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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:403310..411028- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038776 ID=XLOC_038776|Name=XLOC_038776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7719bp|location=Sequence derived from alignment at sc0000079_pilon:403310..411028- (Clytia hemisphaerica_ch_hm2_pilon) CAGCCTTCATCATCTGACCTGAGAGTGGAACGAGATGTATTCTTATATAG
AGCATACATTGCACAGGTATTTTCTTTATATTCATTTGTTGATACACTAT
GTTTTTTATCGCTTTTTGATTTTATTTTTCACCCTCCAAGCTTCTTTTTT
GATACAGCTCCAACTACAATGCACATTTTCAATTATAAATGTATGTAACT
CGCAATATGTTCACTATTGTTCTTTGAATAATCAGAACTGAATATTTTTT
AGGGAAAATATGGTCTCGTTTTGAGCGAAGTTACAGCATCATCGCCGCCA
GAACTTCAAGGTGTTCGTCTTCTCGCTGATTACTTACAGAACCCTGGCAA
AAAGTATGTCTTAATTCTCGTTGAAAAAAGTTGTGTTTTAGTAAATTTTC
GCTCCTAAATTAAATTCCTTTTGGTTTCAAACACAGAAGTTTCTAGCTTG
TACAATAACACAGTTTCTAGGAGATTTCCCTTCGGTATTTTGCCCAATAT
GTATAATTTCTGCAAGGACTTCGCTGTTGGCCTGAAAAATTGCTATAAAG
GACTCTTCTTATTGAACTAATTGTTTCAAGATTTTTCTATTTAAAAAATT
TTTTTTCTTAGGGAGACTATCATAAAATCAATTGAATCAAAACTGAATGG
AAGTGACTTTAGTGAATATTTTCTCCTTATGGCTAGTGTTATATATTTCC
ATGAAAATGTAAGTCAACTTTGAGTGCTGAAAAAGTAAAATCAGATCCAA
CGGTTGTGCACGCTACAGAAAGCAACCCATTAGATTTGTCTATTCATTTT
ACCACCATTTTGGAGCAGAAAAAGCTTTTGATGCTAACCTGATGGAAGAA
AGTATGAAAATTCCAACCAACTAATTCTTACTTTCTAACTAATTATTTTA
AAACTTTCTTATATTATCCGTTGCCTCTTAAAGTTAGTTAAATTTTTATA
TCCATATTTTAATCAAGGTGATTTTTATTCACTTTTTCCTTCATGTAGGA
TACAGATTCGGCTCTTAGATGTTTGTTTCAATCGACTGCACTAGAATGGT
ATGTAGTTTAGTGTATTTTTCTATTTATTAAGGCTAATGACGTTTTTAAA
CCCTGGGCTAAATTATATCTGTTATCTTTGATCAGAGTTTCTTTAAAGAA
GTCATTGCAGTATTAAAAGGTCAAATGGCGCTACATCAGTACAAGTATGC
GAGGGAAATTACATCCAGCGCTCTCTATGCATTTACACTGCTATCGAGTA
GTGCTTCTATTAGGGTACTTTTATAACGGGTACTTTTCAAATTAAAACTC
TGATTAAAAGATTTTGGTTGGCAGAGATTGAGAAATTCTTCATCCAGGTT
TTATATAAAGCCCATTGGCTAAGACACTTTAAAACTGTTTCATTAATAAA
AGTAGGTTGAAGAGTAAATTCTATCAAATATATCAGGAAAGGAGATGTAG
AGTAAAACTTTCTAGACAAAGTGCTTTGAATTAAAATCCTTACTTATTTT
ATTATAACAGTTCTGCACTCTCTGTACAAATATACATCAGTCTTGACAGA
TTGGACTTAGCAAAGTAAGTGAATATTTGTAGTTACGGAATAACCTCTAA
TGCTTGCACTGTGCTTCCCATTTTTGTGAACAAAAGTATAGTCCTTTTTT
AATTTGAGTTGTATTTTTCTGTTGTTATCTGACCATTTAACATATCTCCT
ACCATTTTGCTAACTGAACATTTTCAAACAAAAGAAAGACTAACTTTCTC
CCCATCTCGCGCTTCACAAGCACAAACATTGAAAAATCCTTTGTCAGCAT
TAGAGGCGCACCCCTTCTTCTACCTTAAAAGAAGAAATTTTAGCGGAAAG
AAAATTTGGCGGATTTCGCGGATTTGGCCAGAATCCGCCAAAATAAGTTC
CCGCCAAAATTTCTTTTTTCCGCCATCCGCCAAATTAAATTCCCGCCAAA
TTAAACTTTTTGAAAATATGATCTCTTTTAAGGTGGTTTTGCATTTTTTT
TGCTGTTTTTACGCCATTTTAAGGATAAATTTTCAGCAAACGCCAAATTA
AATTCCCGCCAAATTTAGTTTTTTCGTCCATCCGCCAAATTAAATTCCCT
CTAAAAAGCTTTTTTGGCCATCCGCCAAATTAAATTCTCACCAAAATTTC
TTCCTTTAAGGTATATCGGAAAAATGATATCTTAAATGTTTACAATAATT
TTTTTCCTTTTTTTTTAGAACTGAAATTGGGAGGATGCAAGTGAGTATTC
AACATGATTAACCTTCAAATTTGACAAAACACCAGATGTTCCCCAGTTCA
TACAAGCCATATTTTAGAAGGACAGGGCAGCGTCCGTTGTTGGCCAAAAA
GAACACTTTTTCCAGTTTTTTTCCGCTAAAAAGGCTGCTTTTAGCAAAAT
GTTCGTTGTTTCAGGAGGGCAGCGTCTGATAACTGGAGGCTAAAAGGGCA
TAAAAATGGCCTGATAAATGTAATTTATGCCCTCTACAAAAAATACAAAC
TTGGACACATTGTAAATGTTGAGTATTATTGATCTTCAACCTTTCTTCGT
ACTCTCTTCAGCAAAATGATGAAGATGCAACTCTTACTCAATTAGCCATG
GCATGGTTCAATCTGGCTGTGGTTTGTTTTTGTCTATTATGTTTTACTCG
TATCATTATCAGAGTTCATGTTCTATACTGCGCTCTTATGGTAAACTTTG
AGCAATGCATGGCTGAGTGGTCTAAGGCATTAAGCCTACAAACCAACTCT
TGAAATGAAATATCATCATCAACTAATATATTATGATATCCTTAATCTGA
TGTCTAAAACACTTGTTGATATTTCAGGGTGGTGAGAAGTGTCAAGATGC
TTATTACATTTTCCAAGAACTCATCGACAAATATTCCAGTACAATCTCCA
TGTTGAATGCACAAGCAACTTGTTACATGAGAATGGGAAAGTTTGAAGAT
GCAGACAGTAATTTACAGGAAGCTTTAGATAGAGTAAGTAAACTTTAAAA
CTTTAAAGGGGAACTTAACATTTTTTTAAGATCATGCTTTTTTTGTCTTC
AAGTACTAGACAATATAGTAGAACTTCGAAAATATATTATTTCCACTCTC
AATCTATTTTTTGGTTGTTTTATTAAGATAAGTTCGCTTTAACGACCAAT
TAAGTTTATTTTTTATGCAATAATAATGGATATTTTTATTATAATGTAAC
AAAGTTCTAGGCGCACGAGGGCCTCTGGAACTGATCGTGATTATACAACG
TATTTTACAATTGTCTTGTGTTGAATCTTTTCGGGTGTTTACTCCATGCA
GTGTTGAGTCTTTCTTTGAAGACTTTGACTGTCTTTGCTTCAGCGACATC
TTTTGGCAATTTATTCCAGGTTGGTATAGTTCGATAAAAGAAGGAATTCG
TTTGTACACCACGGAGTCCATCGCTTCCAAAGTTTGGAATCATCTCAAAG
TTGTGCCTTCTGTTTGGTCGCGTTCGACGGGCTATCTTGTTTGGGATGGT
ATCTTTTTCGTAATAGTTGATGTGCTTGTAAAGTTGGACCATGTCACAAA
AGTGTCTTCTAAACTCGAGCGTAGGAAGATCTAATTCACGCAATCGTTCT
TCATAAGACATATTACGACATTTTTGAACAAGTTTTGTTGCCCGTCTTTG
TACTCCTTCAATCAGATTTACGTGTTTACGTAGAAACGGAGACCATACTG
ACTGAGCGTACTCCAGATGCGGGCGAACAAACGTACAATACAATGTTTTA
AATGTACTTGTACTCATGTTTACAAATCCTCGATTGATTATGCCAAGTAT
CGCGTTTGCTTTTTTGACTTGCTTTGCAATGTGTTCTTCAAATGTAAGTT
CTGAGTCAATGAGGATTCCAAGATCTTTTTCTTCAAAGACGTGTTCCAAT
TGGCGTCCATCTAGGGAATATGGATGAGCATGTTTGATGTTTCCAAACTT
TCCTAGCGTCAGAACGTGACACTTTTCAGGATGGAATTGTAATAGCCAGT
CTTTCGACCATTCTACAAGTGTGTCTATATCATTCTGAAGGGAAACAGAG
TCTTCGATGCAGTTGACTTCTTTGAAGATTTTGGTATCATCAGCAAACAG
TAGGATCAATGAGATGACCTTTTCAGGAAGATCATTGATGTATAGCACGA
ACAGTATTGGTCCCAGTACACTACCCTGTGGAATACCACTCACTACAGGG
TCTGTAGTCGAGAAGGACTGGTTCACTTTTACTGATTGTGTTCGACCTGT
TAGAAATGACGTTATCCATTTTAAGATTGAACCGTTGATGCCATATGCTG
ATAGTTTCTTGCATAGTCGACGGTGGGGTACAGTGTCGAAAGCCTTAGCA
AAATCGAAGTAGATACTATCAACAACGTTTCCTTTCGAGATGCTCTCATA
ACATTTATCCAGATAGTACAAAAGCTGTGTCACGGTTGAACGGTTGTTAA
TGAAGCCATATTGTTTGTTCGATAAAAGATTATGATCGGAAAGGTGCTTC
ATGATGTGTTTCCTCAGTATTGATTCCATTAATTTGCACACTACCGATGT
CAAACTAACAGGTCGATAATTGACTGCCAAATTCTGAGGTCCCTTGTTTT
TGTAGATAGGTGTGACATGTGCCACCTTCCAATCTCGTGGTAATGAGCCT
TCAACTAAAGATTTGTTCATGATTACAGCTAAGGGTAGAGAAAGATAGTC
AGATAATTCCGCTAGTATCCTAGGGTGTATTTCGTCTGGACCGAATGACT
TATTATGGTTGAGCTCTTTCAATTGATTCTGTACCATCTCCTCAGAGATA
TGAATATCTCCGATGGATGAATCAGTTCTCTTTTCAAATGCAGGAAGCTC
ACCTACTGCTTCTTTTGTGAATACACTGCAGAACTGTCGTTGAAGTATAT
TGGCTTTTTCGTGATCTTCATGCTTTAACGATGTTTTGACATTTGGTGAT
TCAAGTAGTGATGAAACTGTACTAGAAGATTTCATCTTGTTACGCACATG
TGACCAGAAGATCTTCGGTTTGGTCTTTGCGTTATCACAAATTCTTTGTT
CGTAGTTCCTGTGAGCTTGTCTCATCAATTTGTTCACTCTGTTTCTTACA
GGGGTGTATTTTGCTCGATTGTATTCTTTTTCTTCGGGCGGTGATTTCAT
CCATTTCCGATGGAGGCGTCTCTTCTCTGCTATTTCTTTCCGAAGTTGAA
CTCCAATAGGTATTTTACCTTTCTTCTTCCAGTTTTGACCACCGATGATC
TTTATGGGTACAAAACGGTTTCGTATATCCAAAATCTTCTTTCGGAAAAG
CTGCCAAAGCTCCTCGGTTGACTTAGAATTAGCCATCTCGGGAAATTGCT
TGTACCAATCATCAGAGTTGAGACCTTGTTTCATTGCTTCAAAGTCTGCG
TCCTCGTACTTGTATCTTTCTGATTTAGGTTTCAATACAGCATCACATTT
GATACTGAAGGTCAAGCAACTATGATCGCTTAAACACAAAGGACTGAGAT
ACTCTAGACATAGAGCTTGGTTAGCTTCACCTGTTAAAATGAGATCGACT
AAAGATGGGTCGTCAGTCCCACGGCATCTGGTTGGTTCGTCTACACTTTG
GTGGAGAAAGGAGTCGCGAAGGGCTTCAAGAAATTTTTCTTCTTTACTTT
CCTCGAGATGTGGCGTCGTCCAATTTTTCCAATTGATTGTTGGGAAGTTA
AAGTCCCCGACAAAGCATTTATGAGAGTATTTGTTGTTTGATGCGATATC
TTTGATTAGATGATTCAACTTGTTGTTATTTTCAGCTGACGTGTCATTGT
TCGTAGGGGAGCGATAGATACAGGAGAAGACCAGGAGATCGTTTCCGGAT
AGACGAATTTCGATTGTGGATGCTTCATTGAAATTGACTTGGTTCATTGA
TTGGTTGACATCGGTGACTAAATGTTTGATCGATGAATGAGCAAGAATAA
TTATCCCGCGACCGATGCCAGTGGTCATGTTCGTATGACTGACACATTTA
TAATGTTTAAGCTCGTGTTCGTGTAGCTCTCGCAGTCCACCGTGCTTTGG
TTTCACCTCACATATCGCAATGATGTGGGGATGATGTTTCTCTACATCAA
GCACAAGTTGTCGCTTCTTCTCGGGTGTTAGCGTGTCGGCGTTGCAATAA
AAGATCCTGATTTCGTTGATCTTTATTTCAACATCATCTACTTGATTTAC
GTTATGGTTTTCTTGATTAATTTTGCGACTGGATAGAGCTCAAAATTATT
TTTTTTTTCTTTGCAGCACAATATTAGGATAAAATAAGTTTTCTTACACA
TTTTAACAAAATATTACTGATTTTTCCTTTATACCTTCTTTTATAGCAAT
ATATGGATCAAATTTTGCATTTTTTTACTAAGTCCATTCGCTTAAAGTGT
TTTCTTTTTTTTGCGTCCACATAAAAACCACCCTCAAGGGAATTAGTTTA
ATTATGCTGACATGGCTCCCACTTACTTGCACAAAAAAGAGTACATACTT
AAAGGAAATAGACCTTTAACACTTCTCCCTTTCAATTGTAGGATAGTAAC
AACCCAGAAACACTTTGTAATATGGCAGTTCTTGCGCAACATCTTGGTAA
AGCACCAGAGGTATGTGATTTTGCAAGAAATGGATTTGCTTTGTTTTCCT
CTATTCATGATATACACCACTGGGGAGTCTTCTAAAAAATTTTGAAATAT
TCCACCCAATACGACGTCGCTTAAACAATAGAAAAAGTGACGTATTGAGT
GGAACAAAAACAGAAAAGTTGCATAATTTCGTGAAGTCATTGCAGTTGTG
CATATTATGAATATTTATTTTGTTTTCAACAAACAGGGTGTAACACCTGC
CAAAGAAATTTTGTTTTTCTCAAAAAATCTAATATTTACAACCACATTTT
TACAATCCTTGAAATAGTGGTAATTCAAGTTCTTTTTTATTTCGATTTCC
TAGGTTAGCAACCGATTCATTTCACAATTACGAGCTGGTCACGATCGCCA
TTGCTTCACCAAAGACTACCTGAAAAAGGTTACACGTTTTTTTTATAAGA
ACATCCCAAATTTTTGAAGCCTTCGGATGCTCTCAACTTTTTCAGTTTCA
AGCCTAAAAATGTTCTTATATTGACCATTTGTGGATATTTTTGTCCTAAG
AAGTATGGTGTTTTTGAGTCCATAAAGCCTTAGAAAGTTCTTAACTTGTT
CTTAACATTTTGACTATCGAAGCCTTATGCTCTTATATAGTTTGTTCTTA
TTAAAAAGGTTGTTCATAGCTCTTTAATTCCTTGTGTAAAAAATTGTATC
ATCTTTTGAAAGGGTTTCATAAAGTCTGTCTCAATATAATCTGCAGCGGA
GACTAAAAAGAAAATTGATTTTTTCTTCGTTGTTTTTCGTCTTATTTTTT
CCGAATTTATTTGATTATTTTCTATTTCATAATATATCCAACTTATTATC
TTTTCAACAAGCACGAAACAACTCGAATTCCTGCGAATTCTATTAAAAGC
CTTCTTTGTCTTCACTGCAGATCATATTGAGACAGACTTTAAATATTTAG
GATTTGATTGTTTTCTTTTATGAGGCAAAATCAAAATTGTTCTGGCTGAT
TTCGCTGTTGTCCCCAAATAATGCATATTTTTACAAATATTTTTTGTCAA
TTTGATTTTTAGGAAGCAGATTTTGATCGTATCGTTGAAAGTTACGCTGC
ATCGGCAAAAGCTCATTAA Coding sequence (CDS) from alignment at sc0000079_pilon:403310..411028- >XLOC_038776 ID=XLOC_038776|Name=XLOC_038776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000079_pilon:403310..411028- (Clytia hemisphaerica_ch_hm2_pilon) CAGCCTTCATCATCTGACCTGAGAGTGGAACGAGATGTATTCTTATATAG AGCATACATTGCACAGCAGCCTTCATCATCTGACCTGAGAGTGGAACGAG ATGTATTCTTATATAGAGCATACATTGCACAGGGAAAATATGGTCTCGTT TTGAGCGAAGTTACAGCATCATCGCCGCCAGAACTTCAAGGTGTTCGTCT TCTCGCTGATTACTTACAGAACCCTGGCAAAAAGGAAAATATGGTCTCGT TTTGAGCGAAGTTACAGCATCATCGCCGCCAGAACTTCAAGGTGTTCGTC TTCTCGCTGATTACTTACAGAACCCTGGCAAAAAGGAGACTATCATAAAA TCAATTGAATCAAAACTGAATGGAAGTGACTTTAGTGAATATTTTCTCCT TATGGCTAGTGTTATATATTTCCATGAAAATGGAGACTATCATAAAATCA ATTGAATCAAAACTGAATGGAAGTGACTTTAGTGAATATTTTCTCCTTAT GGCTAGTGTTATATATTTCCATGAAAATGATACAGATTCGGCTCTTAGAT GTTTGTTTCAATCGACTGCACTAGAATGGATACAGATTCGGCTCTTAGAT GTTTGTTTCAATCGACTGCACTAGAATGTTCTGCACTCTCTGTACAAATA TACATCAGTCTTGACAGATTGGACTTAGCAAATTCTGCACTCTCTGTACA AATATACATCAGTCTTGACAGATTGGACTTAGCAAAAACTGAAATTGGGA GGATGCAAAACTGAAATTGGGAGGATGCAACAAAATGATGAAGATGCAAC TCTTACTCAATTAGCCATGGCATGGTTCAATCTGGCTGTGCAAAATGATG AAGATGCAACTCTTACTCAATTAGCCATGGCATGGTTCAATCTGGCTGTG GGTGGTGAGAAGTGTCAAGATGCTTATTACATTTTCCAAGAACTCATCGA CAAATATTCCAGTACAATCTCCATGTTGAATGCACAAGCAACTTGTTACA TGAGAATGGGAAAGTTTGAAGATGCAGACAGTAATTTACAGGAAGCTTTA GATAGAGGTGGTGAGAAGTGTCAAGATGCTTATTACATTTTCCAAGAACT CATCGACAAATATTCCAGTACAATCTCCATGTTGAATGCACAAGCAACTT GTTACATGAGAATGGGAAAGTTTGAAGATGCAGACAGTAATTTACAGGAA GCTTTAGATAGAGATAGTAACAACCCAGAAACACTTTGTAATATGGCAGT TCTTGCGCAACATCTTGGTAAAGCACCAGAGGATAGTAACAACCCAGAAA CACTTTGTAATATGGCAGTTCTTGCGCAACATCTTGGTAAAGCACCAGAG GTTAGCAACCGATTCATTTCACAATTACGAGCTGGTCACGATCGCCATTG CTTCACCAAAGACTACCTGAAAAAGGTTAGCAACCGATTCATTTCACAAT TACGAGCTGGTCACGATCGCCATTGCTTCACCAAAGACTACCTGAAAAAG GAAGCAGATTTTGATCGTATCGTTGAAAGTTACGCTGCATCGGCAAAAGC TCATTAAGAAGCAGATTTTGATCGTATCGTTGAAAGTTACGCTGCATCGG CAAAAGCTCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000079_pilon | genome | sc0000079_pilon:403310..411028 - |
Properties
| Property Name | Value |
| Aaloc | 847-903:58 |
| Aaloc | 772-846:767 |
| Aaloc | 703-771:1179 |
| Aaloc | 547-702:4893 |
| Aaloc | 487-546:5159 |
| Aaloc | 466-486:5501 |
| Aaloc | 412-462:6209 |
| Aaloc | 361-408:6722 |
| Aaloc | 265-360:7108 |
| Aaloc | 163-261:7468 |
| Aaloc | 97-162:7720 |
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