|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:961864..964299+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038885 ID=XLOC_038885|Name=XLOC_038885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2436bp|location=Sequence derived from alignment at sc0000005_pilon:961864..964299+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCCGAAGAGGTCGAACAGGGTCAAATCCCGAAATCACCTCCTCCTTGAC
CGAAGATGATTTGATCGAACGCTTACGTGCGATGACTATCCCTGAGGTAT
CTGATTTACAACAGAAAAATGACTCGTTTATCTTTGACGATATGTCACAA
AGCGGTGATCAAACAGACGGGACATCGAGTCTCAAAAATGATAAACCAAC
GCGGTTGCTATGCGATCGACCTTCTATACAATCACCAGACTTCGAAGAAC
TGGAAGCTTCAGCGGgaactgttcacaaaaacattCTTCATTTACGGCAA
GATTTAGACAACCTTCGAAAAGTTCATCAAGATTTTTCCAGGTCTTTCAA
AGCAGACATGCAAAAGAAATTACTTGAGTTCAGAAAGAAAGCATCAAGGT
TGGATGAACACCTCCAAAACAAGCTAGACAacaacaataatcactttttc
GGTGAGAAAAGTTATTGGTTTCCAAATCTTTAGTTAGCCTCGTTCACAGA
ACCTGTAACGATCCCTACACCGTGCTTGAGAAGTGTACTTCAAATGAAAT
ATCAATATTGGCTAAAACAATATCTAGAAATCTAAACCTTTAAAGCTTCT
ACATTTTCTCCATCTGGTAAATATCTAATTACTGATCACAAGAGAATTTC
TATGTCTCCAGAATAAGGTAGATTTGATTTGTTAAATGACAAAATAATGG
TGTGGAGAACAAGAGCATAGAATTCTAGACTAGGTTGGAGCAATATTTAC
CAGGTTATTCAAACaacattaaaggttttgtttttaaataagagtgattt
cgtttcttactcgtcaattttaattcacaagctttttcacattgcaTTGA
Catgtatgtggagcaagattgggcagaaagagaaaaagaaaatacacaaa
gatccaaatgtaaattttggagaTTGAAATATAGCATTGCTATCATCATT
ATTATCATTCTTAAAAACATTCTTTACAGCCAAAGAGTTACCAGTTCGAG
AACAGAGATTCAAATTGACTTCAGACCAAACACATTATCGGACCTTGTTG
GCTGATTCAGAAAAACAATTATCGTAAGTTACGTTATTGATGTTGTGGAA
AATGAAATGGGTTATACATCTATCAATCCTTAGCAGCGCGGTCAGCTTTT
AAGGGGTTTGGTAACGAATTTACAAGGAAACGACGTCAAAATTCTTTGTC
CGAAAGGATATCAATGTAACGACTTCAGACATTTTGACATCATCCCTTCC
GAATAAACTTGAACCTAGCCTCCTCACGTTTTAAAGGTTGGTACGTGTAt
cgaaaataaaagaatgaatgaattgattgatttatCGAAGTATTCATTGA
TTGGCAAATTCTTTTCTCATTTTATAGTGAACTAGAAATTCATATCGAGT
TGATTCGACTGAACGTGGTGCAAACAAAACGAATCGAACATCCATCCCAG
ATTGAGGATTTTCGTGATGAGTTAACAGACGTAGTCAAGAATATCAGCAT
TGCCAAAAGTAAGTAAGAACTGAGAATGTATCAGGAAGCGGAAAGTTCAA
CTGAAGCTTTCATGTTTAAACACTTCTTTCTACATATAAAGCTACGcaac
aattttttataattaaatTCGCGGAAAATCAGAGAGCAGCTTTAAGGGAT
GAGGCTTTAACTACAAGGACaatctttcttttcttccttCTAGAGAAATA
TCACGGTTTGGAAGAGACGCTGAAACAGGTCATTCATGCTGAGCTAGAAG
TCATACAAAGAGAGGAACAGTAAGTAATTGACGAAGACCTGCACCaagca
ggtcgaaatattgtttacacgaaaaatatatacagaatgaccattaaaat
gttatttaaattaTAATCTACATTCGTATCAAAGTATGACACTAAAGGCA
GTAAGTAATTGTATTTCAGCAGAAGAAATCTTTAAGATTCTTGTGTCAAA
CATTTCCATTCCAAACCCCTGTTCCTTTCAATATTCCATTCAGTTCATGA
ATGGTTGCCTGGTCCATGAACACAGTGAAAACTAAACTTCTTGTCCAGTC
CAGGATTACTGGGCTATCAACATAAAATATCGACTATATTCGTCTAAATG
TGTAACAAATGCCATGTCCGAAATCCTTCCATTCTTTAGGTTTCGGAAAG
AAGAGCCAAAGAGGATCGAAAATATGATCAAAAGGTGTCGTAAAATATCT
TCCACCGTCGAAACTTTGCAGAAGTAAGTAAATAATAGGTTACAAAAATG
AAATGTGCGAGACATACAAAACCAAGCCTCGTAATCCACACCAAATATTG
AATTCGTTTCAAGTCACCAATAAGATTGAAAAAAGAAGTGGGCTTGACAT
CTATTCTtgctttcaactttttcagattGACACAGATCCAAAATGATGAT
AAACATTTTCGTAAAAGAAAAGATACCTTGGTATAA Coding sequence (CDS) from alignment at sc0000005_pilon:961864..964299+ >XLOC_038885 ID=XLOC_038885|Name=XLOC_038885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000005_pilon:961864..964299+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCCGAAGAGGTCGAACAGGGTCAAATCCCGAAATCACCTCCTCCTTGAC
CGAAGATGATTTGATCGAACGCTTACGTGCGATGACTATCCCTGAGGTAT
CTGATTTACAACAGAAAAATGACTCGTTTATCTTTGACGATATGTCACAA
AGCGGTGATCAAACAGACGGGACATCGAGTCTCAAAAATGATAAACCAAC
GCGGTTGCTATGCGATCGACCTTCTATACAATCACCAGACTTCGAAGAAC
TGGAAGCTTCAGCGGgaactgttcacaaaaacattCTTCATTTACGGCAA
GATTTAGACAACCTTCGAAAAGTTCATCAAGATTTTTCCAGGTCTTTCAA
AGCAGACATGCAAAAGAAATTACTTGAGTTCAGAAAGAAAGCATCAAGGT
TGGATGAACACCTCCAAAACAAGCTAGACAacaacaataatcactttttc
GAGCCGAAGAGGTCGAACAGGGTCAAATCCCGAAATCACCTCCTCCTTGA
CCGAAGATGATTTGATCGAACGCTTACGTGCGATGACTATCCCTGAGGTA
TCTGATTTACAACAGAAAAATGACTCGTTTATCTTTGACGATATGTCACA
AAGCGGTGATCAAACAGACGGGACATCGAGTCTCAAAAATGATAAACCAA
CGCGGTTGCTATGCGATCGACCTTCTATACAATCACCAGACTTCGAAGAA
CTGGAAGCTTCAGCGGgaactgttcacaaaaacattCTTCATTTACGGCA
AGATTTAGACAACCTTCGAAAAGTTCATCAAGATTTTTCCAGGTCTTTCA
AAGCAGACATGCAAAAGAAATTACTTGAGTTCAGAAAGAAAGCATCAAGG
TTGGATGAACACCTCCAAAACAAGCTAGACAacaacaataatcacttttt
cGCCAAAGAGTTACCAGTTCGAGAACAGAGATTCAAATTGACTTCAGACC
AAACACATTATCGGACCTTGTTGGCTGATTCAGAAAAACAATTATCCCAA
AGAGTTACCAGTTCGAGAACAGAGATTCAAATTGACTTCAGACCAAACAC
ATTATCGGACCTTGTTGGCTGATTCAGAAAAACAATTATCTGAACTAGAA
ATTCATATCGAGTTGATTCGACTGAACGTGGTGCAAACAAAACGAATCGA
ACATCCATCCCAGATTGAGGATTTTCGTGATGAGTTAACAGACGTAGTCA
AGAATATCAGCATTGCCAAAATGAACTAGAAATTCATATCGAGTTGATTC
GACTGAACGTGGTGCAAACAAAACGAATCGAACATCCATCCCAGATTGAG
GATTTTCGTGATGAGTTAACAGACGTAGTCAAGAATATCAGCATTGCCAA
AAAGAAATATCACGGTTTGGAAGAGACGCTGAAACAGGTCATTCATGCTG
AGCTAGAAGTCATACAAAGAGAGGAACAAGAAATATCACGGTTTGGAAGA
GACGCTGAAACAGGTCATTCATGCTGAGCTAGAAGTCATACAAAGAGAGG
AACAGTTTCGGAAAGAAGAGCCAAAGAGGATCGAAAATATGATCAAAAGG
TGTCGTAAAATATCTTCCACCGTCGAAACTTTGCAGAAGTTTCGGAAAGA
AGAGCCAAAGAGGATCGAAAATATGATCAAAAGGTGTCGTAAAATATCTT
CCACCGTCGAAACTTTGCAGAAattGACACAGATCCAAAATGATGATAAA
CATTTTCGTAAAAGAAAAGATACCTTGGTATAAattGACACAGATCCAAA
ATGATGATAAACATTTTCGTAAAAGAAAAGATACCTTGGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:961864..964299 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 844-903:2377 |
| Aaloc | 760-840:2141 |
| Aaloc | 685-756:1696 |
| Aaloc | 553-681:1379 |
| Aaloc | 460-549:982 |
| Aaloc | 7-456:1 |
|
