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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:700590..703908- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038835 ID=XLOC_038835|Name=XLOC_038835|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3319bp|location=Sequence derived from alignment at sc0000005_pilon:700590..703908- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAAGAAGATGATGATATTCAAAAGTAAGCTTTGTTTAAAAGTTTT
CAGTATCTTCCACACGATTTTTGATTAACAGTAACACAGATTCTCGGTTG
TATGTGAGGTTTAACATTTACCGTCAGTTATAAAACCATAGCTTTGACGT
GCACTACATCTTTTCACTACATTTCTTATGTGCTAGGATAGAGTAGAAGT
ATTCCATTCTATCAACCGTCAAACCAAATTCAAACTCAGTCCCTAGTTCA
TTTCTTATGATTCTGATAGCGCTTACATTTTAATCACATCTTTCAGGGGA
CCATCAGTAAAACCAAAGTGGTGAAAGTTGCTTTGAGTATAACATTTTCG
TCTAACAAAGGTTTTAACGCTCTAACTTGAAGACAATTTTTTTGAAAAAG
TTTTTTCCTTCTTCAGGTTTCTATTACTTGGTAGTGCTGAGTGTGTTGGT
GCAACAAGCGAAATGCTTCGACGAATGTTCGCCAGAGAATTACAAAACTT
TGGATGAAGAATGGAGATACCATGAATACACTTCAATGAAGTTCAACAAT
CAAGATGACACTCAATTAAAAGAAGGCTGGTATCGATTCACAAACAAAGC
TTTCAGAATGCTGGAGAAGGATGAAATGTTCTCTGATTTTGTTGTCAAGA
ATAGGGTAAGTCTTGCAAGATTTGTTTGTTTTGATTTGCAGATTTCCAAT
GATATTCACTTTTTCAGAGTTCTTACTGGATAACCATACTAGACGAATGA
TATTAAACGTCGAAAAGTTTCCTTACCAGTTAAACAGTCAGTAGTTTTCG
GTAATTTAATATTATTACTTTATTTCGTAGAAAGAATTCAGACCAAGTGG
AAGCGAGCCTTTCCAGAACTTCCGCTTCTCACCTTTTCCTCCGAGACTCT
ACACCAGGACCACTCCGCTGTACGTGGTGAGCGGAATACATCCGGACATC
AGCGGAGGTACGTTTACTTTTGAAATACTAATAGATTTTGTTGGTCGAGA
ATCATTCTAGATTCCTTCATTAGAGTTTCAGGATGAGATAAATGATATAC
TATATTTGAGGTTTGACCTAAGGAGCGATGGAGCTGAAGCAACCATCGTA
CATTTAACTTAGATAGCTTCAAGAGGCTTGCGAATACACCTTCGCATAAT
ACTACGATTTTCTATTACAGATCTGGTCAAGACTGAGGCTATCGAATGTT
ACTATGAGTCGCTGTTGAACAGCTATGGGCCTACACCTCAAAATGGTGCA
ATGTGTAGCCGAGAATCACCAGATAGAAACCAGTGCAGTTACAAAAGGTT
CTGTGTTAAAAGTGCAACAGTTGAGATCAAAATCCGACATTGTGGATCGT
TCTATGTTTATCATTTGAAACCTGTCCGAAAAATCAACAGACATAAATTT
TTCGAGAATCCGAAGAGTGGATTGTATTGTGGGACCAAAAAGACAAAGAT
GGTTAAACCTTCAGGTAAATGGAATTCTTCAAAAAATCTGGTCAGAAAGA
ATCACGATGAGGTGAAATAAACGTTGAGGTCGGACAACGGACGATTACCA
AAGAAATTTATTGAACTGAACTTTTCAATTATAAGTGATTTTGCAAGATC
TATGCTACATGTTTTTTTATCAGAATATACTCTGTAAGAATATTCATGAT
GAAATTGGCCAAAACAATAAGAATATGCTAAGAATATCACCATCATGGAA
TTTGGCATTTGAGAAAATTCCATTTCTAGAGGCATTTCAACTGTAAAATT
TGCCAATTATCTCCCATTAAGAAGGCTCAAAACTTTAACGTTTAATGTTA
TTTTATTCATCAGGTATGTGGTACATCTAGGACTTTCCTCAAAAAGTTAA
GAATAGAAAAATACTGTTTTTATAAAAAAGTGTATACGGACAAAAAATAG
ATATTTGCTTGACCATCTTTTTTCTCCTTTCCAACCCTTCAGCTCCTTGT
AAATGTCAACTATCTGAAGAGAATGAAGAAATCCTCAAATCTACAAAATG
CAACTTAAAAGATGGTAAGGACATTTGATTACTCATCGATTATCTTACGA
CGTGACATCAAACCAAATCTTTTTCAATGATATAGAGGCCCGGGGGGGCA
CTAGGTTTGCGGACTGACGGTATGTGCGGGCCAAAAATTGGCTTTTAAAA
TTGCACCCTTACAGTGCAGCAAAAATCAGTGAAAATCATACCCTTAGAGT
GCATTTTCCCCCAAATTTTCGATCCCTTTCGTGCAAAAAATGGTCAAAAT
TCTAGCATTTTTGGTCAAAATATCTAGATTTTTCAAGAATTTTCTGAAAT
TTCTACCCTTACAGTGCATCTCTAGTTTTTCCGACCCTTACAGTGCATTT
TAAACATATTGGAAAAGGTACCCTTAGGACCCGCACATACCCGTCGGTCC
TTTTGCCCAGCTGCCCCCCCCCCCGGGTATAGAGGTACTTTAAAAATCTG
GCTGAGAATTCACCCTCTTAAAGGTTTGGTTTTTAAATAAGAGTGACATT
GTTTGCTTACTCATCAATTTTAATTCACTAGCTTTTACACTCTTTAGATT
CTTCGCTCTTAATTTTATGATGATACTCAAGGAACCTCTTTTACCTCTGT
CCATATCTTAAATATCCCAATATCCATAATTCTCAAAGAAAATGAAAATT
GCGTATACTTTGAATTTTTTTTAAATAAAAGTAGTATTTTAGTGTTATAA
AAGCTGCCTACCTTATCGGCCAAAACTTAGTCGGCCCTAGGTGACTAAAC
TTTGGCTTAGTGACTAAAATTAGGGCCGACTAAAAATTTAGGCCAAATTA
AAAGTTTATAATTAATCTTTCCTTATTTTCAAGTATTTTAAGCTTTCTCC
TATTTTCCATCTGCTTGTAAATTTAGAAATGGCCCAAATTTTCAGTCTGT
CTTAATTATTAGTCGGCCCTTAGTGACTAAATTTTGACGAGGTGACTATA
ATTAGGGCCGACTAAGTTTTGGCCGATTAGGTATGTAGAAAATATTAAAC
ATTTTGCGGGAGACCTGTGACCGTTAGAGATCTCTGAGATGATATTTCCT
TTATTTTTGGTTCAATAGAACTGGACGAGGAAGGAGTGAAGGCATTCATT
CGATGTTTATTTGACGAGCAAACGGAACTGACACTTGCAGACCAACAAAG
TGCGACTTGTGTGAATAAACTTTGGAAGGCTGAACATGGACAAATGCATG
GCCAAACATACCCGATATCAGGTGTCAAGAAACAACAAACGAAATGCTAT
AATTTGAGACGCGAATTTAAAAATGCAATAAATATGAAGTTTGAAGTCAT
GAAACCATTGTTAGAACGC Coding sequence (CDS) from alignment at sc0000005_pilon:700590..703908- >XLOC_038835 ID=XLOC_038835|Name=XLOC_038835|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2022bp|location=Sequence derived from alignment at sc0000005_pilon:700590..703908- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAAGAAGATGATGATATTCAAAAATGGGAAAGAAGATGATGATAT
TCAAAAGTTTCTATTACTTGGTAGTGCTGAGTGTGTTGGTGCAACAAGCG
AAATGCTTCGACGAATGTTCGCCAGAGAATTACAAAACTTTGGATGAAGA
ATGGAGATACCATGAATACACTTCAATGAAGTTCAACAATCAAGATGACA
CTCAATTAAAAGAAGGCTGGTATCGATTCACAAACAAAGCTTTCAGAATG
CTGGAGAAGGATGAAATGTTCTCTGATTTTGTTGTCAAGAATAGGGTTTC
TATTACTTGGTAGTGCTGAGTGTGTTGGTGCAACAAGCGAAATGCTTCGA
CGAATGTTCGCCAGAGAATTACAAAACTTTGGATGAAGAATGGAGATACC
ATGAATACACTTCAATGAAGTTCAACAATCAAGATGACACTCAATTAAAA
GAAGGCTGGTATCGATTCACAAACAAAGCTTTCAGAATGCTGGAGAAGGA
TGAAATGTTCTCTGATTTTGTTGTCAAGAATAGGAAAGAATTCAGACCAA
GTGGAAGCGAGCCTTTCCAGAACTTCCGCTTCTCACCTTTTCCTCCGAGA
CTCTACACCAGGACCACTCCGCTGTACGTGGTGAGCGGAATACATCCGGA
CATCAGCGGAGAAAGAATTCAGACCAAGTGGAAGCGAGCCTTTCCAGAAC
TTCCGCTTCTCACCTTTTCCTCCGAGACTCTACACCAGGACCACTCCGCT
GTACGTGGTGAGCGGAATACATCCGGACATCAGCGGAGATCTGGTCAAGA
CTGAGGCTATCGAATGTTACTATGAGTCGCTGTTGAACAGCTATGGGCCT
ACACCTCAAAATGGTGCAATGTGTAGCCGAGAATCACCAGATAGAAACCA
GTGCAGTTACAAAAGGTTCTGTGTTAAAAGTGCAACAGTTGAGATCAAAA
TCCGACATTGTGGATCGTTCTATGTTTATCATTTGAAACCTGTCCGAAAA
ATCAACAGACATAAATTTTTCGAGAATCCGAAGAGTGGATTGTATTGTGG
GACCAAAAAGACAAAGATGGTTAAACCTTCAGATCTGGTCAAGACTGAGG
CTATCGAATGTTACTATGAGTCGCTGTTGAACAGCTATGGGCCTACACCT
CAAAATGGTGCAATGTGTAGCCGAGAATCACCAGATAGAAACCAGTGCAG
TTACAAAAGGTTCTGTGTTAAAAGTGCAACAGTTGAGATCAAAATCCGAC
ATTGTGGATCGTTCTATGTTTATCATTTGAAACCTGTCCGAAAAATCAAC
AGACATAAATTTTTCGAGAATCCGAAGAGTGGATTGTATTGTGGGACCAA
AAAGACAAAGATGGTTAAACCTTCAGCTCCTTGTAAATGTCAACTATCTG
AAGAGAATGAAGAAATCCTCAAATCTACAAAATGCAACTTAAAAGATGCT
CCTTGTAAATGTCAACTATCTGAAGAGAATGAAGAAATCCTCAAATCTAC
AAAATGCAACTTAAAAGATGAACTGGACGAGGAAGGAGTGAAGGCATTCA
TTCGATGTTTATTTGACGAGCAAACGGAACTGACACTTGCAGACCAACAA
AGTGCGACTTGTGTGAATAAACTTTGGAAGGCTGAACATGGACAAATGCA
TGGCCAAACATACCCGATATCAGGTGTCAAGAAACAACAAACGAAATGCT
ATAATTTGAGACGCGAATTTAAAAATGCAATAAATATGAAGTTTGAAGTC
ATGAAACCATTGTTAGAACGCAACTGGACGAGGAAGGAGTGAAGGCATTC
ATTCGATGTTTATTTGACGAGCAAACGGAACTGACACTTGCAGACCAACA
AAGTGCGACTTGTGTGAATAAACTTTGGAAGGCTGAACATGGACAAATGC
ATGGCCAAACATACCCGATATCAGGTGTCAAGAAACAACAAACGAAATGC
TATAATTTGAGACGCGAATTTAAAAATGCAATAAATATGAAGTTTGAAGT
CATGAAACCATTGTTAGAACGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:700590..703908 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 763-1011:250 |
| Aaloc | 691-759:1376 |
| Aaloc | 397-687:2148 |
| Aaloc | 268-393:2490 |
| Aaloc | 31-267:2902 |
| Aaloc | 1-27:3320 |
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