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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:736029..740874- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038832 ID=XLOC_038832|Name=XLOC_038832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4846bp|location=Sequence derived from alignment at sc0000005_pilon:736029..740874- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCAATCGACTCTCCAACGCGCAAGAGAAGTCAAGATAATGATCG
ATTTGAGGACTTGGAAGAATATTTGTCAACATTGAGAAACGAGGATCTAA
TCAATATTGTGAGAGAATGCTGGCCTACTTCCAAAGAAATTATTCTGAAA
TTAATTTCAAAGAAAAAGAAACTTGACGAAGAAGCAGCAACGGCCAAAAA
GTTGAGAATCGAAAAAGACAAGACAGATATTGTAGAAACAAACTGGATTT
TTACAGTATATGATCATCAAGTTATCAATATCAAAGAAGGTGTTATAAAA
CTTGGAATGTATCGTGAAAAAGGAAAAGACCTGACTTTGTCTAAAAATGG
GGAATGGAACGAAGAGGGAGAACTTGTGTTTAAAATCTATGATAATGGAT
ACTGCGATTGCTCAGGTAGTAACGAAGTCCTTACATTAAAAATAGAGAGA
GATGCCAACGAAACGAAAAAGAGAGTTCGACTTTCTGGTTATCTAGAATG
TTACTGTACCTTTGATCATGGCTTATGGCTGCTAAGAAAATTAGCGGTTT
GTGTAATTTACGATGCGCGATCCAACGATTCACGATGCACGATGCACGAT
CCATGCATATATTATGTTAATTATTCTAATTATGCATTTACAGGTTTTAG
TAATCACATATTTTAATTCCTTCTTTTGTATTCCTGGAAAACCAATGTAA
AGTATGCGTGTATATATTTTAACCTGAACAATCAAATCAAATCAGAACAT
GAACTTTTTTGCCCATGCTTTGAATTGAATATCTTGTAACCTTTTTGCTT
TCTTTATTTAAAAAAAAAACGTTTCTCCGATTAAACCAACCAAATGCATT
GGTTTGAGACAGGGTTATAAACAAAAATTTACAATGTTGTGGTAAAGTAG
GGAAGACGCTTTTTAATAAAGAGCGCGTGTCTAAACTCACCTTTTTTGAG
AAAGATCAAATGAATTAACTTGATCATCAAACAAAGAAAAATATCAAATA
AATAAACATTGTGGTCACACTAGAGATTTTACTTTTTATAAAATCGGATA
ACAATAGGTAGAAGCAAAATTCTTTTCAGTTACGATCTCAAATCAATTCC
GGTCTGAAAAGTTTTGAGTTTTTTCTTCTCTTGCTCAAGCCAGACACAAA
AGACTTTATTGTTTAAATTTTAAAAATTTTTCGAGGTGCCCCCGAGCTCC
TCTTTTCTGTTTCGAATTTTAAAACAATGGACCTCTCAGAAAAATGCAAA
ATGTTATCTGGTTGATTTCATTGTTTCCATAAAAGAAGTAGTGTATTATC
ATACAGAATATAATGGGATGGGTGTGGTGATATAAATAAACGTGAGAAGA
TTTCTCTCACACAAATCATTTCAAAGAAAGCTGTGCACTGTTTCTGTGTG
CAAAGTGTTGAGTTTGTGAAGCGAAGCAAAATGAATTATAACAATTATTG
TGGTCCAGGTTACAAACCTACGTATTATCCTGTACCAAGTCACCTTAACG
AAATGCCACCAATGGCATCACAACAAATGGTATCTTTACAAATGCCGCCG
ATGCAACCCTTTCCACCTCAGCAAATGGTACCTCCAATGTTTCCACAACA
AGTCGTTCCACACCAAGCTCCTCAAACACAACCTGAACCAAAGAAAATTC
GTTTCACCAAAACACAAAAACATATACTAATCACGCAATGGTGCGAAAAC
ATTTCAACGAAATTCAATCAAGTCGCTGTAACCAGGTTTGGCCAGACATC
GTGAAAAAAGTTTCAAAGCATGGACAACCGAAAAATCTAAATCAATGCAA
GCAAAAGATATGGGGAATGAAAGACAAATATCATAAATGCAAAAAGCTCA
TGAACGAATCAACTGGTGGAGCCGCTGTTAAAAAGTGTGAATATTTTGAT
GATATTGACAAAGTGTTATCCGACAGAGATGTTGAAAATCTACCTGAATT
TTTTGAAGTCGGCGCAGGAAACGAGTTAGAGCCTTCTGAGAACTTTGATG
TAACCACACCACCAGCAGTTGAGAAAGATGATGCGTCGGGCATTGAACCT
TGCAGTGCAAGTTCAGCTATCAAGAGAAAACTTATCGAAGAAAACGAGAC
ACAAGATGACTTAGATAGTTCACTAGAATATGTGAAACAGTTAGAAACTG
ACGTGCGTAAACATTCCGCCAAGAAAGTTCCAAAGAAAGAAAAACCGAAA
ACATTCCAGGAACAGCTTATCGAAATGCAAAAGGAGCAAATTAAAGTTTT
TGAGAGAAGTGAAGAAAACTTTCAAAAATTTCAACTATCAATGCACCAAA
AACAGCTTGAGGCTGAAGCCAAAGACAAAGAAAAAGAAAGAGAGTTTTTC
TTAAAATTTGGACAGATATTTGCCGGTAATAAAGACAATAACAACAACAA
CAAATAACTTTTAAGTTCAGAAAAATTCTTTTGTTAAAAACGGTATTATT
ACAGTAGTACGCAGTAGTATCTTTTGAAATTTTACATTGACACGAATTGG
CACTTGTCACTTCGATCATTTGTCACGGACAGTATTCTGGGAGCCCAGAT
TAGGATTAGGATTTTTATCATAGTTTTTCTTTTGACATGTCGTTTATTGA
TTTAAATAGTTGGTTAATGAGATACGAGAAGTATTTCCATTAGGATTTCG
ATCATAATTCTGCCGTCTTCTTTGTCTTGACTGTCTCTCTTGTCTCAAAA
TATATTCGAGAACACCATCCTCATCTGTATAAGTTTCATTGTTCATTTGA
CAAAAATTGTGTAGAGTGACGCAGGCGATTGTCACAGCAGCGACATTTTC
AATCCTATTATCAAGTCGTTTGAGTAAGATTCTCCATCGAGCTTTTAAGA
TCCCAAATGCTCTCTCGACATGAACCCGACCACTCGATAATTTTCGGTTA
AAAACACGTTGATCTCTTGTTAGCCCTGGTCCGAATTGGTGTGGTGTGAT
TAGCCATGATAGTAAGGGATAGGCACCGTCTCCGAGGACAAGGGGTCTTA
TTTCCGAATCATCGATTACGTCAATAGGTTTCGTCAAAATTTCTTGATTT
TCGGCCCTTCTAAAGAGTGAGGAGTTTCGAAGGTTTCTAGCGTCGTGACA
ACTACCTGGAAATCCCGTTGCAACATCTAAAAACATTAAATTTGCCCCAA
CTAACCCTTGTACTGATACTGTGTAGCACTGTTTCCTACTGTAATAGTCA
GCTTTCGATTCAACACTGGGAGCAGATATTGGGATGTGAGTTCCATCCAA
AGCGCCAACTACCTTGGGAAATTCGGTTTGGTAGTTCATCTTAAATTCTT
CTATCGCCTTAGCAGTATCTCTTCTTGTTTGAGGAAATTTGATAAACCTT
TGGGAGAGTCTCGTTAGTTCTAAACAAAATTCCTTTGTTATTTGTACTGC
CGTTGAGCTTCCAACGGCAAATGTTTTTGCGACAGTCCTAAAGGAGTTTC
CAGTTGCCAGCCTCCATAAAGCAATCGCTACTCTTTTTTCTATGGGTATT
GCTCTGCGTAACTGTGTGTCACGTTTTTCTAATCTTGGCCGAACAAGTGC
TACTAACGACAGAAAGGTCTCCCGTGACATTCGAAAATCGTTACGCCAAA
AATGATTAAAAATCTGATCTGCCTGCATACGCGAAAACCAAAACTCTTGT
CTGGGGTAAGCCCATAACGAACGTGCTCTACGAACTCTTAATTGTAGCAA
AGAAGTACGCATGATGGATGACAAAAAGAATCTTCTAGTTAACGAGCGAT
GATGGGATATTGCGTTTTTGAAACAAATTTTGCTAAAACGTCGTTTTTTA
TGCTTCTTTTGATAGTGCTTGAGAAGGAGCAGAAGTAGTGCTTTTGATTC
GGTGTCCATAATGTAAAAGCTCAAAAAGTTTGAATGAGTTTGTTTATTAA
TTTCCTGGTAAGAGAAAAACTAATAGAAAAAAGCACTATTGAAAAGCTCT
ATTGTTAAAAACCATTTTAAAATTTTTAAAATTTCATAGTGTGACTACTG
CAATTCAGTTGGTGAAATGCTTTTATAAGAACATGCCAAAAGTAATAATG
TAGCCAATGATTTCTTATTTACCTTATTCACTGTTCTTAAAAATCAATGA
ACGTACAAAAATGAGTATGTGTTTTAATAAATTTTTCGCACCAAAACTTT
TCTATGACGTCAAGGCTTTTTCTTTCAGTTTTTTTCTACACAGAAGATAT
AAGTTATTTTAATCATTCTGATTAAGGCCTGTTTCCATCGATCGCGCGAG
CGTGCACGCTAGGCCAAAATTCTTAAAATAGATTTGGCCGTAAACTCCGC
GCGATCAATGTTTGATTTCCATCAAGAAAGAGGTTGACTCGAACACAATC
TGTATGTTTACATTTTTTTGTTTACTCAGCAGTTTATCTCTTTCTTGATT
GGTTGAAAAATTATCAATTGGAATGTGCGCTCCTGTACGCTCAAAAAAGT
TGAAAATTTTCAGCGTAGAAAAGAGCACAAAAGCGTACAAGAGCGTACAC
ATTTTGTGTACAAGAAAGTTTAATTCGTGACGTCAATGTGCTATTTTAGG
AAATTTTGCCCTACCGTGCACGCTCGCGCGATCGATGGAAACAGGCCTTT
ATGATAAATTATTTCCCCTTCTTTTTTTATTTTTTTTTCGTTATTGTTAT
AGGATGTTTGTAGCTAGCATTATGAAAACTTATTCGTGCATAATTAGAAT
AATTAACATAATATATGCATGGATCGTGCATCGCGCATCGTGAATCGTTG
GATCGCGCATCGTAAATTACACAAACCGGAAAATTAGCATGTGACTGTGA
TGACATTGGCTACCCAGATGGTGAAGAAGAGCAAAATGAATTCTAA Coding sequence (CDS) from alignment at sc0000005_pilon:736029..740874- >XLOC_038832 ID=XLOC_038832|Name=XLOC_038832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1206bp|location=Sequence derived from alignment at sc0000005_pilon:736029..740874- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCAATCGACTCTCCAACGCGCAAGAGAAGTCAAGATAATGATCG
ATTTGAGGACTTGGAAGAATATTTGTCAACATTGAGAAACGAGGATCTAA
TCAATATTGTGAGAGAATGCTGGCCTACTTCCAAAGAAATTATTCTGAAA
TTAATTTCAAAGAAAAAGAAACTTGACGAAGAAGCAGCAACGGCCAAAAA
GTTGAGAATCGAAAAAGACAAGACAGATATTGTAGAAACAAACTGGATTT
TTACAGTATATGATCATCAAGTTATCAATATCAAAGAAGGTGTTATAAAA
CTTGGAATGTATCGTGAAAAAGGAAAAGACCTGACTTTGTCTAAAAATGG
GGAATGGAACGAAGAGGGAGAACTTGTGTTTAAAATCTATGATAATGGAT
ACTGCGATTGCTCAGGTAGTAACGAAGTCCTTACATTAAAAATAGAGAGA
GATGCCAACGAAACGAAAAAGAGAGTTCGACTTTCTGGTTATCTAGAATG
TTACTGTACCTTTGATCATGGCTTATGGCTGCTAAATGTCATCAATCGAC
TCTCCAACGCGCAAGAGAAGTCAAGATAATGATCGATTTGAGGACTTGGA
AGAATATTTGTCAACATTGAGAAACGAGGATCTAATCAATATTGTGAGAG
AATGCTGGCCTACTTCCAAAGAAATTATTCTGAAATTAATTTCAAAGAAA
AAGAAACTTGACGAAGAAGCAGCAACGGCCAAAAAGTTGAGAATCGAAAA
AGACAAGACAGATATTGTAGAAACAAACTGGATTTTTACAGTATATGATC
ATCAAGTTATCAATATCAAAGAAGGTGTTATAAAACTTGGAATGTATCGT
GAAAAAGGAAAAGACCTGACTTTGTCTAAAAATGGGGAATGGAACGAAGA
GGGAGAACTTGTGTTTAAAATCTATGATAATGGATACTGCGATTGCTCAG
GTAGTAACGAAGTCCTTACATTAAAAATAGAGAGAGATGCCAACGAAACG
AAAAAGAGAGTTCGACTTTCTGGTTATCTAGAATGTTACTGTACCTTTGA
TCATGGCTTATGGCTGCTAAGAAAATTAGCATGTGACTGTGATGACATTG
GCTACCCAGATGGTGAAGAAGAGCAAAATGAATTCTAAGAAAATTAGCAT
GTGACTGTGATGACATTGGCTACCCAGATGGTGAAGAAGAGCAAAATGAA
TTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:736029..740874 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-603:67 |
| Aaloc | 1-534:4847 |
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