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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:343298..348412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038774 ID=XLOC_038774|Name=XLOC_038774|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5115bp|location=Sequence derived from alignment at sc0000079_pilon:343298..348412- (Clytia hemisphaerica_ch_hm2_pilon)
GGACAAAAACGAGGAAATCAAGGAGGAGGTAGTGATGGTGGCGGTAAAAA
GATGAGAGCTGATTCAATCACTTTACGCTTTTTATTACAAAGTAAAGTAA
GTGTCATTTTAGGCTTCATTTCTTATCCGAATGCAGATTAAAGTCATTTG
AATGTCCTGAAATTTTGCACTTTAAGCCATTAGCCAAAGTATTTTGATAA
GGATTTTTTTCTTTTTATAGCATGCTGGTGGAATTATTGGCAAAGGAGGA
CAAACAATCAAAAGACTGAGATCAGAGGTTAGTTATGCTAACTAGGGTGT
ACTCTTTTTGGAAAACTATTGTCTTTATACTCTTGTGGGTCAATTGTCCC
TTTCATTCCTTGATTTGTTACGGAGAATTTGTGATTCTTGAATGTGTTAC
ATAATTTTTAAAGCAATTGAAATATTTTCCAGTCTGTTTCGTATGTTAAC
TGTGTTTTGTTTTCCTTTTCCCTTATCGCAACCTCACTCCTTCCAATCCA
TACTACCCAATGATGATTACCCCGATATGTTGCTGGCTCCCTCCTTCCTG
TTGCTACTATATTTTCCTAACAATATAGTACAATGCCACGGTCAGTGTCC
CTGATACCAACGCACCGGAGCGGTAGGTTCCCATCACTTCCCATTTCATT
CCTTCAGGCTGCATCATAGGGTAGCTTATGTCGGGGGAAAAAGGAAATTG
TTATCACTGCTGCATTCTGTCACAACCCTCCTCTCAAAGAAACTAGAGGA
AAGCTCAGGTATTTGCAACAAACACAGATTTATTTAAGAACTATGGTACT
AGACAAATTCTTCAGTTATATAAACACAATGTTCCTATCATGTTAAAGGG
GGCTGTGTCAGTCACTTACAAATAGTTTCTTTAAGTTATGATGCAGCCTG
ATTTTCATAAACTCTAAACCTTTTTTACAAAATTTGATAAAAAGTTTGGG
TTTGCTAGCTTTTGACCAGGTTCTGGCAAAAACCTGGAAAAGTCAATTTT
AAACATAAACGCTTTATTCTTGGGGGTTAGTTAACCTTTTTGCACCATGC
AAAACAACAAATTTAAATTGGCGGGAGAAAATGTTACTTTAGTTTAAATA
TTTTTTAAAATTTTCGGTTGGGCCAGTTGAAATGTAAGCTTCGCTTTCCT
GGGGCTCAACTTCCTATTTGGAATATGTTGTTTGATTAGAAGAAAACTTT
CTAGCAGCTAGAGAAACAGTTTAGCAAAAGTGTGCAGTCATGACATGACT
AAAGTGACCAAAAAATAGTTAGTTTCAGACAAGAACATAGTAAATCATGA
CTGAAATCATGCTTCATATTTTTCAGGGTTTTGTCAATTGCAGCATCACA
AGAAAGTGCAATCAGTGTTTTGCGTGAATGTTTACCATTGTGTCATGAGG
TAAGTTATATCTGGTCAGATATTGTGCTGTTTGCACCTTTTTGACCGTAG
CCGCCATTGCTACCATCCTAAAACTGTACTGTCTTTTGTGAACCTAAAGA
AAATAGAAAAAAGTGTAAAAAAATGATTGCATTGAGTTTAGGATGGTAAA
TTAAATAAAAAAAGTGGCACACGCCTGACCGTGCAACTATGGTTGAAAAG
GTGTATTGATTTTGATTAAATTTCTTTTTTGCTAAAATCCTAACTTGATC
TTAAATGGTGTAATTTTAGGGATACTTTGAAGTTTCAGTTTCGATAGTTA
GTTTTTCCTTCTTGTTTTCAGCCACCATACCCAATCACTGGAAATAGTGA
AGGAAACAGTGGTGGTAATAATCTTGAAGTCAACTTTCTCGTCCACTCAA
GTCAAGTCGGAGGAGTCATTGGGCGGGCTGGTAGCAACATCAAAGAGCTC
AGAGAGGTAGGGCATCTCAAGCCAAAATTTTCTCTTCTTTATTTGAATGT
GTCTAATGGTTTTGCAAAGATTGAACTCCTGCAATGTTCTTACAGGTTCC
TGACCCAAATTCTGTTTGAACAGGTATGGAATCCAGAGAAATTTTTTGTT
TTCAAGTCAAAACCTTTCTGATTTCAAAACTTAAACTTTTTCTTCAGACA
ACTGGTACAAGTATTAAAGTTTTCCAAGAGTGCTTACCAAATTCAACAGA
ACGTGTTGTAGCCATCGGAGCACCAAATGAAGATGGTATTATCGATGTCA
TCCATCGTGTCCTGGCCATCATGCAAGAACAACCAATCAAAGGAAACATT
GCTTTATATGACCCTTCCATGGAACCTTGGGATCAAGGTCAGCAAGGTAG
GGAGAGATGTCTTTTAAAACCTTCTCCATTAAATTTATTATAATCATCAG
CTTTGTTGTTGATACTTGTCTGGAATTAAAATAATATGTTAACTTATTTA
CGAAAATAAAGCTTTGTGATCTTTTCTTCAACATATTTGGATAAAATGAG
GGTTTCAAATGGGCCAGACAAGTAGCCTGATTAGGGTTGCTTAACCTGAA
ATTTGTGATTGTATCTGTATCTGTAGGAATAGATTGTTTTCATTGTTTTC
GGAAGACTAATATGATAGCGTTGTACATCAAAAAATGATAAAACAGTTTA
CTATCAAGAAATAATAAAACACAAAAATTCTACTCAATGTTTTCAGGGTA
CTGTTTTTTTTTTTAATGTATTGATCGATTTATAGGTGGATATGGAGGCG
GTCAAATGCATGGCGGTCGTGGTGGTGGCCGCGGTGGTATGAGAGGAGGA
CGTGGTGGTGGTCGAGGTGGAGGCCGTGGAGGTTTCAATAACCAACAAGG
AGGCTTCAATAATCAACAAGGTGGCTTCAATGGACCTCCACAAGTAAGTC
CATTTTACTTTGAATTAATAAACAAAAGGGCCTCTTTGCCTGCATTTTCA
CATAATGTTAATATGATAAAGAAACAACAGTCCTTAGCCTTCCTTAGCTT
GCAGCAGGCTATTTCTTATCTCTTATGAAGAATCTACGTTTCCAGTTTAC
TATTTCCCATAATTTCCTACAAAAGATCAATTACTTTGCTGAAATTTCTT
TTTTCTTTGATCGCTCGAGTATCTTGACACATTCTTCACTCTACCCTATA
TTTCAGGATCAAGGTAGTTTCGGTGGATTTGGTGGTGGACAGCAAGACTT
TGGAGGAGACTTTAATCAAGGTAGTTTTACTAATATTTCCAAAAAATTTT
ATTCAGGCTCAATTGGATTATACTAGCAAGAGCTTTCAAATAAAAAAAAT
GAATTACAGTAAATAGAAATGGTCATGTCTCCATTTTGTTAATAAAACAA
ATCCTGTCTGTCAAATAACATCCGCTGGCAGTTCTGGTTGGGCCAGTCTT
TGATCATAGAAGCAATAAAAAGATCCATAGATGATAGTCAAGTATATCTT
CCTAGATTGCAATTCTCGTAAAACCTGCGGTACAAGCTGATTCAAATTCT
TTCTTCACGTAAACAGGTGACGGTGGAAATTATGGTAAAGGAAACGTTGA
GACGACTCAAGTCACCATTCCTAATGATGTACGTATTTTTTTTTGCCTTT
TAATTGTTTTGATTCACCCTTAGTCATGGTGAAACACTCAACTGTATGTG
GTGTTGATAATTAATTTATAGGCCCTATTTACGTCGACCCTAATTTAGCG
CCAGTCCTTATTTTTCCATTTTTAGCCCGGCCCTAATTTAATTCCACTTC
CTTACGCTGGCCCTATTTACGTCAGCGACAAAAAATAACACCATAAAAAA
ACACAAAGAATGAAAAAACTCAATTAAACTCATCAATTTTTAGCTTGCTG
GTGCCATTATTGGTAAAGGAGGAGAAAGAATCAGGAATATCAGGTAATTT
GTTTGAGTTTTTAAAGTAGTTTAACAAAGGGTTATCTTGTAATGTTCTTT
GTTGATGTCTAATGCCTTTTACTCCAGTTAATTGTTTTGCCCTTTCAACA
CTACTTTCATTGTTATTTTTTCTCTAGTTAGTGAGGGGAAAAATTTGTAT
CTAAGCTACCTAGCTACATTTTTTTTGAATTGCTATTTTCCAGACAAAGA
TCAGGAGCAGACATCAAGATTCAAGACCCATTACCAGGAAAAGCTGATCG
TGTCATCACCATCGCTGGAAATACAGAACAAATCCAATACGGTCAATTCC
TAATGCAGCAGAGGTACCTTAACCTTTATGTGATAAAATCTCCTTTCATA
GTTCCCAAAGTTTCTCAGCCTTACTTCCAATATGAGAGAAATTTCCTCTT
GCTGTGGCATAGTGGTCGCTGACCTTGGTTACTGCACAGGCAATTGAGGT
TCGATTCCCACTCGCAGCGGTTCACTTGGCAAGTGAACAAACCTTTTCCC
AGGTCAACCCATGCTATGTTAGGGGAATTGGGTAGCCAGTCCAAGGTGCT
GACTTTTTGATTGCGTCTATAAATGCGAAAATTGGTCTTAGAGCCTCCTG
CAACTCAACCAGAAAGAAATGCTTGCATCTTATAAGAACATGAAAGTCTA
TCTCTCCCTACCACTTCATTTGACCTGGCCATTACTTGGTAGGTAATGGT
CTCATAAACCTATTTCCAAGTACTCTATATCCTGGCCTTAAACTTTCCAA
ACATTATTTCTTCTATATTTCTGTCCTACCTTTCACGTACTCAGTCCCAA
ATACTAGCACTGGCCATGAAGGGCTTCATTCCTCCCAATGACACGGGCTT
GAAAGAAAACTCACCCTACCCACTAACAAGTACTAATTTTAAGCTACTAG
GTACTTGTTTTGCCTACCCCTATCTCAGAAAGTCCCATAGTACTACAAGG
TTGTTAAATCTTTTAAAGCATAATGTCATTTGTTACAACAGACCTATGAA
CAACTTGTATCCCCTCTCACAATCTCATGGCTATGAGCGTATAACACCCT
TTAACTATGTCTGAATAGTTTATTCATTGAATGAAAGTCTTTATCCCTAC
CGGTCTAAACTCTTGTTCCCACGCAATGGAAACGCTAGTACCCTTGACCC
ACTACCTGACCCTACCTGACCCAAATTTCATAACAGTTTCACATAGCTTT
TCATGTCAAAAATCATACCATCGCGAGACTATGTCCATTAGTAGACAACT
TTAAACATAAAACGCAACAATTTCTTTTTTGCAGCGTTCGCCAGTTTTCT
GGAAAACAATCATAG Coding sequence (CDS) from alignment at sc0000079_pilon:343298..348412- >XLOC_038774 ID=XLOC_038774|Name=XLOC_038774|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2178bp|location=Sequence derived from alignment at sc0000079_pilon:343298..348412- (Clytia hemisphaerica_ch_hm2_pilon)
GGACAAAAACGAGGAAATCAAGGAGGAGGTAGTGATGGTGGCGGTAAAAA
GATGAGAGCTGATTCAATCACTTTACGCTTTTTATTACAAAGTAAAGGAC
AAAAACGAGGAAATCAAGGAGGAGGTAGTGATGGTGGCGGTAAAAAGATG
AGAGCTGATTCAATCACTTTACGCTTTTTATTACAAAGTAAACATGCTGG
TGGAATTATTGGCAAAGGAGGACAAACAATCAAAAGACTGAGATCAGAGC
ATGCTGGTGGAATTATTGGCAAAGGAGGACAAACAATCAAAAGACTGAGA
TCAGAGTACAATGCCACGGTCAGTGTCCCTGATACCAACGCACCGGAGCG
TACAATGCCACGGTCAGTGTCCCTGATACCAACGCACCGGAGCGGGTTTT
GTCAATTGCAGCATCACAAGAAAGTGCAATCAGTGTTTTGCGTGAATGTT
TACCATTGTGTCATGAGGGTTTTGTCAATTGCAGCATCACAAGAAAGTGC
AATCAGTGTTTTGCGTGAATGTTTACCATTGTGTCATGAGCCACCATACC
CAATCACTGGAAATAGTGAAGGAAACAGTGGTGGTAATAATCTTGAAGTC
AACTTTCTCGTCCACTCAAGTCAAGTCGGAGGAGTCATTGGGCGGGCTGG
TAGCAACATCAAAGAGCTCAGAGAGCCACCATACCCAATCACTGGAAATA
GTGAAGGAAACAGTGGTGGTAATAATCTTGAAGTCAACTTTCTCGTCCAC
TCAAGTCAAGTCGGAGGAGTCATTGGGCGGGCTGGTAGCAACATCAAAGA
GCTCAGAGAGACAACTGGTACAAGTATTAAAGTTTTCCAAGAGTGCTTAC
CAAATTCAACAGAACGTGTTGTAGCCATCGGAGCACCAAATGAAGATGGT
ATTATCGATGTCATCCATCGTGTCCTGGCCATCATGCAAGAACAACCAAT
CAAAGGAAACATTGCTTTATATGACCCTTCCATGGAACCTTGGGATCAAG
GTCAGCAAGACAACTGGTACAAGTATTAAAGTTTTCCAAGAGTGCTTACC
AAATTCAACAGAACGTGTTGTAGCCATCGGAGCACCAAATGAAGATGGTA
TTATCGATGTCATCCATCGTGTCCTGGCCATCATGCAAGAACAACCAATC
AAAGGAAACATTGCTTTATATGACCCTTCCATGGAACCTTGGGATCAAGG
TCAGCAAGGTGGATATGGAGGCGGTCAAATGCATGGCGGTCGTGGTGGTG
GCCGCGGTGGTATGAGAGGAGGACGTGGTGGTGGTCGAGGTGGAGGCCGT
GGAGGTTTCAATAACCAACAAGGAGGCTTCAATAATCAACAAGGTGGCTT
CAATGGACCTCCACAAGTGGATATGGAGGCGGTCAAATGCATGGCGGTCG
TGGTGGTGGCCGCGGTGGTATGAGAGGAGGACGTGGTGGTGGTCGAGGTG
GAGGCCGTGGAGGTTTCAATAACCAACAAGGAGGCTTCAATAATCAACAA
GGTGGCTTCAATGGACCTCCACAAGATCAAGGTAGTTTCGGTGGATTTGG
TGGTGGACAGCAAGACTTTGGAGGAGACTTTAATCAAGGATCAAGGTAGT
TTCGGTGGATTTGGTGGTGGACAGCAAGACTTTGGAGGAGACTTTAATCA
AGGTGACGGTGGAAATTATGGTAAAGGAAACGTTGAGACGACTCAAGTCA
CCATTCCTAATGATGTGACGGTGGAAATTATGGTAAAGGAAACGTTGAGA
CGACTCAAGTCACCATTCCTAATGATCTTGCTGGTGCCATTATTGGTAAA
GGAGGAGAAAGAATCAGGAATATCAGCTTGCTGGTGCCATTATTGGTAAA
GGAGGAGAAAGAATCAGGAATATCAGACAAAGATCAGGAGCAGACATCAA
GATTCAAGACCCATTACCAGGAAAAGCTGATCGTGTCATCACCATCGCTG
GAAATACAGAACAAATCCAATACGGTCAATTCCTAATGCAGCAGAGACAA
AGATCAGGAGCAGACATCAAGATTCAAGACCCATTACCAGGAAAAGCTGA
TCGTGTCATCACCATCGCTGGAAATACAGAACAAATCCAATACGGTCAAT
TCCTAATGCAGCAGAGCGTTCGCCAGTTTTCTGGAAAACAATCATAGCGT
TCGCCAGTTTTCTGGAAAACAATCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:343298..348412 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1072-1101:31 |
| Aaloc | 952-1068:1122 |
| Aaloc | 901-948:1373 |
| Aaloc | 841-900:1698 |
| Aaloc | 775-837:2060 |
| Aaloc | 619-774:2479 |
| Aaloc | 418-615:3069 |
| Aaloc | 283-417:3395 |
| Aaloc | 211-282:3789 |
| Aaloc | 166-207:4538 |
| Aaloc | 109-165:4896 |
| Aaloc | 13-108:5116 |
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