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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1100825..1102803+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038879 ID=XLOC_038879|Name=XLOC_038879|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1979bp|location=Sequence derived from alignment at sc0000005_pilon:1100825..1102803+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATACCATTCAAGAGAACCAGGCAATCAAGACATCCCTAATCTCACA
AAGGGATGAACGAGCAAGCACCTCCAGCACTGGCAGCGATACGGTTCCCT
TGGTGAGAGATTGCGGAAAAGAGGACTCCAGTTTCATAGATGTGGAAAAT
TCACGAAATACAAAATCTGCTAAAGAAATGGAAGGGGAAACTCATTTTAG
CATGGCCTTTGAAAGATACTTTTTTGGAAAGCACTCCGCTTATAGGGAGA
GAACAATTCTGGGAGTATTATTGACCATCttgttgatttctttgatCGTT
TTGGTGATTTATGTTTACGAACGAATGAAAGAATCTAATGAATATTATGA
TCGTGAAATTCATTATTTGAGAAACAAGATTGAGAGTAGAGATCTTGAAT
ATGCTGAAAAGAACCCCAAACTAACGAAGCCAGCTTATACAGGACGCGAA
AGAAAGGCTGGAACTTCTTTCGCTTTTGATAAGGTAGGTTGCGAATACTG
TAAACATAAAAATCTTTCTGTAGTCCCTATAACTGTCAGTCTTTTGATTA
AAAGTTGGCATAATGCCAAGACTCTGTTTTCTGATATCATAACAACAAAA
GATTTCATTGACTGCATACTATAATTACGGCCACATCAACAAATAGTAAG
ATTCCCTGTGGGGAATGACACTAAAGGACTCACGATGTTGTCATTGTTCC
TATAATAACATAATTTTAATCACAAAATTTGATATGGTTTCCGCAtaaat
tatgttaattattaTCCAATCAACATATAAAACTCGATTCAACCGCCCTT
ATAAGCACCCCTTAAGCATCGTTGTAAGTAGTAGTTGTAAGAATGTATTG
AAAGTGTTAAGAATATTCTcaataatataatattttaaaGAAGTATTTCA
GATAACTCTGACAGTGATAAATGTACGATCAACTTAAAATGTAAGAGTTC
AAACAAATTCAAACAAATGTATGTCCGTTAAAGAATTGAACATCTAGAAA
TTCGTGTACaaacaaattttcttaaaaacagGTCAGAGATACCTAAACAG
GTCAAAACATCACAGCATGAAACCTTGCCCGTATTTgcattcaaaataaa
acagatCCACAAGCTATCAGCTTGCATTTTGACATGTGATTTAATTTCAA
AGGTCACTGGATACCTCACTTTAACTTTAACTCAATTCTCCCTTAATCaa
tttaaaatacaaaaactcagcaataaaattgacaaaaactgaAAGTAACG
AAGTTACTGCAAACGCCCTTTGGAAACGCCCTCTAAAATTTCTACCCCAT
GATTAACTATCAGCTGgaagaaagaaaacttttggtcAAGTCAGATCAAC
AAGGCGTTATATTATAGTTTTGCTGATAAAGCGTGGCTTAAATATCAAAA
TGACCGATTCTTAATTTTCAGGGTTATGACAATTTTGGCAAAGTTATGAT
CAAGGTTGTTGGTAGTGGGGGCTTAGACAAAAGCCAAACCGATACAGCAC
TCAATCACTGGCAAGAAAATCTACGACAAGGAAACATCAGTTTCTACCAA
GGTCGAGAAGTCATTATCAAAATCGCTGGCTACTACCTGATACAAGTTAG
GGTAGGTATCATAGCTTTTTAAATCTAATGCCGGTTTTCTTGGTGTGAAT
TCCTGTGAATTCTATggcttaaaaaaatttcaaacgtaatttctttgttt
ttttttatctttttacagATGTTTTTCAAGGGCAATGAGAATTACGCTGG
ACAACATTTAGATTATGGTGTGGTCAGAAAAGGTTTACATAAAGAAACAA
TTTTCATTAGCTCTGCAACTCGACCGAAAGATATTTGTGGGAGAGCATGC
TCCCTGTCTATCTCAGAGATTGTGCGTTTGGATGAAGGAGACATGTTGAG
CATCCAGACAAAAAAGAGCGGGCAGACCTTTGGCATGTATAAAGATAAAG
CAAGTTTCGGTGTTTGTAAACTCAATTAA Coding sequence (CDS) from alignment at sc0000005_pilon:1100825..1102803+ >XLOC_038879 ID=XLOC_038879|Name=XLOC_038879|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000005_pilon:1100825..1102803+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATACCATTCAAGAGAACCAGGCAATCAAGACATCCCTAATCTCACA
AAGGGATGAACGAGCAAGCACCTCCAGCACTGGCAGCGATACGGTTCCCT
TGGTGAGAGATTGCGGAAAAGAGGACTCCAGTTTCATAGATGTGGAAAAT
TCACGAAATACAAAATCTGCTAAAGAAATGGAAGGGGAAACTCATTTTAG
CATGGCCTTTGAAAGATACTTTTTTGGAAAGCACTCCGCTTATAGGGAGA
GAACAATTCTGGGAGTATTATTGACCATCttgttgatttctttgatCGTT
TTGGTGATTTATGTTTACGAACGAATGAAAGAATCTAATGAATATTATGA
TCGTGAAATTCATTATTTGAGAAACAAGATTGAGAGTAGAGATCTTGAAT
ATGCTGAAAAGAACCCCAAACTAACGAAGCCAGCTTATACAGGACGCGAA
AGAAAGGCTGGAACTTCTTTCGCTTTTGATAAGATGGATACCATTCAAGA
GAACCAGGCAATCAAGACATCCCTAATCTCACAAAGGGATGAACGAGCAA
GCACCTCCAGCACTGGCAGCGATACGGTTCCCTTGGTGAGAGATTGCGGA
AAAGAGGACTCCAGTTTCATAGATGTGGAAAATTCACGAAATACAAAATC
TGCTAAAGAAATGGAAGGGGAAACTCATTTTAGCATGGCCTTTGAAAGAT
ACTTTTTTGGAAAGCACTCCGCTTATAGGGAGAGAACAATTCTGGGAGTA
TTATTGACCATCttgttgatttctttgatCGTTTTGGTGATTTATGTTTA
CGAACGAATGAAAGAATCTAATGAATATTATGATCGTGAAATTCATTATT
TGAGAAACAAGATTGAGAGTAGAGATCTTGAATATGCTGAAAAGAACCCC
AAACTAACGAAGCCAGCTTATACAGGACGCGAAAGAAAGGCTGGAACTTC
TTTCGCTTTTGATAAGGGTTATGACAATTTTGGCAAAGTTATGATCAAGG
TTGTTGGTAGTGGGGGCTTAGACAAAAGCCAAACCGATACAGCACTCAAT
CACTGGCAAGAAAATCTACGACAAGGAAACATCAGTTTCTACCAAGGTCG
AGAAGTCATTATCAAAATCGCTGGCTACTACCTGATACAAGTTAGGGGTT
ATGACAATTTTGGCAAAGTTATGATCAAGGTTGTTGGTAGTGGGGGCTTA
GACAAAAGCCAAACCGATACAGCACTCAATCACTGGCAAGAAAATCTACG
ACAAGGAAACATCAGTTTCTACCAAGGTCGAGAAGTCATTATCAAAATCG
CTGGCTACTACCTGATACAAGTTAGGATGTTTTTCAAGGGCAATGAGAAT
TACGCTGGACAACATTTAGATTATGGTGTGGTCAGAAAAGGTTTACATAA
AGAAACAATTTTCATTAGCTCTGCAACTCGACCGAAAGATATTTGTGGGA
GAGCATGCTCCCTGTCTATCTCAGAGATTGTGCGTTTGGATGAAGGAGAC
ATGTTGAGCATCCAGACAAAAAAGAGCGGGCAGACCTTTGGCATGTATAA
AGATAAAGCAAGTTTCGGTGTTTGTAAACTCAATTAAATGTTTTTCAAGG
GCAATGAGAATTACGCTGGACAACATTTAGATTATGGTGTGGTCAGAAAA
GGTTTACATAAAGAAACAATTTTCATTAGCTCTGCAACTCGACCGAAAGA
TATTTGTGGGAGAGCATGCTCCCTGTCTATCTCAGAGATTGTGCGTTTGG
ATGAAGGAGACATGTTGAGCATCCAGACAAAAAAGAGCGGGCAGACCTTT
GGCATGTATAAAGATAAAGCAAGTTTCGGTGTTTGTAAACTCAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1100825..1102803 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-930:1719 |
| Aaloc | 490-669:1422 |
| Aaloc | 430-489:424 |
| Aaloc | 1-423:1 |
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