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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000060_pilon:76524..80891+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038796 ID=XLOC_038796|Name=XLOC_038796|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4368bp|location=Sequence derived from alignment at sc0000060_pilon:76524..80891+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAA
CGTTACTTTCGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCAT
TTAACGAGCTTtgtaaacaagaaaaattgacaCAAAAACGAGAAAATCTC
ATCTCATTATCGCTTTCTGAAGCTGTTGGTGAAAGAAGGAATGTTACCGA
TTTTTACAACTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGC
TtctcttaaaaaacaaacacaaacatCGAAAAATACATTTCCTTTTTGAT
GAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAG
CCATTTGGAGAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAA
GTGTACAGAAATCTCGAAAGATAACCGAGGAAGGCAAGGTCACCAATTCA
CAGGAGATTGTTTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAAA
CACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAAG
GTGAAATCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAAA
GGTATTACATACTATTTACGTAACATTCTTTTATAATCGTGTTCAATTGC
AACAGTGTGCAAGTAAAATATACTCATTTCCATTTATGAccgaaatattt
tcttacattttgattttaatttttcaggaaacGTTTTGCTAACAAAAGAC
GAATCTAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGACGA
AAACAGACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTTA
ATGAGGTAATTTTGTTAATGAGTGTACTGTTTATAATTAGCTTACCATTC
AAATTGAACAATGAAGCTATTTTCTCTTTGTCAGAACCGATAATCttttc
agaaattcttttaacagattttttgttaaaggttttatttttacacaagt
gttcctgtttcatatcagacacatattttatatccGGACAGTGTCTAcca
tgctgatataagcaaaaagatgtttttcttttcctgattctgaccaatct
tgctccacatccgtatcaatccaatgtgaaaaagcttttgaattaaaatt
gatgagtaagcaaaggatatcactcttatttgaaaacaaaacctttaatt
ctgTTTTTCCAGACTAGAACAGgttaactttttgtgttggatataacaac
ttatttttgaaattccgtTCAAATGATCTAATTCGGATGTAATTTGCTTC
TCTATAACTTGTGAAAAAACGTGCTCTCCTTGGCAACACGCCCTCCTCAT
AGACCCGCTAGCAGGATCTTTCAGGAAGTTGGGGTTTAAATAAAGGACCA
AAATTCCCCTgctgaaaattcttgaaaagttcttgaaaagatcttatcaa
gaaactttgtttattctttttcagtttcttactacgaacgtgccaagatc
tttcaagatctttaacGATCTGATAAGACTCTTTTATAAGTTTTGAATAA
GATTCTTCTCCCTTACAGTGATTCAAGATCTTGACGGAATTttaagtaaa
agtaagtcggAGGTGACCTGAAGGCTCcactttcgatagctatctacctg
aaggtaggggagggttgCTCCACTTacttgctgagcatcaagcagagagg
catcaagtaccattttgggaatctttggtgtgacccggccgggggttgaa
cccacaaccttgcgcaccgtagacgggtgctctaccactgcactatggTC
GCTGACGGAATTTTACTACTATCCCCGTTCACTTATTGAATAAGGGCCGA
AAGCTTCGCTCGAGTGACAGCATTCAACTGATGACCTCGTCATTAATCAA
CTATTTCATTAATACAGTCAATGATAACAcacacacaaaagaaaaaaacc
acTTACCGTATTTCGAAGCTGACCAAAAACTGTTTCGTAAATACTATCCT
AAGAGATTGCTCTCCTTGAGTCTAAAGACtccttcttatgaaaaacaatc
ataacCAGAAATTTACGTGCTTTTAAGATTCTTAACTCAAACTTGATAAG
AACCACTAAGAATCTTAAAGCTTCTTTGCACGTAATAGTTAgttaagatt
tggaaagtctctttataaaaactttacaagttacgcaaagaatcttaaaa
taagatctttaaagatctttttgttggaagaaattttcaagattgcctAA
GAATcgttgtaagatcttacaaagattTTATAAGAATCTTACTTattaaa
gatcttgaaagatcttcaacgatcttttcagatcttatcaagaattttta
ccagggtcAATTGGGAAGATTAATATATTCCATTTTTTGAGCCAGAAAAC
TCAgtagggatggaaaaaatagcacaattctttttagagtataattttcc
actggggactaTATTTTCATCAGTTCTCTTTCAATATGAATGGGTTCTAC
TTGATCTGTGATAAGTGGCTAATTGCCATCGATTTTAAAGCCCCAGAGAG
GCTAGTTCTAAAATtcctggatggaaaatgaagccacttatttcccaatC
AAAACACGTAACCCGTgtgtttttcaaataaaatttaaaagtgcaCGGCA
AACTTAagtcttcactttttcttgcttaaaaAGGTAGAAGATTCTTCTCT
AGCACCTTCGTACGATGACCCAGAAGGCTCAGAACACGCACTTCTAGTTT
TCAcacacttccagttcttataaaatttgtgtaCTAGAACTTTCTTAGct
caatggcccagaaggctcaagtgacactgcgcacttctgactTGTTATCA
CAGCGGGAAATTTCCAAGCGAGCGGCCCGcgcaatgaaattttttttttg
gtctttaaaatgaatgtcAAGTTACgcaaagtgaattaaaatttccGAGT
TGTTCATATCAAGAGTAACAGGTTAAAATTACCGATTTAAGTGCTGGTCA
GCAAAATTTTCCCCTAGTGGCAAAAATCGGTAAATTTTCGGGCTTAAATC
GGAAAAGCAAAAAGTgatagaatatcaactttATTTTTTGCATCCACCTT
TTCCACCCCTTCCCTCAAAGTAGAACTAATAGAAATGAAACCAATAGCTA
GGCAAAGAAAAATAAAGCACCAAAATCTAAGAGGTTCCGTACCATTTACT
TCCTGGTATTTCTTCAGATTTGTTTGCtacaaaaaattccaaaaattcca
tagattttttattctttctaaTTGCTTCTGGTGAGCATTTACGCGTCAAA
ATAATGTTGTTATATATAAATCACAGACCAGATTTACAACTCGTCAAACC
ACAAATGATTTCGTTATTATCATTAGCTCATTTATTACAACTcggtatct
attttgctgaccagaacgGCTCTCTTTCGAGGGGGAATTTGCgtatctaa
aatatttttagaagtgtgcagtgtcgtcacaaaaaaactcggaagtgcgc
agtgtctcgTGAGCCTCCTGGGtcatgaccctagacagttctagttcaca
aattttataagaactggaagtgcgtggtgagccttaggggccatcgAGGC
TTCAAACTGAGTTTCACCACTTTACCAACTACAGAAGAAAAGCAAGCCGT
GACTtttctttattcaattttcacAATTAAACCGTACCTTTATGTTTTAa
cgagaaatttcaaattacttCCCATTTATTAGCGAAAAGAAGATCGAGAA
GCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTT
TAAGTCGCAGCCACAGACgagtgaaaatgaagaagtcGTGAAAGAACTGT
CCACTACATATACCTATATGAAAGGAAAATGTGGGCATTCTTTCATGAGC
TCCTTAAAACCACGAATCTTTCATTTCACCAAAGCTTTCACACCTTTATT
TGCTTGGTTCCTTCCGATACTAGCTGCCGTCCTCCAGTTCTGTTTGAATG
AGAGAAAGGAGGACGAAGTCGTGGTATTGTGCGAAGATATCTGTCAAGTA
AAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATA
CGCACCTTACCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAagg
aaaaattcgtcaaaaatttGGACGAGTTGGAGACAGTTCTGATATCTGAT
TATCGGTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGA
TCCAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGCAATCACACGAA
CCATAACAAATCTTGATGTCATTTCAACGAaacctttttcacaaaatgct
TCCACGAGTATCgaaaga Coding sequence (CDS) from alignment at sc0000060_pilon:76524..80891+ >XLOC_038796 ID=XLOC_038796|Name=XLOC_038796|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2730bp|location=Sequence derived from alignment at sc0000060_pilon:76524..80891+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAA
CGTTACTTTCGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCAT
TTAACGAGCTTtgtaaacaagaaaaattgacaCAAAAACGAGAAAATCTC
ATCTCATTATCGCTTTCTGAAGCTGTTGGTGAAAGAAGGAATGTTACCGA
TTTTTACAACTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGC
TtctcttaaaaaacaaacacaaacatCGAAAAATACATTTCCTTTTTGAT
GAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAG
CCATTTGGAGAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAA
GTGTACAGAAATCTCGAAAGATAACCGAGGAAGGCAAGGTCACCAATTCA
CAGGAGATTGTTTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAAA
CACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAAG
GTGAAATCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAAA
GGAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAA
ACGTTACTTTCGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCA
TTTAACGAGCTTtgtaaacaagaaaaattgacaCAAAAACGAGAAAATCT
CATCTCATTATCGCTTTCTGAAGCTGTTGGTGAAAGAAGGAATGTTACCG
ATTTTTACAACTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATG
CTtctcttaaaaaacaaacacaaacatCGAAAAATACATTTCCTTTTTGA
TGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTA
GCCATTTGGAGAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAA
AGTGTACAGAAATCTCGAAAGATAACCGAGGAAGGCAAGGTCACCAATTC
ACAGGAGATTGTTTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAA
ACACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAA
GGTGAAATCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAA
AGgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCGAGG
AAACCCAATCAAATGGAGATGACGAAAACAGACCGGGTAGCTCTCAATCA
ACAACAAAAGTTGAATTTCAGGTTAATGAGgaaacGTTTTGCTAACAAAA
GACGAATCTAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGA
CGAAAACAGACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGG
TTAATGAGCGAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACCCAACG
AAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAGACgagtga
aaatgaagaagtcGTGAAAGAACTGTCCACTACATATACCTATATGAAAG
GAAAATGTGGGCATTCTTTCATGAGCTCCTTAAAACCACGAATCTTTCAT
TTCACCAAAGCTTTCACACCTTTATTTGCTTGGTTCCTTCCGATACTAGC
TGCCGTCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTCGTGG
TATTGTGCGAAGATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAA
AGGATACACAAGCGTCCAATTGCATACGCACCTTACCTTACCGGAGAATA
TCCTCAAGACATCCACAAGATGAaggaaaaattcgtcaaaaatttGGACG
AGTTGGAGACAGTTCTGATATCTGATTATCGGTCTGTTCGTGGATTGGAA
ATGGCTCATACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCACA
TTTTCTCGTCGAAGCAATCACACGAACCATAACAAATCTTGATGTCATTT
CAACGAaacctttttcacaaaatgctTCCACGAGTATCgaaagaCGAAAA
GAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCC
CGAAAACGTTTTTAAGTCGCAGCCACAGACgagtgaaaatgaagaagtcG
TGAAAGAACTGTCCACTACATATACCTATATGAAAGGAAAATGTGGGCAT
TCTTTCATGAGCTCCTTAAAACCACGAATCTTTCATTTCACCAAAGCTTT
CACACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCCGTCCTCCAGT
TCTGTTTGAATGAGAGAAAGGAGGACGAAGTCGTGGTATTGTGCGAAGAT
ATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCG
TCCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCAAGACATCC
ACAAGATGAaggaaaaattcgtcaaaaatttGGACGAGTTGGAGACAGTT
CTGATATCTGATTATCGGTCTGTTCGTGGATTGGAAATGGCTCATACAAT
CATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAG
CAATCACACGAACCATAACAAATCTTGATGTCATTTCAACGAaacctttt
tcacaaaatgctTCCACGAGTATCgaaaga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000060_pilon | genome | sc0000060_pilon:76524..80891 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 730-1365:3733 |
| Aaloc | 604-729:730 |
| Aaloc | 1-600:1 |
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