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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000323_pilon:231416..234651- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038836 ID=XLOC_038836|Name=XLOC_038836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3236bp|location=Sequence derived from alignment at sc0000323_pilon:231416..234651- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTTTACAGTTTTGATGATTCCTATTCGTCAGCGTACGAAAACAG
TGAAGCGATCGACAGTGCTCGTTCCAATTACACCACTATTGGGGAAAGTG
AAGAGTCGTATACCAAAGTCAAAGTACTGGGTCGTGGTGCATTCGGTGAA
GCAGTGTTGTATCGGAAAACAGCAACCAATGATTTGGTGGTGTGGAAAGA
GATCAATTTACAGCGCGCGTCCGATAAAGAGCGCACGGGCGCACTGAATG
AAGTAGAGATTCTATCATTGTTAGATCACATTAATGTGGTTGCATATTAT
AACCATTTTTTCGATGGTGCTTCACTGTTCATCGAGATGGAATACGCAAA
TGATGGCTCACTACACCACAAAATTATTTCACGAGACGGAAAGCTTTTCC
CGGAAAACGAGGCTCTGCTTTATTTCTACCAATTAGTATCAGCTGTCAGT
TATATCCACAATTTTGGTATTCTACATCGAGATATTAAAACGTTAAATAT
TTTTATGACCAAATCTAAACTGATAAAACTTGGTGATTTTGGAATCTCAA
AAGTTCTTGAAGAGACCTATGGACAAGCAGAGACTTGTGTTGGGACACCA
TATTACATGAGCCCTGAGCTGGTCAAAGGTGATCCGTATAACCAAAAGTC
TGACGTATGGGCTTGTGGTTGTGTTTTGTTTGAAATTTTCGCTCTCAAGA
AAGTTTTTGAGGCGAGTAACCAATTGAAATTGATCACTTCGATTCTTGAG
AAAGATGTTGGTGAGATTAGTGATGTTTACAGCGAGGAAGCACAACGTAT
TGTTCGCTCAACTCTCGAGAAAGATCCTGAAAAACGACCCACTACTGAGG
AATTAAGCCAACTACCCATTTTTGATAAATCGAAACTGACATTAGTAAAT
ACACCTCGAGTACCACCCTTGTTGAGACGTATTTCATCACAAAGGTCGGT
CGTTTCCACCCCTCTAACGCCCACCGCCCCTGTATCAGTGTCTACCCTCG
CAAGTAGTGTTTTCACGTGGGGCGGCGGAAAAGTGGTGCCACAAAAACTT
GAGACGTTTGCTGAGGGTCAGAGCGGGATTCAAGTTTCGGCTGGATTCTC
GCACTTTGCTGTTATCACCATTGAAAAGGAAGTCTACACGTGGGCCAACA
TTCAAGGAGGTATTCCTTTTTATCTTCATCATTTCTAGATCTCATTTTGA
ATCGAGATAAAGTAAGAATATATCCAAACAGTTAGTTTTTTGTTTCATTG
TTAAACTCCTTTTGATATTAAAGTATGAGCCCTTGAAAATCCTCTGTAAG
TTTTCTTGTGAAGGTCACGCTTGCAATCTTCAGTTCTCGTTAAAATACTA
CATATTTCCCTTGCATTGTCAACTCTTGCTCTCTCGATGGTTAGACCTTA
AGGGAACTTATTTTGGCGGGAACTAATTTTGACGAGCGGCAAAAATCCTG
AAAATTTTTAATTTTTGCGGGAACAAATTTTGACGAATTTTGTCTAAATT
CACCGAAATCGCCAAAATTAGTTCTCGCCAAAATTAAGTTCACTTAAGTT
AATAATTATTTCATTTTATCATCAGGTACTGAGATCGTCGGCCAATTGGG
ACACGGAAATACCGCCATGTATCGCTCACCGAAGAAAGTGGAATTTTTCA
ACGGGATACCCATTAAACAGGTGGCTTGTGGCGAAGATTTCACCGTATTC
TTAAGTGATAGTGGAAACGTATACGCGTGTGGATCTGATTATTCTGGTTG
TATCGGCTGTGATGAGTCGCTTGGTGATAAAGTGTTAACTCCTCATCAAA
TAGAGACGTTCGATGGTAAATTCGTGAAACGAATAGCTTGTGGTGATTCT
CACGTTGTTGCAATGACCGACCAAGGAGAAGTGTACGCGTGGGGTTGTGG
AGAGTATGGAAGATTAGGTCTTGGCCATGAGGACGACTGCAGTACGCCAC
AGTTGGTGCCGCTACCCAAAAACTATTCCTCGTGTATCATTGATGTAGCA
TGTGGGCGTGATAACACTTTCTTATTGACAACACAAGGACATTTATTGGC
TTTTGGAAGTAACGAAGATAATAAGATGGCCTTGAACCAAACAGTGCATT
TGAAAGGCGGTGGCAAAAATAGAGAAATTGATTTCGTATATTATGTCAGT
AAGCCAACCCCTGTGAGAGCACTGAACAGTTATCGGTTAGTAGCGGTGGC
ATCTGGCAAATCTCACTCTGCAGCTTTAGATGAGTATGGCAGACTGCTGA
CTTTTGGTGCAAATAAATATGGTCAGTTAGGAGTCGGTGATTACAAGCCG
AGAATCTCGCCCTCTTTAGTTAGAGGTAGTTTGACCGGAAAGGAAGTCAT
TTTGTGCGCATGTGGAGATGGCTTTACTGTCGTTGCAACGAAAGATAGTC
AGATCTTCTCTTGGGGGTCAGCTAAAAACGGTCGCCTCGGAATACAACTT
GCTGCTGGAAAATCTCTCTGCTCAACACCGAAACCTATTTTTGGTTCACT
TCACAAAGTTGCTAGTCTATCGTGTAGGCATTGGAATACTATCATTCTAG
CTGAGAAGCTGATCGACTCCAAGCTAATTCATACGAAGGAATTGAGTATG
ACAGAGGAAGGTTTTGGCGGACAAGGTCGGAATTATAAAGCAGTTATTGG
TGAAGAGCAAACATCGGCCAGTTTTCAATTCGATGATATTCCTTTTGATA
ATGAGAGTGACGCCAAACCTAAACGCAAACTTGAGCGACAGGAATCAACG
CGAGAGGATAAATTGAGCGACGAAGATGATTCGATGCCACCGTGGCTCGT
GGATGAGTTACAAAATGCTGAAGTTATTCCTATGAAGGGAGGCGAGAACG
AAGACCGACCGGCGACGAAAAACGACGATGATAGCGATAATGAAGACTCG
GTACCGGCTTGGTTAGCCGATGAAATGGAAAACGCCGAGTTTATCCCGAT
GGATAACGAGAATGTGTTTGAACAACCGACTAAAGGGAGAAGTGTTTCTG
TTAGAGAAACTTTCCAATCTGTCAGAGCGTCTTCTATAGAGAAATGTTCA
CAATGTTTGAACCGAAAACCAGACGTTTTAGAGATGCGAATTAAGGAATT
GGAATTTGAAAAAGCGCAACTGACGAAACGTGTCTCGGAGCAAGAGGTTT
TGATTAAGAAATTAGAATCAGAAAAAGAGTGCTATCAAAAGTTTACTTTT
CAATTGAAAGAAGTTACTCAACAGTTGCCTGATGAA Coding sequence (CDS) from alignment at sc0000323_pilon:231416..234651- >XLOC_038836 ID=XLOC_038836|Name=XLOC_038836|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5640bp|location=Sequence derived from alignment at sc0000323_pilon:231416..234651- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTTTACAGTTTTGATGATTCCTATTCGTCAGCGTACGAAAACAG
TGAAGCGATCGACAGTGCTCGTTCCAATTACACCACTATTGGGGAAAGTG
AAGAGTCGTATACCAAAGTCAAAGTACTGGGTCGTGGTGCATTCGGTGAA
GCAGTGTTGTATCGGAAAACAGCAACCAATGATTTGGTGGTGTGGAAAGA
GATCAATTTACAGCGCGCGTCCGATAAAGAGCGCACGGGCGCACTGAATG
AAGTAGAGATTCTATCATTGTTAGATCACATTAATGTGGTTGCATATTAT
AACCATTTTTTCGATGGTGCTTCACTGTTCATCGAGATGGAATACGCAAA
TGATGGCTCACTACACCACAAAATTATTTCACGAGACGGAAAGCTTTTCC
CGGAAAACGAGGCTCTGCTTTATTTCTACCAATTAGTATCAGCTGTCAGT
TATATCCACAATTTTGGTATTCTACATCGAGATATTAAAACGTTAAATAT
TTTTATGACCAAATCTAAACTGATAAAACTTGGTGATTTTGGAATCTCAA
AAGTTCTTGAAGAGACCTATGGACAAGCAGAGACTTGTGTTGGGACACCA
TATTACATGAGCCCTGAGCTGGTCAAAGGTGATCCGTATAACCAAAAGTC
TGACGTATGGGCTTGTGGTTGTGTTTTGTTTGAAATTTTCGCTCTCAAGA
AAGTTTTTGAGGCGAGTAACCAATTGAAATTGATCACTTCGATTCTTGAG
AAAGATGTTGGTGAGATTAGTGATGTTTACAGCGAGGAAGCACAACGTAT
TGTTCGCTCAACTCTCGAGAAAGATCCTGAAAAACGACCCACTACTGAGG
AATTAAGCCAACTACCCATTTTTGATAAATCGAAACTGACATTAGTAAAT
ACACCTCGAGTACCACCCTTGTTGAGACGTATTTCATCACAAAGGTCGGT
CGTTTCCACCCCTCTAACGCCCACCGCCCCTGTATCAGTGTCTACCCTCG
CAAGTAGTGTTTTCACGTGGGGCGGCGGAAAAGTGGTGCCACAAAAACTT
GAGACGTTTGCTGAGGGTCAGAGCGGGATTCAAGTTTCGGCTGGATTCTC
GCACTTTGCTGTTATCACCATTGAAAAGGAAGTCTACACGTGGGCCAACA
TTCAAGGAGATGTCATTTTACAGTTTTGATGATTCCTATTCGTCAGCGTA
CGAAAACAGTGAAGCGATCGACAGTGCTCGTTCCAATTACACCACTATTG
GGGAAAGTGAAGAGTCGTATACCAAAGTCAAAGTACTGGGTCGTGGTGCA
TTCGGTGAAGCAGTGTTGTATCGGAAAACAGCAACCAATGATTTGGTGGT
GTGGAAAGAGATCAATTTACAGCGCGCGTCCGATAAAGAGCGCACGGGCG
CACTGAATGAAGTAGAGATTCTATCATTGTTAGATCACATTAATGTGGTT
GCATATTATAACCATTTTTTCGATGGTGCTTCACTGTTCATCGAGATGGA
ATACGCAAATGATGGCTCACTACACCACAAAATTATTTCACGAGACGGAA
AGCTTTTCCCGGAAAACGAGGCTCTGCTTTATTTCTACCAATTAGTATCA
GCTGTCAGTTATATCCACAATTTTGGTATTCTACATCGAGATATTAAAAC
GTTAAATATTTTTATGACCAAATCTAAACTGATAAAACTTGGTGATTTTG
GAATCTCAAAAGTTCTTGAAGAGACCTATGGACAAGCAGAGACTTGTGTT
GGGACACCATATTACATGAGCCCTGAGCTGGTCAAAGGTGATCCGTATAA
CCAAAAGTCTGACGTATGGGCTTGTGGTTGTGTTTTGTTTGAAATTTTCG
CTCTCAAGAAAGTTTTTGAGGCGAGTAACCAATTGAAATTGATCACTTCG
ATTCTTGAGAAAGATGTTGGTGAGATTAGTGATGTTTACAGCGAGGAAGC
ACAACGTATTGTTCGCTCAACTCTCGAGAAAGATCCTGAAAAACGACCCA
CTACTGAGGAATTAAGCCAACTACCCATTTTTGATAAATCGAAACTGACA
TTAGTAAATACACCTCGAGTACCACCCTTGTTGAGACGTATTTCATCACA
AAGGTCGGTCGTTTCCACCCCTCTAACGCCCACCGCCCCTGTATCAGTGT
CTACCCTCGCAAGTAGTGTTTTCACGTGGGGCGGCGGAAAAGTGGTGCCA
CAAAAACTTGAGACGTTTGCTGAGGGTCAGAGCGGGATTCAAGTTTCGGC
TGGATTCTCGCACTTTGCTGTTATCACCATTGAAAAGGAAGTCTACACGT
GGGCCAACATTCAAGGAGGTACTGAGATCGTCGGCCAATTGGGACACGGA
AATACCGCCATGTATCGCTCACCGAAGAAAGTGGAATTTTTCAACGGGAT
ACCCATTAAACAGGTGGCTTGTGGCGAAGATTTCACCGTATTCTTAAGTG
ATAGTGGAAACGTATACGCGTGTGGATCTGATTATTCTGGTTGTATCGGC
TGTGATGAGTCGCTTGGTGATAAAGTGTTAACTCCTCATCAAATAGAGAC
GTTCGATGGTAAATTCGTGAAACGAATAGCTTGTGGTGATTCTCACGTTG
TTGCAATGACCGACCAAGGAGAAGTGTACGCGTGGGGTTGTGGAGAGTAT
GGAAGATTAGGTCTTGGCCATGAGGACGACTGCAGTACGCCACAGTTGGT
GCCGCTACCCAAAAACTATTCCTCGTGTATCATTGATGTAGCATGTGGGC
GTGATAACACTTTCTTATTGACAACACAAGGACATTTATTGGCTTTTGGA
AGTAACGAAGATAATAAGATGGCCTTGAACCAAACAGTGCATTTGAAAGG
CGGTGGCAAAAATAGAGAAATTGATTTCGTATATTATGTCAGTAAGCCAA
CCCCTGTGAGAGCACTGAACAGTTATCGGTTAGTAGCGGTGGCATCTGGC
AAATCTCACTCTGCAGCTTTAGATGAGTATGGCAGACTGCTGACTTTTGG
TGCAAATAAATATGGTCAGTTAGGAGTCGGTGATTACAAGCCGAGAATCT
CGCCCTCTTTAGTTAGAGGTAGTTTGACCGGAAAGGAAGTCATTTTGTGC
GCATGTGGAGATGGCTTTACTGTCGTTGCAACGAAAGATAGTCAGATCTT
CTCTTGGGGGTCAGCTAAAAACGGTCGCCTCGGAATACAACTTGCTGCTG
GAAAATCTCTCTGCTCAACACCGAAACCTATTTTTGGTTCACTTCACAAA
GTTGCTAGTCTATCGTGTAGGCATTGGAATACTATCATTCTAGCTGAGAA
GCTGATCGACTCCAAGCTAATTCATACGAAGGAATTGAGTATGACAGAGG
AAGGTTTTGGCGGACAAGGTCGGAATTATAAAGCAGTTATTGGTGAAGAG
CAAACATCGGCCAGTTTTCAATTCGATGATATTCCTTTTGATAATGAGAG
TGACGCCAAACCTAAACGCAAACTTGAGCGACAGGAATCAACGCGAGAGG
ATAAATTGAGCGACGAAGATGATTCGATGCCACCGTGGCTCGTGGATGAG
TTACAAAATGCTGAAGTTATTCCTATGAAGGGAGGCGAGAACGAAGACCG
ACCGGCGACGAAAAACGACGATGATAGCGATAATGAAGACTCGGTACCGG
CTTGGTTAGCCGATGAAATGGAAAACGCCGAGTTTATCCCGATGGATAAC
GAGAATGTGTTTGAACAACCGACTAAAGGGAGAAGTGTTTCTGTTAGAGA
AACTTTCCAATCTGTCAGAGCGTCTTCTATAGAGAAATGTTCACAATGTT
TGAACCGAAAACCAGACGTTTTAGAGATGCGAATTAAGGAATTGGAATTT
GAAAAAGCGCAACTGACGAAACGTGTCTCGGAGCAAGAGGTTTTGATTAA
GAAATTAGAATCAGAAAAAGAGTGCTATCAAAAGTTTACTTTTCAATTGA
AAGAAGTTACTCAACAGTTGCCTGATGAAGTACTGAGATCGTCGGCCAAT
TGGGACACGGAAATACCGCCATGTATCGCTCACCGAAGAAAGTGGAATTT
TTCAACGGGATACCCATTAAACAGGTGGCTTGTGGCGAAGATTTCACCGT
ATTCTTAAGTGATAGTGGAAACGTATACGCGTGTGGATCTGATTATTCTG
GTTGTATCGGCTGTGATGAGTCGCTTGGTGATAAAGTGTTAACTCCTCAT
CAAATAGAGACGTTCGATGGTAAATTCGTGAAACGAATAGCTTGTGGTGA
TTCTCACGTTGTTGCAATGACCGACCAAGGAGAAGTGTACGCGTGGGGTT
GTGGAGAGTATGGAAGATTAGGTCTTGGCCATGAGGACGACTGCAGTACG
CCACAGTTGGTGCCGCTACCCAAAAACTATTCCTCGTGTATCATTGATGT
AGCATGTGGGCGTGATAACACTTTCTTATTGACAACACAAGGACATTTAT
TGGCTTTTGGAAGTAACGAAGATAATAAGATGGCCTTGAACCAAACAGTG
CATTTGAAAGGCGGTGGCAAAAATAGAGAAATTGATTTCGTATATTATGT
CAGTAAGCCAACCCCTGTGAGAGCACTGAACAGTTATCGGTTAGTAGCGG
TGGCATCTGGCAAATCTCACTCTGCAGCTTTAGATGAGTATGGCAGACTG
CTGACTTTTGGTGCAAATAAATATGGTCAGTTAGGAGTCGGTGATTACAA
GCCGAGAATCTCGCCCTCTTTAGTTAGAGGTAGTTTGACCGGAAAGGAAG
TCATTTTGTGCGCATGTGGAGATGGCTTTACTGTCGTTGCAACGAAAGAT
AGTCAGATCTTCTCTTGGGGGTCAGCTAAAAACGGTCGCCTCGGAATACA
ACTTGCTGCTGGAAAATCTCTCTGCTCAACACCGAAACCTATTTTTGGTT
CACTTCACAAAGTTGCTAGTCTATCGTGTAGGCATTGGAATACTATCATT
CTAGCTGAGAAGCTGATCGACTCCAAGCTAATTCATACGAAGGAATTGAG
TATGACAGAGGAAGGTTTTGGCGGACAAGGTCGGAATTATAAAGCAGTTA
TTGGTGAAGAGCAAACATCGGCCAGTTTTCAATTCGATGATATTCCTTTT
GATAATGAGAGTGACGCCAAACCTAAACGCAAACTTGAGCGACAGGAATC
AACGCGAGAGGATAAATTGAGCGACGAAGATGATTCGATGCCACCGTGGC
TCGTGGATGAGTTACAAAATGCTGAAGTTATTCCTATGAAGGGAGGCGAG
AACGAAGACCGACCGGCGACGAAAAACGACGATGATAGCGATAATGAAGA
CTCGGTACCGGCTTGGTTAGCCGATGAAATGGAAAACGCCGAGTTTATCC
CGATGGATAACGAGAATGTGTTTGAACAACCGACTAAAGGGAGAAGTGTT
TCTGTTAGAGAAACTTTCCAATCTGTCAGAGCGTCTTCTATAGAGAAATG
TTCACAATGTTTGAACCGAAAACCAGACGTTTTAGAGATGCGAATTAAGG
AATTGGAATTTGAAAAAGCGCAACTGACGAAACGTGTCTCGGAGCAAGAG
GTTTTGATTAAGAAATTAGAATCAGAAAAAGAGTGCTATCAAAAGTTTAC
TTTTCAATTGAAAGAAGTTACTCAACAGTTGCCTGATGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323_pilon | genome | sc0000323_pilon:231416..234651 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1162-2820:1660 |
| Aaloc | 1-1158:3237 |
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