XLOC_038780 (mRNA) -

Overview
NameXLOC_038780
Unique NameXLOC_038780
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000726_pilon:23023..24018-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038780 ID=XLOC_038780|Name=XLOC_038780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=996bp|location=Sequence derived from alignment at sc0000726_pilon:23023..24018- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAATGATAAAAATGAAAAAGATCAAGGGTCAAGCCAAAGACAATT GTCACTGTTAAGTTACGCAGTGAAGCACAATTGCCGGTTTTCCATCATTC AAGAATTGCTAACCCACGACAAAGTGTGGGAAACTATAAATGATGGATTA AATTTTCAAACTGTGGATGGTGGATTGGATGTAAACCCACTTATTCTATC TTGCATTAATCAAAATTATGAAGTAATGAAACTATTGATTGACCAGGGAG CTGCGGTTGATGTGAGAGATGCAAGCGGCATTCCGCTTTTACACATCGCT TGCAATAACGGATTGAAATTTGTGAAGTTATTAATAAAAAATGGTGCCAA CCCATTCGTGACTTGTTCTTTAGGGAATACAATACTTCACGAAGCAGTGA AAGTAAGGGCTTCTTTTAATATGGTTTATTTTCTTTTGCAATGTGGAGTG GATATTAATACGCAAAATTTTATAGGTAATACCGTACTCGACTTGACGGA CATTGAACCGACTATAAAAGGTCTTTTGCAAGCTCTGAAACGAGAGAAAT CAATGAAAAAAGGCATCAAAACACTTCCATTAAAGCGTAAACGTTCAATT TCATCTCCACAAGAGAAACTGAAAAACGAGGTACAACAGCTAGATAAGAA GATGAAAACAAATGAAGATAACCTGAAAACTTCGCACCAAAAGCTCTCTA TGTGTAAGAAAAAGAAGATGGAACTCCTCAAAGATATTACGAATAAACAG AAAGAGATGAATGGGTTTTTAATGCGAGATATTGAAAATGATATGTTGTT GTTTGATATGCCTTTAGAATGCCCTAGTTGTTTCTTGGACTTTATGGTGG GAGAGAACATCTACCAGTGTAATGACGGCCACCTACTCTGCAGTTTTTGT AACAAAAGACTTAAAACATGTAAGAAATGCAGCACTCGGTTACGTGGTAT ACGAAACAGGGCTATTGAAGGGATTTTTGAGGCTGTATGCAAGTAA

Coding sequence (CDS) from alignment at sc0000726_pilon:23023..24018-

>XLOC_038780 ID=XLOC_038780|Name=XLOC_038780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1992bp|location=Sequence derived from alignment at sc0000726_pilon:23023..24018- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAATGATAAAAATGAAAAAGATCAAGGGTCAAGCCAAAGACAATT
GTCACTGTTAAGTTACGCAGTGAAGCACAATTGCCGGTTTTCCATCATTC
AAGAATTGCTAACCCACGACAAAGTGTGGGAAACTATAAATGATGGATTA
AATTTTCAAACTGTGGATGGTGGATTGGATGTAAACCCACTTATTCTATC
TTGCATTAATCAAAATTATGAAGTAATGAAACTATTGATTGACCAGGGAG
CTGCGGTTGATGTGAGAGATGCAAGCGGCATTCCGCTTTTACACATCGCT
TGCAATAACGGATTGAAATTTGTGAAGTTATTAATAAAAAATGGTGCCAA
CCCATTCGTGACTTGTTCTTTAGGGAATACAATACTTCACGAAGCAGTGA
AAGTAAGGGCTTCTTTTAATATGGTTTATTTTCTTTTGCAATGTGGAGTG
GATATTAATACGCAAAATTTTATAGGTAATACCGTACTCGACTTGACGGA
CATTGAACCGACTATAAAAGGTCTTTTGCAAGCTCTGAAACGAGAGAAAT
CAATGAAAAAAGGCATCAAAACACTTCCATTAAAGCGTAAACGTTCAATT
TCATCTCCACAAGAGAAACTGAAAAACGAGGTACAACAGCTAGATAAGAA
GATGAAAACAAATGAAGATAACCTGAAAACTTCGCACCAAAAGCTCTCTA
TGTGTAAGAAAAAGAAGATGGAACTCCTCAAAGATATTACGAATAAACAG
AAAGAGATGAATGGGTTTTTAATGCGAGATATTGAAAATGATATGTTGTT
GTTTGATATGCCTTTAGAATGCCCTAGTTGTTTCTTGGACTTTATGGTGG
GAGAGAACATCTACCAGTGTAATGACGGCCACCTACTCTGCAGTTTTTGT
AACAAAAGACTTAAAACATGTAAGAAATGCAGCACTCGGTTACGTGGTAT
ACGAAACAGGGCTATTGAAGGGATTTTTGAGGCTGTATGCAAGTAAATGG
AAAATGATAAAAATGAAAAAGATCAAGGGTCAAGCCAAAGACAATTGTCA
CTGTTAAGTTACGCAGTGAAGCACAATTGCCGGTTTTCCATCATTCAAGA
ATTGCTAACCCACGACAAAGTGTGGGAAACTATAAATGATGGATTAAATT
TTCAAACTGTGGATGGTGGATTGGATGTAAACCCACTTATTCTATCTTGC
ATTAATCAAAATTATGAAGTAATGAAACTATTGATTGACCAGGGAGCTGC
GGTTGATGTGAGAGATGCAAGCGGCATTCCGCTTTTACACATCGCTTGCA
ATAACGGATTGAAATTTGTGAAGTTATTAATAAAAAATGGTGCCAACCCA
TTCGTGACTTGTTCTTTAGGGAATACAATACTTCACGAAGCAGTGAAAGT
AAGGGCTTCTTTTAATATGGTTTATTTTCTTTTGCAATGTGGAGTGGATA
TTAATACGCAAAATTTTATAGGTAATACCGTACTCGACTTGACGGACATT
GAACCGACTATAAAAGGTCTTTTGCAAGCTCTGAAACGAGAGAAATCAAT
GAAAAAAGGCATCAAAACACTTCCATTAAAGCGTAAACGTTCAATTTCAT
CTCCACAAGAGAAACTGAAAAACGAGGTACAACAGCTAGATAAGAAGATG
AAAACAAATGAAGATAACCTGAAAACTTCGCACCAAAAGCTCTCTATGTG
TAAGAAAAAGAAGATGGAACTCCTCAAAGATATTACGAATAAACAGAAAG
AGATGAATGGGTTTTTAATGCGAGATATTGAAAATGATATGTTGTTGTTT
GATATGCCTTTAGAATGCCCTAGTTGTTTCTTGGACTTTATGGTGGGAGA
GAACATCTACCAGTGTAATGACGGCCACCTACTCTGCAGTTTTTGTAACA
AAAGACTTAAAACATGTAAGAAATGCAGCACTCGGTTACGTGGTATACGA
AACAGGGCTATTGAAGGGATTTTTGAGGCTGTATGCAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038780XLOC_038780-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000726_pilongenomesc0000726_pilon:23023..24018 -
Properties
Property NameValue
Aaloc1-996:997