|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1049674..1052126+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038881 ID=XLOC_038881|Name=XLOC_038881|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2453bp|location=Sequence derived from alignment at sc0000005_pilon:1049674..1052126+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCATCGGGTGTTTCAATCCACCTAACCAAGTCCTGCAAATTCTTAGTGG
AACATATGGACGAACGAACTCTCATTCGTGCCGTTCATACAGCAAATTCT
CGAATGATGATAACAAGAAATGTTGGCATGATGTTACAAAGTATGCTAAT
TGTTTTAAAGTCTGTGTAACAGTGGGTATTAAGGAAAAGGATGCTAcaca
tcttttttttataagcaaccaggttgctaaggctcgagGGCTCAGatttg
ccaatttttttgctattttgtaaagtaaaagctttttgaaTAATCAAAGC
ACGGCAAACGATAGCAATTGACCCAATAAGcttaaatatggtataatatc
aggggtgacCCAAAgtaatagaatgctaagcaactccacggaaaattaaa
tttgcttataaaaaatgtgtacatgGACTACGCATTTCCCAGAAGGGAAC
AAAACACCAAATCGACggattaagggctctgaccatagtcggaaaattga
ttttagtatttgaaaacaaaagttatgttttaggtatTTAGGAAAAGGAT
ACTTACTACACATTCcaatttttttactatttcgtaaagtaaaagctttt
tagataatctaagcatGACAAACGATAGCCATTGACCCACAAATATGGTA
AAATATCAGAGTGACCCAAAGCAATATAATGCTAAGATAGAGTGCTGACC
CGAtatttgcttataaaaatgtggaCATGGACTACACAAAACACCAAATC
GACggattaagatttttgaaaaagtagaaCTTTTTTGAGTATCTTTAGGG
TAATCTTTTTGCAAGTTTGGTaacaacttttgaaaaatagctTTTTACTA
TGTTCAATATGTTATTTTAAATATGTTATAACTTTTAACGAAATTTTATC
CTCCATAGGCTGTGAAGTGTAACTTGCCCCCCTACCCCGAGTTTTGTTtt
cgttgaaaatatattcaggAATGCAAcattattaaaagtaaaatgaaaTG
CAGATTATATCAATATATAGATTATGACAGAGTTTAATCGTGTTTCAAGG
TATCTGAAAAAATCTTGTGATGGCCAAAGTGGATGTGGATtgcaaacaaa
gaaaattgaaaaagatttcggaaatccgtgcgaaaataaacaaaccagaa
aatTCTTGGAAGTCAAATTCAAATGTGTTTCCAAAGGTTTGTAAAATTAT
CAATAGTAAAAAATAAACTCTCCTCAATAGAAAATGCCTTAACTCTATAA
AGCAGTATCATAATGCAAGAGTTGGCTAAATTCTTATTTCAAACTCAAAG
TTCATGGTGCGTCCACGCCAATCTTCAGTGGAAAAGTTATGATacgattt
ttttgacatttgaggTCAACAAGGTTGCTTTGATTATTCAGGGAATTATG
TTTGTTTGTACAATACCGTGAATTCTAAATCATGGATTCGTAcagttgat
ttgaaattttcgccAGAGAAAAGatagatatttcaaaatgaaacctTTAC
TGGCAAGTGAACCGGtccgaaaaattttcgaaaattaataagcggggggg
acgtctattcgggacctttaaagtaagtaagtatatttaTCTGTCGGCTA
TGGGTGGAGCCGGGGTGAGGGAGTCTACTACCTTATCTATTTGTGCTCGA
CAAGATATAATAATTCTCATTATAGTTCAAACGACTCCCCAAATCGcaac
aacgaaacaggggaaaaaacgaacaacacaagcaacacaaacaacaaaga
caactacaataactacaaccgccatcccgccaactacaacaactacaacC
ACCACTCCACCAACGCCACCTCCTTATCTAAGAAGTaagaatacactctt
ttttgtaagaaccagtaaactttGGCCTTTTTTAAGcactttaagcctaa
aattgttcttattctgttcttaagttcaaggaaaatttcagaatttttta
aactttaattcCTATTTTAAGAGTTAGGCCTTTGATTTGCTAAAAATTCA
GCTATTccaggattgttcttaaattgcctttatttttttggcaattttga
gtCGCAGTATTCTTATAGAATtgcttttacaaaagaaaaagaggTATAGA
CCTGTATCTGAGATGTTGTTGTCGATGCTTTAACTGCGGTGTCTCTTGAA
AGAGTTTTAAATCACTACAACTTTAACTTTTTAACTTTATATTAAACATG
CTAAACTAGGTACTGAATATGTGAAATATCAGATAACTAAAATAATCACT
TCCAACTTCTTTTCATAGAGACATTGTGTCAAGGCAAAGGCTCCTTCATC
GGTTGCTTTACTCAAGGTTCTGTAATCCGGATATTGAATGCAACTTTCGG
GCGAACAGATCCCAACACTTGTCCCTCATCGAACCCCCGAAACGATGACA
TCACATGTTACATCAATGCTGTACCCTACACGAAGTTTCAATGCGAAGGA
AAA Coding sequence (CDS) from alignment at sc0000005_pilon:1049674..1052126+ >XLOC_038881 ID=XLOC_038881|Name=XLOC_038881|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1242bp|location=Sequence derived from alignment at sc0000005_pilon:1049674..1052126+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCATCGGGTGTTTCAATCCACCTAACCAAGTCCTGCAAATTCTTAGTGG
AACATATGGACGAACGAACTCTCATTCGTGCCGTTCATACAGCAAATTCT
CGAATGATGATAACAAGAAATGTTGGCATGATGTTACAAAGTCATCGGGT
GTTTCAATCCACCTAACCAAGTCCTGCAAATTCTTAGTGGAACATATGGA
CGAACGAACTCTCATTCGTGCCGTTCATACAGCAAATTCTCGAATGATGA
TAACAAGAAATGTTGGCATGATGTTACAAAGTATCTGAAAAAATCTTGTG
ATGGCCAAAGTGGATGTGGATtgcaaacaaagaaaattgaaaaagatttc
ggaaatccgtgcgaaaataaacaaaccagaaaatTCTTGGAAGTCAAATT
CAAATGTGTTTCCAAAGGTATCTGAAAAAATCTTGTGATGGCCAAAGTGG
ATGTGGATtgcaaacaaagaaaattgaaaaagatttcggaaatccgtgcg
aaaataaacaaaccagaaaatTCTTGGAAGTCAAATTCAAATGTGTTTCC
AAAGTTCAAACGACTCCCCAAATCGcaacaacgaaacaggggaaaaaacg
aacaacacaagcaacacaaacaacaaagacaactacaataactacaaccg
ccatcccgccaactacaacaactacaacCACCACTCCACCAACGCCACCT
CCTTATCTAAGAATTCAAACGACTCCCCAAATCGcaacaacgaaacaggg
gaaaaaacgaacaacacaagcaacacaaacaacaaagacaactacaataa
ctacaaccgccatcccgccaactacaacaactacaacCACCACTCCACCA
ACGCCACCTCCTTATCTAAGAAAGACATTGTGTCAAGGCAAAGGCTCCTT
CATCGGTTGCTTTACTCAAGGTTCTGTAATCCGGATATTGAATGCAACTT
TCGGGCGAACAGATCCCAACACTTGTCCCTCATCGAACCCCCGAAACGAT
GACATCACATGTTACATCAATGCTGTACCCTACACGAAGTTTCAATGCGA
AGGAAAAAGACATTGTGTCAAGGCAAAGGCTCCTTCATCGGTTGCTTTAC
TCAAGGTTCTGTAATCCGGATATTGAATGCAACTTTCGGGCGAACAGATC
CCAACACTTGTCCCTCATCGAACCCCCGAAACGATGACATCACATGTTAC
ATCAATGCTGTACCCTACACGAAGTTTCAATGCGAAGGAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1049674..1052126 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 439-621:2271 |
| Aaloc | 280-435:1678 |
| Aaloc | 142-276:1051 |
| Aaloc | 1-138:1 |
|
