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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:132157..137898- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038844 ID=XLOC_038844|Name=XLOC_038844|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5742bp|location=Sequence derived from alignment at sc0000323_pilon:132157..137898- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATCTCAAAGCCATAAATCCCTGCATAGGGAAAAGAGGAAAAGCTA
TATTTCTTTTTGTTTGCTTGGTGTATTCGTTGCAGTATTTATAAGTGCTT
ATCGTGATCCAAACTTTTGGTCAGACTCAAACCTGAAGAAGATTGGAAAT
AATTTTGTGAACAAAGTTTTAAAAAAATTCTCAAAAACCCAAGAAATAAG
ACCAAGAAGACCTAAAAAGAAAGACAAAATCACTGATAAAGAGGAAAGAT
TAATTATGACCTATAAATCTATCAAAGAATTTGCAACTGCAAACAAAAAA
CGTGAAGGTGGAGGTTTCATGGTGCGCAGACCCATTGGAGATAAAATAGA
CAATGTAGATCCATTTCTGATGCTTGATCATTTGGGACCAACTGTTTATG
GGCCAGGTGAAGCAATAGGAGCTCCAGATCATCCTCACAGAGGTTTTGAG
ACGGTTACTTATGTTATTGATGGTAAGTAAGGTTAAAGTTTCTATTTTTG
TTGATTTAACTGGCGGAACCTTTGATTTAGGGAAAACGTAAGATACAAAC
CTCCGAAATGTGATCCTTATCTCTGATCCCGTCTTTCTCTTTTCTGACTG
TCTGAGATTCTAAGACTTAGTTTCTCATTTCTGACTGAGTTTTCATACCT
GTCAATCATTTGTCCATCAATTTCGATCAGTCTAATTTTCGCACCAAGTG
GAATTCGAACCACCACCAAAGAAAGACCTTCAGATTCGGAAGCCAGCGCT
CTATCCCTTGAGCCATCGCCGCACAGCAAAATCACGCAATTCATAACATT
TTATACATACTAAACTGGCAAAATACGGGGGTAATGTTATTATAATATGG
GTAAAAATTTAAAATGTCGGAATGAGCAATAGCCGATCACATTTTGGAGG
TTTGTATCTTATGTTTTCCTTGATTTAGGCCCATTTTCAGCTTGGGAAAT
ACCTTCTGTTTCCATTTCAAGAAATGATGTGTGAATCATCAATGATTATG
ATGCAAGCAATCGACAAAAGAAACCCAGTCTAAGTGGGAAAAAATTTGCC
GAATGATTCGGTGATGAATGTCAATAAGTGACGATCCTCAAGGCGTACTG
GAACCGAGTGATATCCATTTCATGCATCAGTGACAGAACGGATGGTTGAT
GGTGGTATGGCACGAGCTTGTTGGAACGGTGGAACTGTGTGATGGGTTTC
ACGCTGACATTGTCGATTAAGAGCTTGAAAATCAACTACTCTGGGGTGAA
CCATCTGGTTTTCGGACCCAGAAGGCCCGGTGGCACCAAGATGTTGGTGT
GTTTGGTGGAACCTTTTCTATGACGCCAAGGGAAACATCTGCATCAAGTT
GCTTTTTTATCGTATCACGCCAATTAATAGGTACTTGGGCTGGGTGTGTA
CAGCTGAGGGAGTGGCGTCAGAACCGAAGGACCTTTCATCATCGGTAAAG
GCTGGTGACTACATTGGTTGAAGGTTGATGGCGCGAAACGTTCGAGGAGC
CATTGTTTCATCTGATCACTGTTCTCCTCTGTTGGCTCAAAGGGGAGCTC
GGAGGGGCGAGGTGGAGGCGCAGTGGCAAGGCAAACATTCACATGCATTG
TTGGGTTCAGCTTCTGCAAGAATTTCCTGGTCGGTGGAGGATGTGATAGA
TGCTGCCGCTCCGATAGAAGGAAAGTCAGTTGGAATTATTTTCATATTCT
CCATACCTTGGTAGAAGAAATCAATTGAGTCTGTAACATAAATCATTTCT
GGAGCTTCAATGTAATGTCCTTGTTTATCATGATCACAAAGACGGCTGAA
AAATGCACCCAATATATTGATCCCCTCACTGTTGGCTGAAAAATGCACCC
AATATATTGATCACTGTTGGCTGCAAACATTTTCTTCTTGGCGGGAACTA
TAAGCGCCTTTTATCAAACCCAGATTTTCGAAATGCTTTGACCATTAAAG
ACGATTGGGCTCCAGTGTCTGTGATAACTTTAACTTTACTGTATTTTACT
GGTAAGCTAAGTTCTTTATAGTCGGATTGATTAATGTAAAGTTTTAAGTT
GATTGAAGGTTGACTTTTCGAGTCCTTGATCATCCAGCCGTAAGAGCTGT
CGAAAATGTGATGAAGTAACGGTTAGATATGGGGTTTCCGAGAGGTGGCA
TTTGGTGGATTGGAGGATTTATTGCTGAAACTGGTAGATAAGCCACTAAC
AACATCGAATAAGGCACTGTTGTTGTGCTTGTTTTTGTTAGAGTTCTTAT
CTCTCCAACACTCAATAAATAAGTCAAATTCTCTCAGTTTCCCATAACGC
ATTTTGAATTTTTGAATTACTTTGTCGCAGTTCTTACATTTCGATTTTAA
CTGGAACTTTTTATTGAGGTCAGATTTGATTGGTGGTTTCTGATGGACAG
TTGAAGTGTTAGTAGCATCATGTTGGCCAGTGTAGGATGACATTGCACGG
ACTGTCATCTCCTTGTTTTCAATGAGCGAAATTCATTTAGAGTTAGTTTG
TCAAGTGTTGAGAACCCAAGAATGTTTTTTCTAATTTCCTCATCCCATAT
ACCGGAAATAATAACGTACTTTACAATGTCATCAGTATAATCAACATTTC
GGTTGCAGTCTTCTGATGGCAAACGCGCACACTTGGGCTTTACCCTTGAC
TTGAGCGGCGAAAGACCGAATAGGTTGACCGTGGTCTTGTTTTAATGATA
GCACTTCGGTTTTACAAATACTAGTGGCAGTGGATATAACTACAAGGCGA
CGAATAGCTGCTAGGAGTTGGTTCTCAGTACCATTATCAATGTTGTTAAT
GTCCTTAAATAGGTCATTTTCAAATTCACTATCACAGCATTTCCACAGTT
GTGTCGTGACCTGAGTTGCTGGAATGTCAGTTCCACGCTTAAAAAGATTC
CACTTCTTTGTGAATGTGTTCCACTCCTCGTCAGTAGTACCCCTTGTAAT
AGTAAGGTCTATCGGCTTTTGTTTGTCGGAGGGTGGAGTGGCAGGAGTGG
AATGCGCCAGAGCAAGGAGGTTCAGATGTGCTGCGGCCGCGATAGCATCA
TTCATGGTATGCAGAGGGGTTCTAGGTCCCCCCAGAAAATTTAGCCCCCC
CCCTAAAAATTAGGTACCCCCTGACATAAAACCTCTCAGCCCCCAGTAGA
ATGACCTAAGGTAAGAAGGATCAACACAGGGGGGGGGTGAAGCAGTTAGT
ACAAGACATCATGCCGGTTAGTACCGTAGTGGTGTGCCATATGAATTGGA
TAAAATCACTTAGTACTCAGATGTACTAACTGCAAAAAAGGGTGGTCCCC
TGCTAAAAATTTGCCAAATTTTGGTACTAATTGTGTAAAAAATAGGATTT
TGTGAGAAAATTAAAAAAAAAAGACCATATTTTACCAAAAAATTTTTTTG
GGAAGTAGATTTTTTTTTCAAATTTTCGAAATTTTTTTTTTAAATCTTAA
AAACAATTTGCTGGTTGCAATAGAAATTTGATTTTCTAAAATGTTGTTTT
TTCCTATTGAAAGCTATGGATATTGAATCATTTTTAAGATATTAAATTTG
ATTTTATTTGATTTTATTGAATTTATGAAGGTCAAAAGCCTTTTTCAAGG
CTAAATTCAGTTAGTACTAACTGTACTAAGTGTACCAAGGTGGTGGTGTT
ACTAGCTTCTTCCGAGAAAGCAGTTAGTAGGCATGATGTCTTGTACTAAC
TGCTTCACCCCCCCCCCCCTGATCAACAGATAAAATAAAGATGAAACAAA
GATGCTATTTTACACAAAACGAAGACTTTAAAAACTTTCTTGATATAAAA
GTTGAACTAAAACAATGAATCTGTGGATTGAAAGCAGAAAAAGATTACTC
CCAATTTTAAACAAAGCCAGCCCCCAGATCTTTCACATGCAGTTGTAGGC
CCCCCAGCAATATAGGTACCCCCTAAAAAATTAAATTTTGCCAGCCCCCA
GCCAGAATATGGTAAAAAAAAAATTAGGTCCCCCCTAATCTCTGGGGGGG
GGGTTCATACCATGTCATTGTCATCAGTTTGATATTCACAGATTGGACGG
TTGATCACAGGTGTTTTTCTTCTCCAATAAGTTCAAACATGAGCAAGTAT
TGCGTTCATTAGACCTTTTATTAGTCAATAAATATTTGAACTAAAATAAC
AAAATAAGAAATATATGAGATACTCATACAAAATTTAAAGGGGCTGTACA
AGTTAATACCTTTTTTTATTCAGGATGCCATGTTGAATAATTAAAAACTC
CAGCATTAAAGCAATATACATTAATTCATAATTGTTTAAAACAATGTGTG
TAAAATTCCATTTCATCAGCTGAGAAATGACTTTCTTCTTTTAGAATTTT
TGAATGTTTTCAAAATTCTAAAAACTTATTAAGAACATATTTTCAAACCC
TTTATAATTCGACTTTTTCAGGTGGGATTCATCACAAAGATAGTGCAGGT
AATGAAGGCAACCTTGGTCCTGGATGGGTGCAGTGGATGACAGCAGGGAG
TGGGGTGGTGCACAGCGAGATGCCCACTGATGAATTATTACGCACCGGTG
GGCGTATGGAAGGCTTCCAGTTATGGGTGAACCTACCAAAGAAATTCAAA
ATGAGTCCACCTCGATATCAAGATACTCCACCTGAGAAAATTCCAATCGT
CACATCGCCTGGTAATCAGTTCGACATTCATAACTTTCTTTGAAATAAAA
AGGTTCCCTCCCAATTGACTTCTTTTAAAACCTTGGTCTTATCTATAACC
GACATCCTTAAGGGGGACAAATGGCGCTACATCTTGAATATTTAAGAGGT
ACCCCTTTTTAAAAAGATTTCAATTAAAGAATTTGTTTGGCCACTATACT
ATTGAGAAAACTGCCTCCAGGGTAATTAAATCCTCCAGCGTCACGTCCCC
GTCGGTCGTCAAGGCCCCCGGAAATCCCGCATGTAATATGAATGTGAGTC
CAGTTAGGTCTGTTTCTCATTTCTTACTATTGTCAAATACTCATCAAAAT
TTCAACATCTTTTTTAGACGGTGGTACATCTGTGAAAGTGATTGCTGGAG
AATGTTTGGGAACCAAAGCAGCAATCGAGACAAAAATCCCAATCATGTTT
TTGGACATCAAAATAAATCGTGGAAGTTCATTTGATGTTTCCATTCCGGA
AAATACCAACTCGTTTGTTTACATTTGGAGAGGGAATGGGTTTATTGGTT
CAGATAAGAAACCAGTCACTATGGGACAGGTAAGGCTAAGACTTTTAACC
AAATATTTCATCCATTTTTTGATGACTGATATATTTATCAGCTACTAACG
CTTTGTTGATTCTTTTTCGACTTTTGAGAAATATATTTTGTCTGACCTTT
TATGCGCCATCACTCTTAAATTTCTTCTAACTCTTTTTTGCACTTTATTA
AAGGATTTTTTGGAACTGACAGATTGATACTTGGTTATGTATTATCTTTG
TAAAATTTTTCTTTACTAGGTTGCTTCATTGTCGAAAGAAGGAGATGTGT
TCCAACTAAATGCTTCTGAAGATAGCGCTCTCCACGCTTTCGTCATTGCT
GGCCAACCTATTGAGAAGCCGATCGCTAGGTACGGTCCCTTTGTGATGAA
CACATATGAAGAAATCCAGCAAGCGTTTGATGATTACCGAAACGGTCGAC
TTGGAAAGATCGATGGTGCAGAAGAAAGATATGCAAAAACTGAACAAGCT
AAACAGCAAAATAAACAATCGGGAAATTGGAATAAACATTAG Coding sequence (CDS) from alignment at sc0000323_pilon:132157..137898- >XLOC_038844 ID=XLOC_038844|Name=XLOC_038844|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000323_pilon:132157..137898- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATCTCAAAGCCATAAATCCCTGCATAGGGAAAAGAGGAAAAGCTA
TATTTCTTTTTGTTTGCTTGGTGTATTCGTTGCAGTATTTATAAGTGCTT
ATCGTGATCCAAACTTTTGGTCAGACTCAAACCTGAAGAAGATTGGAAAT
AATTTTGTGAACAAAGTTTTAAAAAAATTCTCAAAAACCCAAGAAATAAG
ACCAAGAAGACCTAAAAAGAAAGACAAAATCACTGATAAAGAGGAAAGAT
TAATTATGACCTATAAATCTATCAAAGAATTTGCAACTGCAAACAAAAAA
CGTGAAGGTGGAGGTTTCATGGTGCGCAGACCCATTGGAGATAAAATAGA
CAATGTAGATCCATTTCTGATGCTTGATCATTTGGGACCAACTGTTTATG
GGCCAGGTGAAGCAATAGGAGCTCCAGATCATCCTCACAGAGGTTTTGAG
ACGGTTACTTATGTTATTGATGATGAGATCTCAAAGCCATAAATCCCTGC
ATAGGGAAAAGAGGAAAAGCTATATTTCTTTTTGTTTGCTTGGTGTATTC
GTTGCAGTATTTATAAGTGCTTATCGTGATCCAAACTTTTGGTCAGACTC
AAACCTGAAGAAGATTGGAAATAATTTTGTGAACAAAGTTTTAAAAAAAT
TCTCAAAAACCCAAGAAATAAGACCAAGAAGACCTAAAAAGAAAGACAAA
ATCACTGATAAAGAGGAAAGATTAATTATGACCTATAAATCTATCAAAGA
ATTTGCAACTGCAAACAAAAAACGTGAAGGTGGAGGTTTCATGGTGCGCA
GACCCATTGGAGATAAAATAGACAATGTAGATCCATTTCTGATGCTTGAT
CATTTGGGACCAACTGTTTATGGGCCAGGTGAAGCAATAGGAGCTCCAGA
TCATCCTCACAGAGGTTTTGAGACGGTTACTTATGTTATTGATGGTGGGA
TTCATCACAAAGATAGTGCAGGTAATGAAGGCAACCTTGGTCCTGGATGG
GTGCAGTGGATGACAGCAGGGAGTGGGGTGGTGCACAGCGAGATGCCCAC
TGATGAATTATTACGCACCGGTGGGCGTATGGAAGGCTTCCAGTTATGGG
TGAACCTACCAAAGAAATTCAAAATGAGTCCACCTCGATATCAAGATACT
CCACCTGAGAAAATTCCAATCGTCACATCGCCTGGTGGGATTCATCACAA
AGATAGTGCAGGTAATGAAGGCAACCTTGGTCCTGGATGGGTGCAGTGGA
TGACAGCAGGGAGTGGGGTGGTGCACAGCGAGATGCCCACTGATGAATTA
TTACGCACCGGTGGGCGTATGGAAGGCTTCCAGTTATGGGTGAACCTACC
AAAGAAATTCAAAATGAGTCCACCTCGATATCAAGATACTCCACCTGAGA
AAATTCCAATCGTCACATCGCCTGACGGTGGTACATCTGTGAAAGTGATT
GCTGGAGAATGTTTGGGAACCAAAGCAGCAATCGAGACAAAAATCCCAAT
CATGTTTTTGGACATCAAAATAAATCGTGGAAGTTCATTTGATGTTTCCA
TTCCGGAAAATACCAACTCGTTTGTTTACATTTGGAGAGGGAATGGGTTT
ATTGGTTCAGATAAGAAACCAGTCACTATGGGACAGACGGTGGTACATCT
GTGAAAGTGATTGCTGGAGAATGTTTGGGAACCAAAGCAGCAATCGAGAC
AAAAATCCCAATCATGTTTTTGGACATCAAAATAAATCGTGGAAGTTCAT
TTGATGTTTCCATTCCGGAAAATACCAACTCGTTTGTTTACATTTGGAGA
GGGAATGGGTTTATTGGTTCAGATAAGAAACCAGTCACTATGGGACAGGT
TGCTTCATTGTCGAAAGAAGGAGATGTGTTCCAACTAAATGCTTCTGAAG
ATAGCGCTCTCCACGCTTTCGTCATTGCTGGCCAACCTATTGAGAAGCCG
ATCGCTAGGTACGGTCCCTTTGTGATGAACACATATGAAGAAATCCAGCA
AGCGTTTGATGATTACCGAAACGGTCGACTTGGAAAGATCGATGGTGCAG
AAGAAAGATATGCAAAAACTGAACAAGCTAAACAGCAAAATAAACAATCG
GGAAATTGGAATAAACATTAGGTTGCTTCATTGTCGAAAGAAGGAGATGT
GTTCCAACTAAATGCTTCTGAAGATAGCGCTCTCCACGCTTTCGTCATTG
CTGGCCAACCTATTGAGAAGCCGATCGCTAGGTACGGTCCCTTTGTGATG
AACACATATGAAGAAATCCAGCAAGCGTTTGATGATTACCGAAACGGTCG
ACTTGGAAAGATCGATGGTGCAGAAGAAAGATATGCAAAAACTGAACAAG
CTAAACAGCAAAATAAACAATCGGGAAATTGGAATAAACATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:132157..137898 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 925-1197:274 |
| Aaloc | 715-924:724 |
| Aaloc | 475-711:1320 |
| Aaloc | 1-471:5743 |
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