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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1257587..1262984- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038821 ID=XLOC_038821|Name=XLOC_038821|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5398bp|location=Sequence derived from alignment at sc0000005_pilon:1257587..1262984- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTGCGTGCCAAAGAAATTCATATTTAAAAGAATTGGTTTCAAA
AGTGGTGACATGTACACAAGTGAAAAATGGATACGAAGTTATTCTCAATG
ATACTGTCTTCTTCCCTGAAGGTGGTGGCCAGGTATGTTTTTTGATCTCA
TTTGGTCTTGGTGTTTTATATTTCAGTCGTTTTCATTGCATAAGATCAAA
TAATTTTAATGCAGTCATTAAAAATAACACGTGCCGTGTTTTTGTTCTTT
AATTTTTTTCGGTGAAACAAATGCCGGTGATTTCCATGTTTCTCAAAGTA
TCATGGAATTGCGTTGACATTAAAATTTTAATTGTTTATAATTGTTTTAT
TCATCTCTTGAGACTTTTCATTTTATGTCTCAACAGATACGGTTTTCTAG
GGAAAAAAAAAAATGTTTTCTTAGGTTATTCATTTGCAATTTGTTTTAGA
TGAGGAAGGAGTGTTTGTAGATATGTTGATAAAAAATTTATTTTTTAAAC
GGATTTTTAATTCTTGTTTTTATTGATTTTAGACCTGAGGATGATCGTAA
GATCGAAATATATATAGTCACAAAAATAAAATGTCACCATTGTTGGTTCA
TTTTGAATATCTTCTCAAAGTATCATTATTTTATTTTTACTTTTTTAGCC
GGATGACCACGGAAAGGTTAGTTGATAGTTCTATTTAATTTTTCAAAAAG
TTTGCCTCCTTTTCTCCTTGAGTCAGAGAGAAACAAACAAGTGTTCTTTT
CAACTTTAAGAATATGTCAAAGACTAAAATATACTCCCAACATTACGTTT
CCGAAGCTCTACATCCTTTCATTGTTATTACTTTCTTGTAAATTAAAAGA
ATCTTTCACGTATATAAACTTCCGTGAATTGCCTTGTTACGAATGACATT
AACTTTCGATAAAGAGACCGAAAATCGAAATGGCGAATGTTCTAAATTTG
ATTAATCCTGTACACCTTTTTTCAAACATACAAAATGTTCATGTTTCAGA
TCGGAGATGTGAACGTATCACGAGTGATAAGACGTGGTCCGAAAGCCATT
CATGTGACGGATGGACCTTTGAGGGAGGGAGACGAATTGAAATGTTCGAT
TGATTGGAAACGAAGGTTTGATCATATGCAACAACACTCAGGTATTTTTT
AATCATTTTATTGCAAGGAGTGGTCAAGTGGTAATGAAATCAATAATTGT
AACTTTTTTTGAAAAGAACTCAGCGAAAATCTTACTTCAGTTAAAATCTC
TCACGGACTGCTCATCTTGTGGCTGTCGGTGGATTTGGAGTAAGGGAGTC
TATCCTCTTTTCTATTTGTGCTATACCTGGAAGATCGAATGCTGAGGTGG
AGCACGACACCTACTCTCAGCTCCCGGTTACTTATAGCCTGAATTGCAGA
CCTATATAGACATACTTCTATCCATAAGAAACTCTTTTCGCTAGAGGATG
AGCAGCCTAAGAAACTTACCGCCCATACCAGATTACTCAATTTAAGCTGC
TCATTCGCTAGTAACTAGGGATCGAACCCACAACCCTTATTTGGTAGGCC
AATCAATGTTCTACTGACTGAGCTACCAGGCCAATAATTGCAGATTGATT
GATCCTCACTATAAGGGTTTTCAAAAGGCTTGAAATTATATATCATTACA
TTCTCTTTTACTTCAGGTCAACACCTGTTGTCAGCAGTTTTGGATGCAAA
ATTTGGTTTCAAGACAACTTCTTGGTAATAATTGATATGAAAACGAATCT
TTTCCATTTTCATGTCCATTTTTCAAGATTTTAAGTTGCTAATAATTTGA
GGAACTGTAAAAACAAAAACAAGCAAAACTGCTGTGAAAGCCCTCACCAT
ATCAATGTCTAAAGATAAAAATTTCCTCTCTCTTAAAGGGACCTTGGTAA
AAGTGTATCACACGTGGAGTTGAACACACCGAAAATCAGTTCGAAACAGA
TGAGTGAGGTTGAAGATGAATGTAATGAACGAATAAGAAATGCAAAAAAT
GTTCAAGTTCATTATCTCACTAAAGAGCAAGCTATGGACCTTGAAGAGGT
TTGTTTCTAGCTATACTTTCCATCTCCACATAACTTTCTAGTTAAGAGCC
TTCCTAGGCCAAGCCCTAATCTCATAACAGATCATACGTGCTAAATATTA
ATTTACAACCGCGTTACTTTTTGCCTGAAAACGAAAGCACAAGGTGCAGA
TTTTGGCGCGATTTTTTAAAGTCTAGATTTTCTTTGTTCTTCTATAGGTC
AAAACGCGTGGACTACCTGATGACGTCATCGAACCTATAAGGGTCATCGA
AATTCATGGTAATTTTAATACATGGCAATATTTTGATCCTTAATATCTTG
TTTCATTTGCTTCTAAAAGTTGCCTGAATCTTATTACCAAGAATGTTATT
TCTCGACTTAAATTTCTAAAAGAGCGTCTTGGAAACTGTTAGTTTGATCA
TTATATTGTAACTATTGTCCTTCTCTTAGGTGTGGAAAAGAATATGTGTT
GTGGCACTCATGTAGAAAACTTAAGTGAGTTGCAGGTCTGTACCATCAAT
ATTTTTCTTATCGGCCCTTTTAACGCCCGCCCTTGTTACGCCAGTGGCGA
AAAAATACCGCTGATAAGGTCTGGCGAAAAAAGGGCCGATATACGAGACT
TATCATATCGAATAGCATTTATTGAAAAAAAGTACCCTTGAGCTACGGTG
CACGATGATAGCAGCTTGTAGCAACAATTTTCCCATTGATGATGATAGAT
AATCAAATGTCTTATTAACCTTTTAGATGATCAAATTACTTCACACAGAA
TCGATGAGAGGCGGGATTCGCGTTTTCTTTTTGGTGGGAGACCGAGTGTT
GAATAAAGTTGCCATTGGTTACGATGTGGAAAAGAAACTGACAAAGCTAT
TGAGGTAGGTTTATGTTTTTGAAATTTGTAGTGAAAGGAGGTGAGATCTT
TGATTAACTCAGTATGAAAAGTTTTCTCAAATATTGGAAAGGTCCAGCTT
TAATTCGTTATATCTCCGGAATTAGAAGAAATTAGAAGCTTGTTCATAGC
TCTTTAAAAAACTAAGAGCCTTCTCGTTTTTTTGGGGCGCCTTCGGGTGT
CGCTTTAAAGAAGAAGAGCTGGATGAACGGTGGTCGAGGGGTTGCCGTGC
ACGGAACTGACTGGGTTGATGGAAAGGTGCGCGGTGGTAAACTTCAAATT
AATTCTCTAGAAGACAGAATCTAGTAAAACAGAACCAAATTTTGCTACTT
TTAACTCACTCTTTGGACGTAATATGCTGAAAGAACGGTCAGAATCTCAA
AAAAATGTTATCGCTTTTTTGCATTTCACTCAATAATTTCGATGGCAAAA
GAGAGTGAAACACTTCTTTCTGTCGAACCACGAAATACAATTCGTCGAAT
TTCCACAATGGAAGTCTCAAATTCAAACTGGGCGTTACAGGAGGGCTTCG
GTTCGCCTTCTTTAACACCCCATGTCGGATATATCATTTATCGGTCTTGA
AAGGGTCAAAGTAAAATGAAGCAAATTACTCAAACCAAAACTTTTCATCA
AAATGGCATCTTTTTTATTTCAGCTGCGGCATTGATGAACATAGTGATTC
TGTTGAAAAGTTGAAAGGGAATTTGAGGGTCTCACAAAAGGTAAGCAACT
TTCTCATTTCATAGGCATAACACAGCATAATCAGGCTTGGTATTTGGTTT
GATAGCCTTGGGGTACTAGGTTTTCGAGGTGACAGGTATTGTCCGAGCCT
AATGAGTCTCAGAATGCCTAAAAACTTAGAAACATCTAAGAAACATGCTG
AGGCTGAGAATGAGAAAATAACATTTTTTAATTCGATTTTTTTAAGAACC
TTCCAATCAAAACAAATGTTTTTTCTTCTTTGCATGAAAATAGGCTGATT
ATGTCGAAAAGTTTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCC
GATTTCTTAAGAAGCTCCCCATCTGGAATCTAGTTCTTCTGAAAATATTC
GGAGTTTATTATCATACACTTCGTGATGAGTTGGGTCATTATGGAATCAT
TATTGATAAAATGGCGATGATATTTTTTCTTTTCTTCAGTCGAACAAGAA
TTATTTGAAGGAGCTCGGGAAATTCGAAGCCAAAGAACATTCACTGAAAG
CCAAAGAAACGTCCTATATTTTCCACTTCAGGTAAGTTGTGTTGTTTCAA
TTTCGAACTTCAGACAACAGGATTGAATCTTGTAGCCAACTTAGACAAAC
TTCGTCAGAGAGAACATCCGTCAGAGAACTTCTCCAACTGCAAAAGTTAA
CATTGACTAAAATAAATCGATAGCTTTTATCAAATTTATTCAGTTAGGAC
GAAAAAAACTTTTTGACCAAAACATTCGTCCACTTTAGACAGTGTGACAA
CCAGGATTCAACTGAAATACTGATACAGAGGTGTAAAAGAGATACATGGA
TAAACGAAAGGGGTATTACAGCCAGGACATTTCGGAGCTTTAGACGATAA
TTTATCGGGGACTAAAGAATGCCATTTGTATTTATAATTTTTCAGGGAAG
ACGCCGATATGGATTACATTTTCTCCTTTCTCAACGGACTTGCAGAAGAA
AGCAAGGTACTATGCTTCTTTGCATCCTTTCCATGTGGCAATAGATGCTT
TATTGTGTTTCCGGCAGTCAGAAAAATTTTGAATATTGGTTTTGAAGGGA
AAAAATCACGTTGAAAAATGCTCCGTTAGAAAGTTAATCGTAAATTATTG
ATATCGCTATCGTTCATATTTCAGTCGTTTTTTGACTTGCTTTCTGTAAG
TGTCTTAACTGATAGAATTTCAGCCTTCGTTGAGCATACTTTCAATTTCA
AATGAACCAATTATCTCTTTCTCGTTTCATGCTAACAGGACTGGATTGTT
TTCGTGAGTGCAGGAACAGTGAAGAATGGTGGACAATTTGTTTTACGAGG
ACCTGAACAAAAAATCGCAAAAATTTCTAGCGAGTAAGTCTGAACAAAAT
TCTTAAAAAAGTAAATTTGGCCTTCGAGTGAAAAAGTTGCATTTTTGCTG
TTCACAATTTTACTGCTTGTAATATTTATAACCCTTTCGAAGATCCATTA
ACGAAAACACCTTAAAAGGCCAACAATTCCAATATCTTTAATTTGGCTCA
AACGATGGTGCCTTTTTTCAAGGACCCTTTTTAGCAGCAACTTTCAGAAG
ATTTTCTATGCCAAACACGATATATCACCTTATTTGTTTTAGTTCGTGTC
CTTTAAAATCATTTCATTTTTCAGGATTGTAAAAACGATTGAAGGTAAAG
GTGGTGGAAAGAAAGGACAATTCCAAGGCAAAGCCAACTCTTTCAAAAAA
GTTGATGAAGTCGAGAACATCATCCAAGGAGCCGTCAATGAATCGTGA Coding sequence (CDS) from alignment at sc0000005_pilon:1257587..1262984- >XLOC_038821 ID=XLOC_038821|Name=XLOC_038821|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000005_pilon:1257587..1262984- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTGCGTGCCAAAGAAATTCATATTTAAAAGAATTGGTTTCAAA
AGTGGTGACATGTACACAAGTGAAAAATGGATACGAAGTTATTCTCAATG
ATACTGTCTTCTTCCCTGAAGGTGGTGGCCAGATGGCATTTGCGTGCCAA
AGAAATTCATATTTAAAAGAATTGGTTTCAAAAGTGGTGACATGTACACA
AGTGAAAAATGGATACGAAGTTATTCTCAATGATACTGTCTTCTTCCCTG
AAGGTGGTGGCCAGCCGGATGACCACGGAAAGCCGGATGACCACGGAAAG
ATCGGAGATGTGAACGTATCACGAGTGATAAGACGTGGTCCGAAAGCCAT
TCATGTGACGGATGGACCTTTGAGGGAGGGAGACGAATTGAAATGTTCGA
TTGATTGGAAACGAAGGTTTGATCATATGCAACAACACTCAGATCGGAGA
TGTGAACGTATCACGAGTGATAAGACGTGGTCCGAAAGCCATTCATGTGA
CGGATGGACCTTTGAGGGAGGGAGACGAATTGAAATGTTCGATTGATTGG
AAACGAAGGTTTGATCATATGCAACAACACTCAGGTCAACACCTGTTGTC
AGCAGTTTTGGATGCAAAATTTGGTTTCAAGACAACTTCTTGGTCAACAC
CTGTTGTCAGCAGTTTTGGATGCAAAATTTGGTTTCAAGACAACTTCTTG
GGACCTTGGTAAAAGTGTATCACACGTGGAGTTGAACACACCGAAAATCA
GTTCGAAACAGATGAGTGAGGTTGAAGATGAATGTAATGAACGAATAAGA
AATGCAAAAAATGTTCAAGTTCATTATCTCACTAAAGAGCAAGCTATGGA
CCTTGAAGAGGGACCTTGGTAAAAGTGTATCACACGTGGAGTTGAACACA
CCGAAAATCAGTTCGAAACAGATGAGTGAGGTTGAAGATGAATGTAATGA
ACGAATAAGAAATGCAAAAAATGTTCAAGTTCATTATCTCACTAAAGAGC
AAGCTATGGACCTTGAAGAGGTCAAAACGCGTGGACTACCTGATGACGTC
ATCGAACCTATAAGGGTCATCGAAATTCATGGTCAAAACGCGTGGACTAC
CTGATGACGTCATCGAACCTATAAGGGTCATCGAAATTCATGGTGTGGAA
AAGAATATGTGTTGTGGCACTCATGTAGAAAACTTAAGTGAGTTGCAGGT
GTGGAAAAGAATATGTGTTGTGGCACTCATGTAGAAAACTTAAGTGAGTT
GCAGATGATCAAATTACTTCACACAGAATCGATGAGAGGCGGGATTCGCG
TTTTCTTTTTGGTGGGAGACCGAGTGTTGAATAAAGTTGCCATTGGTTAC
GATGTGGAAAAGAAACTGACAAAGCTATTGAGATGATCAAATTACTTCAC
ACAGAATCGATGAGAGGCGGGATTCGCGTTTTCTTTTTGGTGGGAGACCG
AGTGTTGAATAAAGTTGCCATTGGTTACGATGTGGAAAAGAAACTGACAA
AGCTATTGAGCTGCGGCATTGATGAACATAGTGATTCTGTTGAAAAGTTG
AAAGGGAATTTGAGGGTCTCACAAAAGCTGCGGCATTGATGAACATAGTG
ATTCTGTTGAAAAGTTGAAAGGGAATTTGAGGGTCTCACAAAAGTCGAAC
AAGAATTATTTGAAGGAGCTCGGGAAATTCGAAGCCAAAGAACATTCACT
GAAAGCCAAAGAAACGTCCTATATTTTCCACTTCAGTCGAACAAGAATTA
TTTGAAGGAGCTCGGGAAATTCGAAGCCAAAGAACATTCACTGAAAGCCA
AAGAAACGTCCTATATTTTCCACTTCAGGGAAGACGCCGATATGGATTAC
ATTTTCTCCTTTCTCAACGGACTTGCAGAAGAAAGCAAGGGAAGACGCCG
ATATGGATTACATTTTCTCCTTTCTCAACGGACTTGCAGAAGAAAGCAAG
GACTGGATTGTTTTCGTGAGTGCAGGAACAGTGAAGAATGGTGGACAATT
TGTTTTACGAGGACCTGAACAAAAAATCGCAAAAATTTCTAGCGAGACTG
GATTGTTTTCGTGAGTGCAGGAACAGTGAAGAATGGTGGACAATTTGTTT
TACGAGGACCTGAACAAAAAATCGCAAAAATTTCTAGCGAGATTGTAAAA
ACGATTGAAGGTAAAGGTGGTGGAAAGAAAGGACAATTCCAAGGCAAAGC
CAACTCTTTCAAAAAAGTTGATGAAGTCGAGAACATCATCCAAGGAGCCG
TCAATGAATCGTGAGATTGTAAAAACGATTGAAGGTAAAGGTGGTGGAAA
GAAAGGACAATTCCAAGGCAAAGCCAACTCTTTCAAAAAAGTTGATGAAG
TCGAGAACATCATCCAAGGAGCCGTCAATGAATCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1257587..1262984 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1072-1194:124 |
| Aaloc | 976-1068:511 |
| Aaloc | 916-975:853 |
| Aaloc | 823-912:1310 |
| Aaloc | 757-822:1825 |
| Aaloc | 628-753:2623 |
| Aaloc | 574-627:2918 |
| Aaloc | 511-570:3152 |
| Aaloc | 352-510:3510 |
| Aaloc | 295-348:3731 |
| Aaloc | 151-291:4400 |
| Aaloc | 133-150:4751 |
| Aaloc | 1-132:5399 |
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