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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:7388..13131+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038806 ID=XLOC_038806|Name=XLOC_038806|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5744bp|location=Sequence derived from alignment at sc0000117_pilon:7388..13131+ (Clytia hemisphaerica_ch_hm2_pilon)
caGAGTTACAGTCCACGTGTGGACGACTATTTGCGTGCAGTGAAAGATCA
TTTACATGAAGCGGTCACTGATTGTTTGCGTGCTGCTGGTCATTTGTTCg
atgaaaaagaacaaagagaACTCATGAGGGTAAAAATAATAACTATGATA
ACAACAAAATACTGATAGGATGAGAGAAAATGATGGAATCCCCGAAGATT
AGATTGCGAAATTAatattgaatgaattttttgcgcAAGCAATGCTATTC
GGGGaaaatttcgttaagccgatatcgtctatttaagaaaattatgtatt
ttttcagccgaaatgtttaaaaaatttggaGATTATCGGCAATGATCATT
CTCAGGCAACCTTTTGTCCTTAAATTGTCAACATCTAGGAAAATCCTAAA
TTCGTATTTATGATAGAGCTGCTTGAACTAGTTTTTACTTGGTACACAGG
CTGCAAGCTTCGGCAAATCGTTCGTTCAAGACATGCGACCACAAGCTTTC
GTTGAAATGGCTCACACTATACGAATCCTCAATAATATCAGAAATTTCAA
GATTGGCATCCCTATCACTTATGATCAGTAAGGAATCATATAGACCtctt
tttggcttgaaaaagGCCTCTAATACTTTTGTTAAAATTGAGAACATTCT
CTTATAGTTAGATAGTTGAAAGTATGTGGTTTTTGGACCATAGTTAATAT
TTATTTGATGTTGACGCGTCAGGCAACTCGGGCAATAATTAAGCTTGTTT
GGCTTAGTCAAGACACTGTTTAACCCTCAGCTGGGAACCTAGAggttttg
ataacttttttgagattcagaCGGGACGATGGAAAACAGTAACTAAAGCA
ACGACTTGCTTTGAGATGAGACTTGGTTTGTCTGAATATcattaaatctt
tatttttttcagattgcaGCGTTTGACACTGCCAGTTCTCATTGATCGAT
TGATCGCACGAAGGTTTTTCTTCTTGGCTGTCAAGATTTGTAATTACATG
AAAATACCGAAGAAAGAGGGCGTCAGTCGTGTGTTAGCACACTGGGCCTG
TTATAAGGTTAAAATTTAAAAGCATTTGCAATAAGTGTAATTTTCGGTTT
AACTTTTTAATCTATTTTTAATACTgttaaaaaccttttaaaacAGTCCT
CAGAGAAatgtatattttatttatttgtgtAGGCTTGACGAAATTACGTT
TTGCTTTGAGTATTCAACTAAAATATTAGTTCTTAAATCAGCCCTGACAG
CGAAAGAGTTCGTATCATTTAGTCTTATTATTATAATAATACAACCTGCT
TAATTATTCTTACAGGTGCAACAGGACACAGTAGACGAAAACCAATTGGC
TAGAGAGATTCACAACAAATTACGAGACACTCCCGGTATTTCTTTTACGG
AGATTGCAACCAAAGCTTACAACAGAGGGAAATCAGCTCTGGCGATCGAG
GTAAGGGTTTTAATATGTTTTTAAGAGAAAGTAAGGATTAAGCTGCTGAA
GGTTTCTATTTTAAAGATCGATGGTTTACTGAATTAAAGTGAATTCTCTG
ATCTTCATTAACAGATAAAATCGAATAGTCAGTTAATTAAATTaatttat
tacttttcacttaaAAGTTAAATTCCTTAGCGTCAACTTAGGAAGTGGAC
AGGGaactacaaaattttaaaaatcaatttctctTAGCTTTTGGACTATG
AACCGCGATCTGCAGAGCAAGTCCCTTTATTGATGAAGATGGGCAAAACT
GAACTGGCTCTTCAGAAAGCCATTGAAAGTGGAGAAACTGAACTCAGTAA
GTCAACCTACTGtatattttgtttagaaatttatttattgCAGCTTGAAT
TTCAATTAAGGAAGTCAAATCAAAGAATAGTAAAGGTTTGCTTAAGGGAA
AGGTAGACCAACAGGTCCAACAACTTAAACAACAGGTCAAGCCACTGATA
ATATTTTGAGAATGCTTCTTTATATGAAAATCATAGTGTCAGCTATGTTG
AGGGGAGGGGCTACAACCCTAAAAATGGCGGGTCATTGTCATTGTGAGCC
ACACTTTTAACGATATCATATTATTTTGTTGCCAGTTTGGTATATGTCAC
TATTTCAAAGAGGCGATACTTTTAATGTAACACACATTTTTCAGTTTACA
GTGTGACAACGTACATGCGAGACCACCTACCAAGCACAGAGTTCTTGATG
AAAATTCGGCTCTATCCTGTGGCTGCTAGTCTCCTGATGAAGGTATGCTT
AACGCCTTTTAAACTGAAGGACTCTACACCGTTTTAAACACGAAATCTCG
TGAATATCAGAATGAAAAACTTAGTCTATCACTGTAATATTCGTGTTGTC
AATATTCATTTCTCTTATATACTTTTCATCAGATTTGCAAGACGCAAGAT
CGTTCTTTCCTGATCAACTTGTGCTATCAGGACGACAAATATCAAAACCT
TGGTGCTCTGTACATACAAGAGAGCTTCGTTGAGAAGAACCTCGATTCCA
GGATCAAAGGATTGGACAAAGCCAGGATAGAGTTTGGTAAAGCACAAGAT
CCTTTTAAAGCTCAGGTACCAGCGTTATGTCTCAGAAAGATCTTTAAAAC
ACGAGATAGGCTGCTAACAAAATTTTCGTTGAGTAGGATATTTGTTTTGC
CACCATGTTGTTTACTGTTATCCATTTTTAAATCCTGTAGCCTGAAAGTA
ATATATATTGATTATGTTCTTAAAAACGAGCCCCATGAACACAATATAAA
GCGTGCCAGATTCGTTGTAATGCAAACATGCTACACTTTCGTCTTATGGG
ATATCCAATCGAGTCAAGTACATAGTAAGAGAACAGTGCTTTAAAAAGAG
GTGGatattttggacctaccccggtggaggtcctataaattaacctgtgt
ttgttcgtccgttcgtccgttcgtctgttcgtccgtccgtttgtctgtta
ccaacttttctcaggattgaatcataggaatcgtttgatttttggtacaa
aggtgcaaaatggtggtggccaaaatgtgacggagcccgattttcgaaaa
aaaaaatttttgggcaaatttgggccaaaaaacggctaaaaaacgggttt
tttggactttgtgaaaaattggatcattaattttttttgattttttgtat
gaaagtagggtaccatcataggtaaaagatggctcaaacagaattttgca
aaaaaattttgttggctcaaaaaacgcatgtttatctataagaattacta
ttaataagcatacatcaatgttcttagtcaaattaatcaatttttttatg
agatagatgtttttttttgctcatgagggcttacttttgaagaatatgtg
tgtttaagaCAGGACATTTTAGTTGCTTGgcttgttcttatagaaaaact
ggccaaattcgatattttttataagcacattatcaattacttaggtatta
gcttttctcgagattggctttttcattctttatgatattttgcacaaaga
tgcataactataaaccttcgaatgtgatggagtccgattttcaaatcaaa
atgttattgggcaaattttggccaaaaaacggctaaaaaaacgggttttt
ggaCTTCTGAAAATCATTGGatcctttttttttctgattttttgcAtgaa
Agtaggtaaaagatggctcaagcagatttttgtaaaaaaataatttttca
gctcaaaaaacgcatctttatctataagaaccactattAATAGGCATAta
tCaatgttcttagccaaattactgaattttttgatgagatagatgttttt
tttgctcacgaagtcttgaatatgaaagaatatttcaagagcatgaaatt
tcggtttctaaacgtttctttataagaaacaaacgactaatttaaataga
tcgtaactatttgtgttctgaatgattgtttaatggtcacgtcacgtaga
tatcaattataaatatgttaaatgcataaccaggtaggtccataaaagta
tcacttgtttatttttATGCGACTTATGAATTTCATAAATTCTTCCCTGT
GTTATTTAACAAGGTGACGGAAGATAATATCAAACTGTTGGAATTTCAAA
GCCGTTTACAAGACCAATTTGGTGATCAGTACCTAAATAAAACCATTGGT
GATACCCTATACCAATTGATACATAAAGGCTATTACAAGAAAGCTGATCA
ATTGAAAAAGGAGTTTGCCATTCCAGATGTTCGGTTCTGGTGGACGAAGA
TACAAGCTCTTGGTGCTTCACACGCCTGGAAAGAGctggaaattttttcg
aaaagtaaaaaatccccAATCGGTTATGAAGTAAGGAatctatgaaattt
ttttttctgaattacAGATTTCTAAAGATGTTCATTCTATATAGTTTCTC
CATTTCTCCATTCTGCACGCTTGGGTTGGTGTAAAATTGCTTTAATGGCT
CCGGAATTTTTACTCGTCGTATTTCACCAAAGtcattttaaatcaaactt
ttcatttAAGCCTTTCGTGGAAGCATGTCATAAATTTGGCAATAACAAAG
TAGAAGCAGAAAAATACATGTCAAAAGTCCCACTTGATAAGAAAGTTCAG
CTGTTCTTAAAAATCGGGTAAGTTGctcgaaaatgaaagttataactcca
atataaaaaacatgtagaatAGGATCTTTTATTCAGTATGGCCATTAGCT
GAGGCAGTTACATGCCACTTTTTTATGATAGCTTTCAAGGGCCGATTAAT
GGTTATCACATAACTACTACGAACTTCCTTTTTTCCTAATATAAATCCCA
GATGGgcagcatttttattttattcggAAAGTACGCCATAAGTAGTTTTT
GTTCTTtaaactacacgcttttttatgagaacacgaggctgaaaattgac
caaaacctaaGGGCAATTTAAAAGAATAATCTGAGCctcattctttttaa
aaaattctttcaaatttcgaaattacaaatgaaagtactgattttaaaag
atttaaacctatttttaagaacattttataacaatagcgttcagtttgag
gtcgttgaaagcttaacgctattactattattatccatatcggaaattca
aacaactttttttctagcgtcaggcaagtcttttcgcttcaatgcaatga
cttcaacaagttttgagtacccttgcgagcgggccgcaaatgaccaaaaa
gtgttttttttctgacgtcggtttagtctcaccgcttcaatgcaacgact
tcaataaagttccgagcgggccgcaaatgacgttatcgccctataaccag
ggCGGTTAATGGCCCTCTGAAGCACGCcgccttagttttctcagcgcggg
tatgactatttgagtcatagaacctttcaatacagcccgccgttcgaatc
tttaatggcttacttaatgaccgctatatggataataataaaCCATAtga
tttaagaaaattaagaacacaGGATTTactatttcttataaaaaagcgtg
tataagtTTATGTCTGTTTACAATTGTGTCTAAATCTCTCGGAATTCTCT
TTCTTTTCTCTAGATATTACGATGAAGCAGCTGAAGCAGCTTTCCAATCA
CGAAGTCATGACGATTTGAATCTAGTCGCTTCCAAAGCATCCAATAACCG
ATCTGTTCAAGAAAAAATCAACATCTATCGCACACAATTGTCTCAAGGGG
TACCTGCATTCTCATTGAAAGGGAAAGGATTCTCTTTGAGCTAA Coding sequence (CDS) from alignment at sc0000117_pilon:7388..13131+ >XLOC_038806 ID=XLOC_038806|Name=XLOC_038806|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2964bp|location=Sequence derived from alignment at sc0000117_pilon:7388..13131+ (Clytia hemisphaerica_ch_hm2_pilon)
caGAGTTACAGTCCACGTGTGGACGACTATTTGCGTGCAGTGAAAGATCA
TTTACATGAAGCGGTCACTGATTGTTTGCGTGCTGCTGGTCATTTGTTCg
atgaaaaagaacaaagagaACTCATGAGGcaGAGTTACAGTCCACGTGTG
GACGACTATTTGCGTGCAGTGAAAGATCATTTACATGAAGCGGTCACTGA
TTGTTTGCGTGCTGCTGGTCATTTGTTCgatgaaaaagaacaaagagaAC
TCATGAGGGCTGCAAGCTTCGGCAAATCGTTCGTTCAAGACATGCGACCA
CAAGCTTTCGTTGAAATGGCTCACACTATACGAATCCTCAATAATATCAG
AAATTTCAAGATTGGCATCCCTATCACTTATGATCAGCTGCAAGCTTCGG
CAAATCGTTCGTTCAAGACATGCGACCACAAGCTTTCGTTGAAATGGCTC
ACACTATACGAATCCTCAATAATATCAGAAATTTCAAGATTGGCATCCCT
ATCACTTATGATCAattgcaGCGTTTGACACTGCCAGTTCTCATTGATCG
ATTGATCGCACGAAGGTTTTTCTTCTTGGCTGTCAAGATTTGTAATTACA
TGAAAATACCGAAGAAAGAGGGCGTCAGTCGTGTGTTAGCACACTGGGCC
TGTTATAAGattgcaGCGTTTGACACTGCCAGTTCTCATTGATCGATTGA
TCGCACGAAGGTTTTTCTTCTTGGCTGTCAAGATTTGTAATTACATGAAA
ATACCGAAGAAAGAGGGCGTCAGTCGTGTGTTAGCACACTGGGCCTGTTA
TAAGGTGCAACAGGACACAGTAGACGAAAACCAATTGGCTAGAGAGATTC
ACAACAAATTACGAGACACTCCCGGTATTTCTTTTACGGAGATTGCAACC
AAAGCTTACAACAGAGGGAAATCAGCTCTGGCGATCGAGGTGCAACAGGA
CACAGTAGACGAAAACCAATTGGCTAGAGAGATTCACAACAAATTACGAG
ACACTCCCGGTATTTCTTTTACGGAGATTGCAACCAAAGCTTACAACAGA
GGGAAATCAGCTCTGGCGATCGAGCTTTTGGACTATGAACCGCGATCTGC
AGAGCAAGTCCCTTTATTGATGAAGATGGGCAAAACTGAACTGGCTCTTC
AGAAAGCCATTGAAAGTGGAGAAACTGAACTCACTTTTGGACTATGAACC
GCGATCTGCAGAGCAAGTCCCTTTATTGATGAAGATGGGCAAAACTGAAC
TGGCTCTTCAGAAAGCCATTGAAAGTGGAGAAACTGAACTCATTTACAGT
GTGACAACGTACATGCGAGACCACCTACCAAGCACAGAGTTCTTGATGAA
AATTCGGCTCTATCCTGTGGCTGCTAGTCTCCTGATGAAGTTTACAGTGT
GACAACGTACATGCGAGACCACCTACCAAGCACAGAGTTCTTGATGAAAA
TTCGGCTCTATCCTGTGGCTGCTAGTCTCCTGATGAAGATTTGCAAGACG
CAAGATCGTTCTTTCCTGATCAACTTGTGCTATCAGGACGACAAATATCA
AAACCTTGGTGCTCTGTACATACAAGAGAGCTTCGTTGAGAAGAACCTCG
ATTCCAGGATCAAAGGATTGGACAAAGCCAGGATAGAGTTTGGTAAAGCA
CAAGATCCTTTTAAAGCTCAGATTTGCAAGACGCAAGATCGTTCTTTCCT
GATCAACTTGTGCTATCAGGACGACAAATATCAAAACCTTGGTGCTCTGT
ACATACAAGAGAGCTTCGTTGAGAAGAACCTCGATTCCAGGATCAAAGGA
TTGGACAAAGCCAGGATAGAGTTTGGTAAAGCACAAGATCCTTTTAAAGC
TCAGGTGACGGAAGATAATATCAAACTGTTGGAATTTCAAAGCCGTTTAC
AAGACCAATTTGGTGATCAGTACCTAAATAAAACCATTGGTGATACCCTA
TACCAATTGATACATAAAGGCTATTACAAGAAAGCTGATCAATTGAAAAA
GGAGTTTGCCATTCCAGATGTTCGGTTCTGGTGGACGAAGATACAAGCTC
TTGGTGCTTCACACGCCTGGAAAGAGctggaaattttttcgaaaagtaaa
aaatccccAATCGGTTATGAAGTGACGGAAGATAATATCAAACTGTTGGA
ATTTCAAAGCCGTTTACAAGACCAATTTGGTGATCAGTACCTAAATAAAA
CCATTGGTGATACCCTATACCAATTGATACATAAAGGCTATTACAAGAAA
GCTGATCAATTGAAAAAGGAGTTTGCCATTCCAGATGTTCGGTTCTGGTG
GACGAAGATACAAGCTCTTGGTGCTTCACACGCCTGGAAAGAGctggaaa
ttttttcgaaaagtaaaaaatccccAATCGGTTATGAACCTTTCGTGGAA
GCATGTCATAAATTTGGCAATAACAAAGTAGAAGCAGAAAAATACATGTC
AAAAGTCCCACTTGATAAGAAAGTTCAGCTGTTCTTAAAAATCGGCCTTT
CGTGGAAGCATGTCATAAATTTGGCAATAACAAAGTAGAAGCAGAAAAAT
ACATGTCAAAAGTCCCACTTGATAAGAAAGTTCAGCTGTTCTTAAAAATC
GGATATTACGATGAAGCAGCTGAAGCAGCTTTCCAATCACGAAGTCATGA
CGATTTGAATCTAGTCGCTTCCAAAGCATCCAATAACCGATCTGTTCAAG
AAAAAATCAACATCTATCGCACACAATTGTCTCAAGGGGTACCTGCATTC
TCATTGAAAGGGAAAGGATTCTCTTTGAGCTAAATATTACGATGAAGCAG
CTGAAGCAGCTTTCCAATCACGAAGTCATGACGATTTGAATCTAGTCGCT
TCCAAAGCATCCAATAACCGATCTGTTCAAGAAAAAATCAACATCTATCG
CACACAATTGTCTCAAGGGGTACCTGCATTCTCATTGAAAGGGAAAGGAT
TCTCTTTGAGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:7388..13131 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2365-2544:5565 |
| Aaloc | 2257-2361:4511 |
| Aaloc | 1990-2256:4064 |
| Aaloc | 1807-1989:2383 |
| Aaloc | 1711-1806:2147 |
| Aaloc | 1600-1707:1688 |
| Aaloc | 1465-1599:1316 |
| Aaloc | 1321-1464:914 |
| Aaloc | 1192-1317:450 |
| Aaloc | 1063-1191:1 |
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