCTAACGGTAAAGCTGTT
GACGCAGTGtactttgactttgcaaagGCATTCGACTCAGTTCCCCACCA
AAGGCTCTTAATCAAATTAGAAGCCTACGGAATAAGAAATAAGCTGCTCT
CACACTCCTGAATTATTCCGTAAACTTTACATAACATTTGTCAGGCCCCA
CCTAGAATATGCCCAAGTCATTTGGTCACCGAAactgaaaaaacacaaaa
aacttatAGAAGGTGTTCAGCGGCGCGCTACAAAAACAGTCGAAACATGT
GGACGACTATGTTATGAAAGCAGACTACAAAGAATTGGAATCCCAAGTCT
AAAATATAGGCGTGCGGTAAGTGAtatggttgagatctttaaacatttaa
atcactatgaaaaatcgtgtgttcctaagaaatttaaccaacgaataaga
ccaatgagAACACATAATTCTGAGCTGGTAAGAATTTTCGGGAACGATGG
TGTCCGTGGACCACAGAGCAACTCCCTTTACTATCGGGGCATTGAACAGT
GGAATAGCCtacctgaaaaagtagttaaatcatctacaatacaagagttt
aaagaaaacctcggtctagcttggaaagagaaaatgtttgagtatgattg
aaactgtcactattgttgcatatctgtttgaagttaacctttgtaataaa
ccaaaccaatgtatgagcgatttatagaggcccatgtgcttgcacggtgg
cctggaaatctgtaaaacattattattattattattattattattattat
tttcctAACCTTCCTCTTGTTAATCTCATCCCTAAAAGCGGACAAAACTC
AGAAGGTGATTTTCAGTGCAAAACGACATAACACAACATATCATTTTATT
CactttttagagttgaaaatgcaATTTCTTGACGAACTGGAACGAAAGAT
GGCAATGGTGTAG Coding sequence (CDS) from alignment at sc0000323_pilon:289713..296025+ >XLOC_038900 ID=XLOC_038900|Name=XLOC_038900|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000323_pilon:289713..296025+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacGAGGTATTTGGTTTTTGCCATCATCATGGTTACCTTGACTTGCGC
AGAAGCTTACTCCTTCTTTAGAAGTGACGGAGatgacGAGGTATTTGGTT
TTTGCCATCATCATGGTTACCTTGACTTGCGCAGAAGCTTACTCCTTCTT
TAGAAGTGACGGAGtATGTGCTGATCGCAACCCGTTAGAATGTCAAGCAG
CTAAAGCAAATGGCAGAAGATGTGGAAGCGGTTACTATTATTGGAATGTC
TGTCCAGCAACTTGTGGAGCTTGTGACAAGAAAGATTCACTCAGAAAGAG
AGATGATGTCTGTGCTGATACCAACCCAGCAAAATGTCAAACAGATAAAG
CAAATGGCAGAAGATGTGGAACCGGTTACTACTATTGGAATGTCTGTCCA
GCAACTTGTGGAGCTTGTGACAAGAAAGATTCACTCAGAAAGAGAGATTA
TATCTGTGCTGATGTCAACCCATTAGAATGTCAAGCAGATAAAGCAAATG
GCAGAAGATGTGGAAGCGGTTACTACTATTGGAATGTCTGTCCAGCAACT
TGTGGAGCTTtATGTGCTGATCGCAACCCGTTAGAATGTCAAGCAGCTAA
AGCAAATGGCAGAAGATGTGGAAGCGGTTACTATTATTGGAATGTCTGTC
CAGCAACTTGTGGAGCTTGTGACAAGAAAGATTCACTCAGAAAGAGAGAT
GATGTCTGTGCTGATACCAACCCAGCAAAATGTCAAACAGATAAAGCAAA
TGGCAGAAGATGTGGAACCGGTTACTACTATTGGAATGTCTGTCCAGCAA
CTTGTGGAGCTTGTGACAAGAAAGATTCACTCAGAAAGAGAGATTATATC
TGTGCTGATGTCAACCCATTAGAATGTCAAGCAGATAAAGCAAATGGCAG
AAGATGTGGAAGCGGTTACTACTATTGGAATGTCTGTCCAGCAACTTGTG
GAGCTTcaGATAAGAAGAAAGATTCGATATTGAGACACGACTATGcaGAT
AAGAAGAAAGATTCGATATTGAGACACGACTATGagttgaaaatgcaATT
TCTTGACGAACTGGAACGAAAGATGGCAATGGTGTAGagttgaaaatgca
ATTTCTTGACGAACTGGAACGAAAGATGGCAATGGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:289713..296025 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-570:6263 |
| Aaloc | 481-516:2117 |
| Aaloc | 85-477:304 |
| Aaloc | 1-81:1 |
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