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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1057823..1062809- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038825 ID=XLOC_038825|Name=XLOC_038825|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4987bp|location=Sequence derived from alignment at sc0000005_pilon:1057823..1062809- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTGGATTGTTCGTGGGCGGTATTTTGGTGACACTGACAATGATCAT
CCTAATCATCAAATCAATTATGAAATTGAAACGACCAAAAAGGGCCTGGG
AAGAGGACGAATCAAATAACTTTATTGAACAAACACAAAAATCATCAGAC
GAAAAAGACGGTGATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGGGA
ACATCATTTCCACTTACCACTTTCCTATGAAAAGATTCAGAACCAGAAAC
CATGGAAACACAGAGCTGTACCAACCGTCAGTGTTACTCAGGTAAGTCCT
CTCTGCTTTGACCTGGTAGTTTGATCAGAGATATCACGTACACCGCGGTA
CCACCCAGAGACGATAGATACCAATACACGAGTAAAAGTAACTACAGTTG
ACGCTCTGTAATTCAACGTTTTACTATTCGATACGCTCGATTATTCGATA
ATATTGAAAGACACCGTCAATAAGAAACTCTCATAAATGACGCACTTTTA
TTCGATACGTTCCATTTTTTCGATAATATTGAAAGACACCGTCAACAAGA
AACTGTCATAAACGACGCTCTACTATTCGATACGCTCCTTATTCGATGAA
AATTCTCCTTAAAAATCGAACTAAAGAGAGAGAGTCAACTGTAGTCTTTG
GTTGATGGCCTTTAGACTAAATATTCATAGTTGCTTTTTCTCACATACAG
CATTCTATAAAAACCTTTGGCACATTTTAGCACAGTCCCACATCAGCGAG
TGCGCCAACAAACCTTTTGCCTTCATCCTCCGCTGCTAAACATCATGGAG
TATTGAATCAACGGAGAAGATCAATCACCAACCAAATGATGGCAGACCTT
CACAAACACGGCAAACATGGTATGGTGCAATCCTTTTGATACATCACTGA
CCATTTTCTCTTTGTCTATTAATTGTACGCTTTACAGGTGTAATTTCGCT
AAAAATCGAATCGACGCTAAGTCCTAGCGGATAGGTTGTCCGCTACCAAT
CCTTTTTGTCTAACTCAGCTGGCACATAACGTTGTTTTAACGTTTAAATA
ACGTTCACAACGTCATATAACGTTAAATGAACGTTGAAACAACGTTGTGT
GCCAGCTGGGAAATGTCATTGCCCCGGGTCTGTATCACATTCATAATGGC
AGATATGAGCCGGAATATGACCTTTTTTGGATCCGTCGGTAATTAAATCT
TAGATCAAAGCTGAAGAACCCATTCTATTCGAACCATTCTATTTTCAAGG
CAAAAGTCTCCAACCACTCTTCGGTGGTCACTCTACTTATAAGAGGAAAA
AATTTGACCAGGTAATATGGGGCACCAGGCACCACGTTAGCGTTGAAAAG
ATTAGAACTGGTTTTTATTCTAAAAAATCGCAATGGTTTTCATACTAACT
AAGGAACATTTCGAAGATTGCTTTTCTTTTTCGTTTTCCAGTGATGTATT
CATCTTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATAT
CATTTAGGACCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCGT
TGAACATAACTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAACG
TACACGGAATCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAAA
ACACATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTTT
CTTCGAAGCTGAATACATACGACATGAACGAAAACTAGTTCTAAACATTA
TAAAATGCTCTGAATTAAAAATGAAGACGGATATACACCACTCCAACACT
TTTGTGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAAA
AATACGACGGGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTCA
CCGACCTCGATCAAGTTCAATTACAAAGACATAAATTGAGACTAAAAGTG
TATAACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATAT
TGCGTTGATTACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATC
TGTTCGTCAAAAAGTCTGAGGTAAATACTTTTTTCTGATTCAATACATTG
TGTTTCAATACTCCTGTCTCCCTACAGCGATTTTAGGAAAATTAGAGTTT
ATACTAAATGCAATATAAACATAATATGAGGGTCCCATCCCTGTTTGACA
ACACAGTGTCTCCTGGGCCTGGGCTTTTCAAAGAAAAAATGTAAACTCTA
AAGATTGTCTATGCAATTCAAGGTTTTCTAATCTTTCCCCTTATGAATGG
AAATGCACTTAAAGTTGGAGGGTAGGACTTTTTCTTTACACTGATTAGTT
TGTATTTTGACAAAAACAAAAGATATGAAGATAATAAATTTGATACGTAA
TAGTTATCGGACATACCAAAAGTTTATATTCTATCTTGGTCCTTTCATTT
TAGAACGCAAACGCTTCAATGATGATCTCAATAAGACACGAAGCAGCTCT
TTCCAAACTACAAGTCAATATTGAAGAAGCCAAAAATCTTCCAAAGGCTC
ATCTGACTGGCCTTAACCCTGGTAAAGCTTTTTAACTTATTTTGGTTCTT
CTTCGATGCCAGTTTCTTCGAGAATCCGTTTTAGTCCCTTTAAGATTGTT
TAAGGAGTGAGGTAGTAGGTACACGTCATCCTGCAAACCTAGCGACCTGG
GCCCCAATGCTACATTATTTGAACTGCACTCGTTAACAAATTTCCACCTT
TCGATTATTGAACTGATAAACAACATACGTTCGAGAATCTTTGGAAATAA
ACAGTGTGTTAGTATGCCAAGTCAATGTTAGTGGTAGAAAGAGATATTCT
CTTTCCCCAGTTGGGCACACAACGTAGCCTATACTAGACGTCACCCGCGT
TTTTTTACGCAATTAATGTCTATTCCACTTTGCGACTTTTTCGAATGTTT
TGAGCCTGGGTTTTCGGGCTCTAAACATTCGATTTTTTGACGTCACTTTT
AACTTTCGAAGCTCCTGCAGTAGCAAAATAATCGAATTTGCGTCAAATAT
GCCGGCCATTCTGTAGCAATAATCAATCTTTCGAATATTTAGTTCAATCC
AATCCTTAATGCCGATATTTAGTTCAATCCAATTCCCATATTTAGTTCAA
TCTCTATATTTCATTCAATCCAATCCCTATATTTCATTCAATCCAATCCC
TATATTTCATTCAATCCAATCCCTATATTTCATTCAATCCAATCCCTATA
TTTTATTCAATCCAATCCCCATATTTAGTTCAATCCCTGTATTTCATTCA
ATCCAATCCCGATATTTTATTCAATCCAATCCCGATATTTTATTCAATCC
AATCCCGATATTTTATTCAATCCAATCCCGATTTTTCATTCAATCCAATC
CCGATATTTCATTCAATCTTTTTTTTCAATCTTTTTTTTAATTCAATCTT
TTTTCATTCAATCTTTTTTTTATTCAATCTTTTTTTTAATTCAATCTTTT
TTTTATTCAATCTTTTTTTTTCAATCTTTTTTTTTTATTCAATCTTTTTT
TTTATTCAATCTTTTTTTTCATTCAATCTTCCTGGGTACGAGCGTAATTA
TTATCTCCCTAATGTAGTTTCCACATGGTTTGAAGTGATTTAAGACGTAA
AAGTTTAGTAGGATCTGACTAAAGTATGTTAGGAGATCGCACCAGACTTA
GAGCATCCGGTGGTGCTGGTGCTTCTTCTGTTGTTAGTGAAGAAGCTGGT
AGCGGTGTTATTTCTGAAGATGATGGAGAACCAATGATTCGTCAGAAGAT
TTTGACTGCCCTGAAGGACAAATTTCCACTTTTAGGGCAGAATGACTTTG
ATTTTGTCGAGGTACGACGTAAAGAGATAACAAAAATGAGCTTGGCAACA
GGCATGGAGTATAGTTTCAATGTAGTTAAGAAACTTGCCGGTCAAGGACA
GCTATATGTGCAAGTGCAGGATTACTTGTGCCCAGTAAGATTGAATTTAA
AAAAAGATTGAATAAAAAAAAGATTGAATGAAAAAAAAGATTGAATAAAA
AAAAAGATTGAATAAAAAAAAAGATTGAATAAAAAAAAGATTGAATAAAA
AAAAAGATTGAATAAAAAAAAAAGTTGAATAAAAAAAAGATTGAATAAAA
AAAAAAGATTGAATAAAAAAAAAAGATTGAATGAAAAAAAGATTGAATAA
AAAAAAAGATTGAATGAAAAAAAAGATTGAATAAAAATAGATTGAATGAA
ATATCGGGATTGGATTGAATAAAATATCGGGATTGGATTGAACGAAATAT
AGAGATTGAACTAAATATGGGGATTGGATTGAACTAAATATCGGCATTAA
GGATTGGATTGAACTAAATATTCGAAAGATTGAATATTGCTACAGAATGG
CCGGCATAGTCAAAGCACTTGAAAGGCTTCTATTTTTCGAAAATCGTCAA
AGTGGAACTCACTAAGAAACGAGATGAAAAATCCCGGTTTTTAGTGAGGT
GCTCGCTACACACAACGTTGCTTCGACGTTTATTCAACGTTCACAACGTT
AGATGAACATTGAAACAACGTTGTCTGTCAGCTGGTTCTGCATTTAAAGG
ATATCCTCCAAGAACACCAAGATAGGCTTAATTGTTTTCTTTATATTTTT
CAACATTATAGACCCATACGTGATTGTGAAGTTATACAAAGGAGATTCGT
GCGAAAAGAAAGAAACGTTACACTTACGGAACACGCGTGCTCCCAAATTC
CACGAAACATTCCAATTCCAACTAGCAACAGATTTCGAATATCCTTTAAG
CGTTTTCTCATTGGTTGTAACTATAGCAAATAAAGTTCTGATTGGTCGAG
ACGAAGTATTAGGTCACGTGATTTTTAGCCTGGATTCGCCTCAACATTCA
GCCATCACACACTGGAGGAATGTGCAAACAGAACCTCATAAAACTCACTC
ACGATGGCATTCCTTGATTGACCCGGAAGATGTTTAG Coding sequence (CDS) from alignment at sc0000005_pilon:1057823..1062809- >XLOC_038825 ID=XLOC_038825|Name=XLOC_038825|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3006bp|location=Sequence derived from alignment at sc0000005_pilon:1057823..1062809- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTGGATTGTTCGTGGGCGGTATTTTGGTGACACTGACAATGATCAT
CCTAATCATCAAATCAATTATGAAATTGAAACGACCAAAAAGGGCCTGGG
AAGAGGACGAATCAAATAACTTTATTGAACAAACACAAAAATCATCAGAC
GAAAAAGACGGTGATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGGGA
ACATCATTTCCACTTACCACTTTCCTATGAAAAGATTCAGAACCAGAAAC
CATGGAAACACAGAGCTGTACCAACCGTCAGTGTTACTCAGGAAATTGGA
TTGTTCGTGGGCGGTATTTTGGTGACACTGACAATGATCATCCTAATCAT
CAAATCAATTATGAAATTGAAACGACCAAAAAGGGCCTGGGAAGAGGACG
AATCAAATAACTTTATTGAACAAACACAAAAATCATCAGACGAAAAAGAC
GGTGATGGTAAAGGAAATCGTCCCAAAATCTTCATGAGGGAACATCATTT
CCACTTACCACTTTCCTATGAAAAGATTCAGAACCAGAAACCATGGAAAC
ACAGAGCTGTACCAACCGTCAGTGTTACTCAGCACAGTCCCACATCAGCG
AGTGCGCCAACAAACCTTTTGCCTTCATCCTCCGCTGCTAAACATCATGG
AGTATTGAATCAACGGAGAAGATCAATCACCAACCAAATGATGGCAGACC
TTCACAAACACGGCAAACATGCACAGTCCCACATCAGCGAGTGCGCCAAC
AAACCTTTTGCCTTCATCCTCCGCTGCTAAACATCATGGAGTATTGAATC
AACGGAGAAGATCAATCACCAACCAAATGATGGCAGACCTTCACAAACAC
GGCAAACATGTGATGTATTCATCTTTCCACAGTGGAGCAGAATCAGGTGG
TGATTCGGGAAGTGAATATCATTTAGGACCAAATTTCAGCGACGACGGCT
CCTTGACCGCTTCAAGCGTTGAACATAACTCAGCTGATGATGGAAAAGCA
CATTATTTAGATTCAAACGTACACGGAATCAAGAAACGTGTTACTCGCAC
AAGACGTCTCGGACGCAAAACACATCACAGTCCTGTTAAACCTTCGTTCA
AGAAAACTGGCAAACTTTTCTTCGAAGCTGAATACATACGACATGAACGA
AAACTAGTTCTAAACATTATAAAATGCTCTGAATTAAAAATGAAGACGGA
TATACACCACTCCAACACTTTTGTGAGAGCTTATTTGGTACCCGGCAAAA
TTCAAAGACAGCAGACAAAAATACGACGGGAAACTTACGAGCCGATTTTC
AATGAATCTTTAGTGTTCACCGACCTCGATCAAGTTCAATTACAAAGACA
TAAATTGAGACTAAAAGTGTATAACCATTCGAAATTGAAGAAACACGATT
TGATAGGCGAGGTGGATATTGCGTTGATTACTCTGAATACTGATGCAAAA
GAAACTTTTGATGCTGATCTGTTCGTCAAAAAGTCTGAGTGATGTATTCA
TCTTTCCACAGTGGAGCAGAATCAGGTGGTGATTCGGGAAGTGAATATCA
TTTAGGACCAAATTTCAGCGACGACGGCTCCTTGACCGCTTCAAGCGTTG
AACATAACTCAGCTGATGATGGAAAAGCACATTATTTAGATTCAAACGTA
CACGGAATCAAGAAACGTGTTACTCGCACAAGACGTCTCGGACGCAAAAC
ACATCACAGTCCTGTTAAACCTTCGTTCAAGAAAACTGGCAAACTTTTCT
TCGAAGCTGAATACATACGACATGAACGAAAACTAGTTCTAAACATTATA
AAATGCTCTGAATTAAAAATGAAGACGGATATACACCACTCCAACACTTT
TGTGAGAGCTTATTTGGTACCCGGCAAAATTCAAAGACAGCAGACAAAAA
TACGACGGGAAACTTACGAGCCGATTTTCAATGAATCTTTAGTGTTCACC
GACCTCGATCAAGTTCAATTACAAAGACATAAATTGAGACTAAAAGTGTA
TAACCATTCGAAATTGAAGAAACACGATTTGATAGGCGAGGTGGATATTG
CGTTGATTACTCTGAATACTGATGCAAAAGAAACTTTTGATGCTGATCTG
TTCGTCAAAAAGTCTGAGAACGCAAACGCTTCAATGATGATCTCAATAAG
ACACGAAGCAGCTCTTTCCAAACTACAAGTCAATATTGAAGAAGCCAAAA
ATCTTCCAAAGGCTCATCTGACTGGCCTTAACCCTGAACGCAAACGCTTC
AATGATGATCTCAATAAGACACGAAGCAGCTCTTTCCAAACTACAAGTCA
ATATTGAAGAAGCCAAAAATCTTCCAAAGGCTCATCTGACTGGCCTTAAC
CCTGACCCATACGTGATTGTGAAGTTATACAAAGGAGATTCGTGCGAAAA
GAAAGAAACGTTACACTTACGGAACACGCGTGCTCCCAAATTCCACGAAA
CATTCCAATTCCAACTAGCAACAGATTTCGAATATCCTTTAAGCGTTTTC
TCATTGGTTGTAACTATAGCAAATAAAGTTCTGATTGGTCGAGACGAAGT
ATTAGGTCACGTGATTTTTAGCCTGGATTCGCCTCAACATTCAGCCATCA
CACACTGGAGGAATGTGCAAACAGAACCTCATAAAACTCACTCACGATGG
CATTCCTTGATTGACCCGGAAGATGTTTAGACCCATACGTGATTGTGAAG
TTATACAAAGGAGATTCGTGCGAAAAGAAAGAAACGTTACACTTACGGAA
CACGCGTGCTCCCAAATTCCACGAAACATTCCAATTCCAACTAGCAACAG
ATTTCGAATATCCTTTAAGCGTTTTCTCATTGGTTGTAACTATAGCAAAT
AAAGTTCTGATTGGTCGAGACGAAGTATTAGGTCACGTGATTTTTAGCCT
GGATTCGCCTCAACATTCAGCCATCACACACTGGAGGAATGTGCAAACAG
AACCTCATAAAACTCACTCACGATGGCATTCCTTGATTGACCCGGAAGAT
GTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1057823..1062809 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1192-1515:325 |
| Aaloc | 1072-1188:2535 |
| Aaloc | 445-1071:3545 |
| Aaloc | 304-441:4258 |
| Aaloc | 13-303:4988 |
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