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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:242549..244714- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038840 ID=XLOC_038840|Name=XLOC_038840|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2166bp|location=Sequence derived from alignment at sc0000323_pilon:242549..244714- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGCATCACTGACCTCCATACAAGAAACCATCCCTTATACGGAGAA
TCGGCCGCGGGAAGAAATTCTGGACTACCTTGAGGTTCTTCAAGAGCTTG
CGAATACAAAAGCTCAACTATTTCACCAACAAGTGATCAGTGAAGAAAAC
AAAAGAAAACACAACCTGAGGGATGTGAAATGTCTTTCAACTAAATTATA
CGCGTCAATGAAGCGTGACGTCAACATCAACCAAGAGGTACATTTTATCT
TTGTTATGTGTACACTTTGTTCGCAATTCAAAAGTTCTTGAAAATTAATG
TTTCTTCTTACACCATGTTGAACCTATAAGGGTTAGAGGGGGAGCCAATA
ACTACCACTGCATCTGTCTAAAACACCCAATTTTAAAGAAAAAATGGACA
AAAGTACTGACAAAATGGTGAAAATAAAAACTACCGTGAAAAGCACAGGT
CGAAATCATATATCGACGCTGTGCCGACCAATCCAGATTCTATTCAGCGC
GCAATTAACACAGGGATAAGTAACCATGACGACCATCCAAGATCTTGGAT
GAAGTTCAAAGTTGATATTTTTATTCACATCGTTGAAAACACAACTCAAA
AATATCATCAATGCTTTTTAAAAAGAGTCAGTGATAGAGAATCATAACAT
AAAGTCTGTCTGTTATTTCGATTCAATTAAAGTGACATTTTCATACTTAA
AAGTTTAGTAATTACTGTTATACATTTGGGGATCATGTAAAAGATTTCTT
TTGAAAGAAACTCATTTCAATTACACTTGGAGGTTTCTGGGGGAATTCGT
AAATAGTAAACTGCATACTGATACAGTCTGCTAGACATTAATATTTGCTC
TTCATCTTTGATTTTTTTTCTACAGTGATTAGATTGACACATGCGCGATA
AAATTTCTATTATTGGTCTTCAGAGGTTGAAATATTATCATCCTCTGATA
CTCAGGGTAGCATATGTCTGGTTGAGGCACAAGATTTTTGTTCTAGCATG
CGATTATTGAGGATGGAAGAAGCTTAAATCTTTTTTACGAGATATTAGTG
CCGATAATTCTAAATTCAAGTTCGTCAAGTATTGATCAACGATGATAACT
TTTTCAGCTGATCGACGCCATCGAAGAATTTGTCGGTATGGAATGGATAA
ATGGTGGGTTGAGAGCTCTCTTCAAAAGAAGTCTGCAGAATGTTCTTACT
GGAGGTGAGAGATCTCTCAGAGCAATTAAACATATACATGACACAGTGCA
GAATTGTTTGCCCTTTGTTTCTAAAAGGTATTTTCAACAGTTTTAGTAAA
GCTTTTCAAAATGCCTGATAATCATCCAATTTTTCTCACATTGTAGACGG
TGAAAAGGAGAACAGGTCATCTTTCATCTATAACACTGATGGAGATTTTC
ATCGCATTGATTATTATATCTACAAACGAGATGTAAAATACGGACCGGTC
AGCAAATCCACAAACAACATTGTGGTGGTTGCTTTCTCAATATACTCAAT
CGACACTTCGCAAAATAATTCTATCGAAACTGATGAAGGTGTACACGAGA
AACCAAATATGACAGATGATCTAAAAGAAGGACCGGAATCTGTAGAGGGT
GGAAAAGAAGGACCAGAATCCGTAGAGGGCATAAAAGAAGTACCGGAATC
CGAAGAGGGCGTAAAAGAAGGACCAGAATCTGAAGAGGGTTTAAAAGAAG
GACCAGAATCTGAAGAAGGTGTTAAAGAAGGACCAGAGTCTGAAGAGGGC
GTAAAAGAAGAACCAGAATCTGAAGAGGGCGTAAAAGAAAGACTGACAAG
CGAGCACGAAGAAAATACAGGATCTGCGGAGACGACAAACGAACAACTGC
AAGCAATGGAAAAACTCGACGAAGAGCCTGAAGAAAAAGTAGACAGAGAT
GAAAGAAAAGAAGTTACCCAACCAACAGAAGAAATTACAAGGGGAATACT
ACAAAATGAGGACAACGAAAAAGAAGGTATATCAATAATTCTGAGCAAAA
TTGTTAAAATGAATTAGCTCCATTGAGAACGATTTACATATTTGTCTTAT
CTGCGGAGAGTCATTTTTCTTATTGTTTTTCCACTTTTTTTTCATCAGTT
TTCGAGGATTCTCCAACGGAAGAGAAGGCACAAGAAGTTTCACAACAGCA
GAACTCGCGTCAAGGT Coding sequence (CDS) from alignment at sc0000323_pilon:242549..244714- >XLOC_038840 ID=XLOC_038840|Name=XLOC_038840|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2064bp|location=Sequence derived from alignment at sc0000323_pilon:242549..244714- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGCATCACTGACCTCCATACAAGAAACCATCCCTTATACGGAGAA
TCGGCCGCGGGAAGAAATTCTGGACTACCTTGAGGTTCTTCAAGAGCTTG
CGAATACAAAAGCTCAACTATTTCACCAACAAGTGATCAGTGAAGAAAAC
AAAAGAAAACACAACCTGAGGGATGTGAAATGTCTTTCAACTAAATTATA
CGCGTCAATGAAGCGTGACGTCAACATCAACCAAGAGATGGGAGCATCAC
TGACCTCCATACAAGAAACCATCCCTTATACGGAGAATCGGCCGCGGGAA
GAAATTCTGGACTACCTTGAGGTTCTTCAAGAGCTTGCGAATACAAAAGC
TCAACTATTTCACCAACAAGTGATCAGTGAAGAAAACAAAAGAAAACACA
ACCTGAGGGATGTGAAATGTCTTTCAACTAAATTATACGCGTCAATGAAG
CGTGACGTCAACATCAACCAAGAGCTGATCGACGCCATCGAAGAATTTGT
CGGTATGGAATGGATAAATGGTGGGTTGAGAGCTCTCTTCAAAAGAAGTC
TGCAGAATGTTCTTACTGGAGCTGATCGACGCCATCGAAGAATTTGTCGG
TATGGAATGGATAAATGGTGGGTTGAGAGCTCTCTTCAAAAGAAGTCTGC
AGAATGTTCTTACTGGAGACGGTGAAAAGGAGAACAGGTCATCTTTCATC
TATAACACTGATGGAGATTTTCATCGCATTGATTATTATATCTACAAACG
AGATGTAAAATACGGACCGGTCAGCAAATCCACAAACAACATTGTGGTGG
TTGCTTTCTCAATATACTCAATCGACACTTCGCAAAATAATTCTATCGAA
ACTGATGAAGGTGTACACGAGAAACCAAATATGACAGATGATCTAAAAGA
AGGACCGGAATCTGTAGAGGGTGGAAAAGAAGGACCAGAATCCGTAGAGG
GCATAAAAGAAGTACCGGAATCCGAAGAGGGCGTAAAAGAAGGACCAGAA
TCTGAAGAGGGTTTAAAAGAAGGACCAGAATCTGAAGAAGGTGTTAAAGA
AGGACCAGAGTCTGAAGAGGGCGTAAAAGAAGAACCAGAATCTGAAGAGG
GCGTAAAAGAAAGACTGACAAGCGAGCACGAAGAAAATACAGGATCTGCG
GAGACGACAAACGAACAACTGCAAGCAATGGAAAAACTCGACGAAGAGCC
TGAAGAAAAAGTAGACAGAGATGAAAGAAAAGAAGTTACCCAACCAACAG
AAGAAATTACAAGGGGAATACTACAAAATGAGGACAACGAAAAAGAAGAC
GGTGAAAAGGAGAACAGGTCATCTTTCATCTATAACACTGATGGAGATTT
TCATCGCATTGATTATTATATCTACAAACGAGATGTAAAATACGGACCGG
TCAGCAAATCCACAAACAACATTGTGGTGGTTGCTTTCTCAATATACTCA
ATCGACACTTCGCAAAATAATTCTATCGAAACTGATGAAGGTGTACACGA
GAAACCAAATATGACAGATGATCTAAAAGAAGGACCGGAATCTGTAGAGG
GTGGAAAAGAAGGACCAGAATCCGTAGAGGGCATAAAAGAAGTACCGGAA
TCCGAAGAGGGCGTAAAAGAAGGACCAGAATCTGAAGAGGGTTTAAAAGA
AGGACCAGAATCTGAAGAAGGTGTTAAAGAAGGACCAGAGTCTGAAGAGG
GCGTAAAAGAAGAACCAGAATCTGAAGAGGGCGTAAAAGAAAGACTGACA
AGCGAGCACGAAGAAAATACAGGATCTGCGGAGACGACAAACGAACAACT
GCAAGCAATGGAAAAACTCGACGAAGAGCCTGAAGAAAAAGTAGACAGAG
ATGAAAGAAAAGAAGTTACCCAACCAACAGAAGAAATTACAAGGGGAATA
CTACAAAATGAGGACAACGAAAAAGAAGTTTTCGAGGATTCTCCAACGGA
AGAGAAGGCACAAGAAGTTTCACAACAGCAGAACTCGCGTCAAGGTTTTT
CGAGGATTCTCCAACGGAAGAGAAGGCACAAGAAGTTTCACAACAGCAGA
ACTCGCGTCAAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:242549..244714 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 967-1032:67 |
| Aaloc | 337-963:819 |
| Aaloc | 238-333:1060 |
| Aaloc | 1-237:2167 |
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