|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000068_pilon:836684..842547- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038800 ID=XLOC_038800|Name=XLOC_038800|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5864bp|location=Sequence derived from alignment at sc0000068_pilon:836684..842547- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACCATCAGCCACGG
TAATGTTGTAATGATAATGGGGCATATTATTTTTTGCAATCATTTTTGTT
TTAAATTATTTTTTCAGTTGAATCGTGTAACGTTGTCGAAAAAGAAATCT
GACATTCACTGGCCTGTACTTGCTGTCAGAACTAAATAAATAGAGAACAG
TTTGTTTTAATCAAATGGATGAAGTAGATTACTTTAAATGGGTTTGCTTT
CGGTTTGAACTCTACTGGGTAGGTCAAAGGTCAGTAGCAAATTCTGCTGG
AGCGTTTTCTTGTATAAACCGATTTTTTCCTTTTTAATTTCAGGGTTTCC
GTCCAAAGCTCACAATCAAAAGAAAGAACGCCTTCACTACCCAGGTATTG
TCCTTTTACCCTTTACAGTCGCCATCTTTGCTCTTTTGTTTATCTATACC
ATTTAGTACAACGATATTTCAATTTTATACAATCAACAGTGTGATGACCC
CTTTTAAAGATAATAATGTTAGGTTCTGACAAAATTCGGGGTATCTTCTA
AGCTCCATATGGGTTGAATAATGATAATAAGAACAAACTAAGAACAATAA
GGCTTCCATGGCCAAAATATAAACCAGTTGAGTTGAAGTTTTTATAAGAT
GCTCACATAATTGGTTATTCAAAACAAAAGAGATGACGCGTTTTTTAGAA
AAATATAATAAAAGTTTTTGTTTGAATAGTTAACGACCAATCCCATGACA
AAAATTCTTGTAAATGTTTATCTTGACCCATATAAAGGCCCATATAAAGA
GCAAGTTAAGAACATTTAAAGGCCTTTTGCAGACTATAAGATACGCTATT
CCTTAGGAAATGGCACATTATTTACTCACAAAATCGGGAAAGTTAGAGCC
TATTAAGAACATTCTTAGGCTTGAAATAGAAGTTAAAGATCATTCGAAGG
CTTCAACAATTTTGAATATTCTTATAAAAAACATGTACATTAATTAGCTT
TACAGAATCAAGTAGTCGTTTTCATTCTGTTTTGGCCTGTGCTATATCTA
CTGATTAAAGTTGTATAATTGTACGTGTAGGGGGAGGTAATACCCTATTA
GCAAATCATATTAACATGTACAAATCCAAAGCCATGTCAAATAATCCCCA
TGTTATTATCATCGTCTTATTTTCTTCAAAACGCCTACTGATGAGATTAT
TATCAAGTTTTATACCGACGTAATGAATTTCCTTAATCTTTAGCAATGAG
AGAACTCAATAGCACTTTCACGCCCAAATGGCAAATCATAATTCACGTAA
ATAAAAATTGTTGATGAGTCGTTTTGTTAAAAAAGTTCTGCTCTTAGCGT
TATGATCAAATGACAATCGACACATAACAATTTTCAAAGGTCTCATCGAT
ATAGCTCTTGTATGAAGCCTGAGTTAATGAAATCACAACTTGAAAATAGA
CAAAAGATTCATTCATAGAATGGGCTTTTCCAGAAAAAATTTGAATGTGG
GGGTAGAGGATATAACAAATTTACCCCCCAGACAAGACAAATTTTGATGA
ATTTCCGCTACCCCCGAACAATATATCCTATGCCCCCCCCCCCATGTACG
AACATTTTCTGAAAGAGCCAAATATTGGTTTAATCATCAGACGATAGTGA
ATGTAGTACTACAAATCTAGACATGAAAACTAATATTTAATTCATATCAC
CTTGAAAAGATGATGACATATATTCTACACCTGTTAAATTTTGAATAGTA
AAAACATTCTTATAACCCAACGTCACAGGCTAAATATCAAACGACCATTG
AGTTTCAAGCCCGAAGGGCTAGAGACGAAACTTTAAGCCATCTCAAGCAA
GAGAAATTGAAGCCACTTATTTCACATCCAAAACGCGCATAGAACGTGCC
GTAATCATGACGACGAATTGTATCTAGCAGTTCCTTTGTTTTGGAGGACT
ACATTTTTTGAAATCTAGCGATAGATTTTAGTTTCAATCTGGCGTTTGCG
TAAAAACTACGCGCGGGCGTTCTGGATGGGAAATAAGTGGTTTCATTTCC
CATCCAGCATTCTCGCCTCTAGCCCTTCGGGCTTGAGACTCAATGCAAAG
TACGTCAAGGAAAGCCAAACTGCGATGTTAACTCGGTGTTTTTCGCTGAG
AATAACTTATAACACCTAAACACTGAATTTTCCCAAGGCCAAACAACACG
TGTCCCATCTAGCCCGGCTTCCTTAGGACAAACCCATCCGTTTAATCTGA
AAATTCGCTTTTTGTGCAGCCGGTATTATTGGTGATTGGTTCACAGCAGG
GCCAATTCTTTGGATAAATCTTTTTTTATCAAGCGGTGAATTTATTTGAT
TATATACAAAAACGCACTTGAACAAATTAATTAGCGTGTTATGAAAATTT
ATGCCACTGCTCAGTGTCACCTTCAGACTGACGTAAATTGCATACATTGT
ACATGTTTTTTTGATAACAACAAACTATATAAAAACATAAGGCTTCGATG
GCCAAAATATCCTTTACTTTCTCTAAAACATCCAATTTCATAGGAAAATA
GACTAAAATATTCACAAAATGGTGTAAATAAGAAGACACGTTAAAGAACA
TTTGAAAAGTAAAAAAACCTAAGAGCGTCCAAAGGCTTCCAAAGATTTTT
ATGTTCTGTGTTAATGTGCCGGTGCGTGACAGAGCTAATTTTGAAACCAT
ACGACGGGTCAGTAAACTTCATCGATTGTGGATGATCACTTTTTGAGTAA
AATGTTTTGCTCCACCTTTTACAGTCACCTTTCACGATTATCTTTCTGGT
ATATTTATTGTCAAAAGCCTGTAAATCAAATTTTCAAGATAGAAAAAGGT
CGCTTGTGTCATTACAATAAAGGAAAAGCTTCCCTCCTCCCATGCACTTG
ACGAGAAAAGTGCCATTTTTGACATACAATCATAAAACTAGTTAGCAACT
AACGATAATGCATCAATCACTACGTGAAATCTTTCATCCTTTTCCATAAG
ACGTGTCAAAATTATGAATATAAAAGCACATAAGATGAATGCAAAAAGCA
TAACTGTCCTGTCGTAGTCAAAAGGACAAGGATATTTTCGAATATTCAAA
GGACTCACGATGCAGATCTTTATCTTTTCGTTGATTGCTTCGATCGCATA
CACTCAAGGTGAGATCTAAATTGACTTTCCAAACCATCTAAATTGAACCG
TTGGACCTTTTCAGTGAAATATATTTCTTGAAAATGAAACTGTTAATGTT
AGATGAATTAAGAAACGTTGCGAGCTTTGTAATACATCGTCACTTTAATA
TTTTTCAAGGTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGATA
AGTGAGTGATTATGATTTTTGTCTTTTCCCTTATGAAGCATTATATTATG
AAGCCCATTATCCTATTCAATAATCCCCCTTTTTTTGCTAAAAATTTGAA
AAAACCCGGAAGCAAACTGACTTTTGAACAAGAATGCCCTTTGAGGGAGT
GCTTCAGAGTCCGGTATTCCGGTATTCCGGTTATGAGTAGAAAAATTACC
GGTATTCCAGTATTTAAGATGCCTGCCGGTAGCGGTATTTACAGAGATAT
ATACTGGTATTTCAGTGAAGGATTAGAAAATGACCGGTATTCTGGTATTT
TGTACCCTCGGAAGCCCCCCACCTTTGACTTTCACAATTGCACCTTTCTG
GCAGAAACATAAGACGGGGATAATGGCAATATAACCCTTGTCTCGTACTT
CAGCTCGAGGAAGTCAAAGGCAAAAAATAAATAAATAACAAAACATTTTT
GTTCAATCAAGGTTACGATGAACCAATGCCCGAAGAAGATGCACAATATG
ATGAAGAAATGTACCATGATGGTCCAAGTGAGTCTTTTCAAATATTTTTG
TATTTTGTATTTTTTGTATTCAACATATAGAGTATCGCTCGGTAGATTAG
GACGGACCAATGTCATATACAACTCTTGTCTTGTACTTCAACACGAAGAA
GGTCAAAAAATAAATAAGAAAAACTTTATTGTTCAAGGTTACGATGGACC
GGTGCCCGAAGGAGCTCCACAATATGATGAAGAAATGTACCAAGATGGTT
TGAGTGAGTAGTTTTGATATTTCCTTTGACGACAAGGAAGTGATTGAAAG
TGAGGCTAAGTCTTGCTTTCCATGGGTTTCAAAATGTTATCACCAGTCCA
AACGCTGAGTCTAAAATGTCTGGAATTATTTTGGGATTGGAGATTGATTT
CTTTTGTTTACAAAGAGTTGAAATTATAATCGTAATTTCTTCTTTAGGCT
GCAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAA
AGTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTG
CTCACCAGACCCAGCTCCTGGTAAGATATAATCGAAATCAATATATTAGT
AGTAGAACCTCTTTTTAGACTTTTTATAAATTTAAAAAAATAAAATTTAA
CCATCATGCTTTGCTGCAAGGTAGTTGTTTTGAGAACATTCATTATCGTT
AAGACTCAATGTAGACCAGTTAGACTTAGCTCAAAAAATGGGATAAATAT
TCAATACTTTTTATACTATTACTTTTCACAGCTTATGTGACAGCTGAACC
GAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGGTATGACTTTCAGTG
AATTCCTGAACGCTGGTAAAAAAATTAATCTCGTTGGAGTGGCTATAAAT
GAACAAAATATTATAGTAAAGAAGTTACAAGACAAAAGAAGAAAGAAACC
AAATATCACTAATTGTGAATGTTCAATTGTTTTACAAGTTTGTTTTGGAC
ACGTGATTTTAATTGTTCTCTTTATATAATGACACGTGTTTCGCGCAATG
TTTAAATTTTACTACTGTTATCTCCCTTTAAATGTTTGTTAAGCTACAGT
TATTCTTATTTTCTTGTTTATCATAAAAGCAACTTGCTTGGCAGCTCACA
ATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGACTTATGACATG
GACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCAA
GCAGTGGAAACACGACGACTTTCGAACATATAATGGCTACGAAACTGGAG
TTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAAC
GCTGTTACTTCTTGGTAAGATTACTAAGATTAATAAAACTCAATAATTCG
AGAAGGATTCTCATCTATATAATAATAATAGTAGATATACGTATTTGAAC
ACTTTCTCTGCGTGTTTTGATGTTTGCTAGCGATTTCAGATTTCCGTAAT
TCTTTTTCCCGGGGATATAATTTGCATCAACATTTTTTAGCATAAACCCA
GATGATACATATTGGTGATTTTTGTTTCCTGAATATTGTCTATGACTTTT
AAAGATTTTAACAATAGGCTGCGGAAAACCTACGAATTCCTCTACATTGA
ATATTGAGTGATCCGTAATCTTTCTAAATTTGTGGTATTTTAAAGGATTT
AGCCCCTTGAAACACAATGCTAAAAACAGTTGCCATGAAAACATTCTTTG
ATTTGATCTAGGTACGACGAAATCAAGAACTACAATTATGAAACCGGCAA
GTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTT
CAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTC
GTTTCCAGATATTTACCCGCCGGCAACACACAAGACCAGTACACACAGCA
TGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAG
AAAAAGTTTTATAA Coding sequence (CDS) from alignment at sc0000068_pilon:836684..842547- >XLOC_038800 ID=XLOC_038800|Name=XLOC_038800|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000068_pilon:836684..842547- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACCATCAGCCACGA
TGCAGACGATTCTACTTCTACTGGTTGGATTGATAACCATCAGCCACGGG
TTTCCGTCCAAAGCTCACAATCAAAAGAAAGAACGCCTTCACTACCCAGG
GTTTCCGTCCAAAGCTCACAATCAAAAGAAAGAACGCCTTCACTACCCAG
GTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGTTATCAC
ATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGTTACGATGAACCAAT
GCCCGAAGAAGATGCACAATATGATGAAGAAATGTACCATGATGGTCCAA
GTTACGATGAACCAATGCCCGAAGAAGATGCACAATATGATGAAGAAATG
TACCATGATGGTCCAAGTTACGATGGACCGGTGCCCGAAGGAGCTCCACA
ATATGATGAAGAAATGTACCAAGATGGTTTGAGTTACGATGGACCGGTGC
CCGAAGGAGCTCCACAATATGATGAAGAAATGTACCAAGATGGTTTGAGC
TGCAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGA
AAGTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATT
GCTCACCAGACCCAGCTCCTGGCTGCAAGGATAAATATTCAAATTGTCCA
ACTTCTTTGCGTCAATATTGCGAAAGTCACAGTTTTGTGAAGACGGATTG
GTGTCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGCTTATG
TGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCT
TATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAA
AGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGCACTCCACAGAGACA
CATCCTCAATGACTTATGACATGGACCTCGCGAAACGTGCTCAAACCTAC
GCAGAATATCTCCTGGAATTCAAGCAGTGGAAACACGACGACTTTCGAAC
ATATAATGGCTACGAAACTGGAGTTGGTGAAAACCTTTATTGGTCGTCTT
CAGCAAGTGGAGCCTCTACTAACGCTGTTACTTCTTGCAACTTGCTTGGC
AGCTCACAATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGACTT
ATGACATGGACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTG
GAATTCAAGCAGTGGAAACACGACGACTTTCGAACATATAATGGCTACGA
AACTGGAGTTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCT
CTACTAACGCTGTTACTTCTTGGTACGACGAAATCAAGAACTACAATTAT
GAAACCGGCAAGTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGT
TTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTG
GAACTTACGTCGTTTCCAGATATTTACCCGCCGGCAACACACAAGACCAG
TACACACAGCATGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGA
TGCTGTAGAAGAAAAAGTTTTATAAGTACGACGAAATCAAGAACTACAAT
TATGAAACCGGCAAGTCAAACGGTGGAGATATTGGTCATTTCACACAATT
AGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAG
GTGGAACTTACGTCGTTTCCAGATATTTACCCGCCGGCAACACACAAGAC
CAGTACACACAGCATGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGA
CGATGCTGTAGAAGAAAAAGTTTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000068_pilon | genome | sc0000068_pilon:836684..842547 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 688-939:253 |
| Aaloc | 454-684:884 |
| Aaloc | 400-450:1232 |
| Aaloc | 277-396:1566 |
| Aaloc | 211-273:1826 |
| Aaloc | 145-207:2052 |
| Aaloc | 103-141:2554 |
| Aaloc | 52-99:5520 |
| Aaloc | 1-48:5865 |
|
