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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:278254..282389- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038771 ID=XLOC_038771|Name=XLOC_038771|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4136bp|location=Sequence derived from alignment at sc0000079_pilon:278254..282389- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAGTTATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGATT
TGAACTTAAGAATACACTTCCAACTCATAATGATGATAATACATCAGAAA
AAATTGTTATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGTT
ATAATATTTTATTGGTATCGCAGTAAACAAGTGCCTCTTGGTTATCAAAG
GGTAAAGACAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAAC
CAAAACTCACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGAT
GAGAGACGAAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTGT
CAAAGAGCAAGAAAATATAGATGTAACCACTCCTACAACACCCACAACAC
CAATGACACCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTTA
TCATCTAACCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAAA
ATCTATATCACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAATG
CTGACGGTTTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATTT
TTGCAAAGTCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTGG
AAAAATCAAATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTAA
CAATAAAGGTACTGTATATATAATTTAAGATTTCATATTTATCCTGTAAC
TTTTAATAAGTAGGGCTTTGCTCTTTGTGTTTTTTTTTTTGATTTCCAGC
GATTGCTTTACAATTTTTCCATTGTCTCAAACTTTCAGATTATAGCTTCC
ATTTTTGTTTTTAGATTCTGGACTTCATTGATTTACCATTATCCAGAGAA
ACTGGTATTTCTGTTCCCTTTGTGAAAGTCTATTTGTATCCACAAAATGC
TCATGCTATGCCACTGACAGAAGTTTCCAAGAACCTTGGTGCTTTTAAAT
TAGAAATTTTAAGCTATCCTAAAGAAAATTCATGTACATTCTATGGCTGT
CCAATCAACAAACTTTGTAGTTCAGCAATCAAATTTGTTATTTTGGATTA
TGATCGTTTTTCAAGAAGTGAGTTTGTTGCGGATAGTGTTATTTTGTTAG
ACGAAGTCTCTCTAGAAGGTGAAGCAATTACAAAGCATCTCAATGTACGT
CGAACTAATGTGGTAAGATTTTATTTTTTGTATCATATTTAGATATCCGT
GTAAAAAGTTGTTATATGGAAAAAGTTCTCTGTAATTGCCACCAGTTTAC
ACTACTAATAATGTAACAAAGAAAACATGGCAATAAGTTATGAGGATGCC
TATTAATGATCAATAATTTTTGTTCTGTTTTTATTTTAGAAGAAGTTCTT
TTCTCCAGGTTTTTCTTCGGTGTAAAGTCAAACATTTTGGGTCTTCGATT
TACATAACATGATCTAACACTTGATTTATTTTAGGATACTGATATGGGTA
GTTTGCTGGTATCTCTATGTTATCAACCTGCTGTTTCAAGAATGTGCATT
GTTGTACTCAAAGCAAGTGGTTTGCCATACCATGGAGAGGGCAGTAGTCA
TGCTCCAGGTATGTATGCATTCTTTCAGTGAGTTTTAAGTGGTTTTCCCT
TACAATACAAAAATAGTCTTAGCAATGTTTTTTGTCATAGACTTTGGCCA
TTTCTTTTTGTTTAAAATCTATGAAGTAGCCTGTTTTTGGTTTTAAGGAG
GAATATTTTTGAGTTTTTATTTACAAACAAAACAGTTTTCAATCATGTTA
TTATTATCTATGAAAACAGATAAATCGACTGAGATGTTGTTAAGTTTTAT
ACAGGATAATCACTCCTTAATCATATCAATTTCCGTATCACTTGTTATCT
TGTTTCCAGAAGGAAAACTATTTAATTTGTGATTTCCTTTAAATCAGTTT
AAATAGCTGTCTGCCGTCTGTAATGTATCTCTATAAGCAGTTGTTTTCAA
TGATAATATATAAACATAAGGGTTTTATAAATCAATTTTAAGTATAACAG
TTTAAAATGTTTTGCAAAAAAGACAAAATGTCACGTAAGAAAACAGTGAA
ATGTTGCAGGATTAGAGGTGGTAACTCGTCCATCTTTTTTCATAGCATAT
TTATGAGAATTAGTCAAACACGCTTAGCCCACTTGTACTCTCATTGATCC
ATTTCTCTTATCAATTAATGGTTTTTGAATGCCAATATTCACTTTTTCTA
TGCATTAATTAACAGATTAAAAAGGCTTATATCAATCAAATGATAGAGCT
CTTTAAAAACAGCTTGATAAGCCTACACAAGCTTACGTTTTTTTTTCTGT
AGTGCATTACTCTCCTATTCATTGAAATTAAAAAATAGTCAAACATTTTT
AATAAAGGTTTTAGTTTTACATAAGTGTTCCTGTTTCATACCAGACACAT
GTCTCATATCAGGACAGTGTCTCCTTATTGTTATGTTGTGCTTTTTTTTA
ATAAACAACAAACTGTTTTTATTTTCCTTGTTCTGATCAATCTTGCTTCA
TATCTATGTCAATTCAACCTGAAAAAATTAAAATTGATGAGTAAGCAAAG
ATATCACTCTTATTGAAGTACAAAACCTTTAAAATTATAATCCCTGGGCA
GATATCAATAAAATCATAGTTTTTATCCAACCCATTCACAACCCTAGTAT
TGCCTTTTCTGAAACTTAAAGTTCTCAATATTTCTAAAGGATAGGTTTCG
TTTAAAATGTGCAATTGTAGTTTATCGATAAATACTCAAATCCAGCACTA
ATCAAGTTCATAATTTACCTACCCATTATTGATCATTCCCATCAATACCG
CCTTTCTCAATATTCAAGGAATTTTACTTATGGTGGGCAAAATTTTCAGT
CTAATTTGAATAATTTGAAGTGGAAGTTATCAATATTTAAAGCGGTCAAA
ACAATATTTTTTGCAATAACTTCTACGGGCCATTCCATTTTATAACCATA
CAGAGGGGCTGATAGTGATAAACATTTCCAAGGGGGTAATTCGAGAAGAA
TTTCTAGGAGGTGTAAAGAAGTGTTTATTTGTGTTTCCAGGGGGTAAAAA
ATTATTCTTAAACTTTCCAGGGGATAAAGGACTGATATTAGTTCGTCCTC
CCTTCACTTTAAGTCATGAAAAGAATTTTTCCAGGTTCCTTTTTGCAAAT
TTTCTACCCCCCCCCCAGTATGAAAAAAGCCCAATTTCAGGCGGTGGTTA
CACGTAGCCGGGTTGAAATTCACCCCGAGGTGAAATGGAAAAATAATTCA
CCCCGGGGTGAAAATCATTTTGGGATACACGTCGGCGAAAGGCGGGGTGA
AAACCCTTTTTTTCAGTTCGGGGTGAAAATTTTAACTTATTTTCACCCCA
GCGTGAAAACGTAAAGTCTGTCCACGATAAGTGTGCACTCTTTTTTCTTT
TACCTATAACTTTTGAAGAAATTCTTCAATCTTTATAAATTTGGTATCGT
TAGAGAGATATTTGTGAGTGGAACAATTTGAAATAAAAAAATCTTTAAAA
AAATTCTAAAAATGAAGGTGATAATAAAGAAGAAAAAAATGAAGATCTCA
ACCCCGGGGTGAGTTCAACCCGCTTAAAAACGGCTTCACCCCGCCTAAAT
ACGTGTATACAGAAACAGTGTTTTCTTTATAGACCGGAGTGAAATTCACC
CCGGCTAGGAAATTCACCCCGGCTACGTGTAACCGCCGCCTCAGATGACT
TTTTAAAGTGACGTTTCACCCCTATAAAGATGAAAATTGTAACTATTTCA
TTTTTTTCATCCCCAGATCATTTTGTTAAAATCAGTCTGATGAGAAACAA
TACAGTGCTGGATAAACGGAGGACAAGAGTCATCAAAAAGACAATATGTC
CTGTTTTCAACGAAAGATTAGTGTTTCCAATTGATAACCAAAGTATGCGA
AGCCTGGTCTTTGTCTTTGATATTATACGTTACGATTCAAAGATCAAACA
GGAAAAGATTGCAAATGTTGTACTTGGTAACCATAGCAATACCAGACAAG
TGACACCTCATGAAATCCAACATTTCAATGAAATGCTTGAATCTCCACAA
AGACAAATAGCTGAGTGGCATAAGTTGGTGGTATGA Coding sequence (CDS) from alignment at sc0000079_pilon:278254..282389- >XLOC_038771 ID=XLOC_038771|Name=XLOC_038771|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000079_pilon:278254..282389- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAGTTATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGATT
TGAACTTAAGAATACACTTCCAACTCATAATGATGATAATACATCAGAAA
AAATTGTTATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGTT
ATAATATTTTATTGGTATCGCAGTAAACAAGTGCCTCTTGGTTATCAAAG
GGTAAAGACAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAAC
CAAAACTCACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGAT
GAGAGACGAAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTGT
CAAAGAGCAAGAAAATATAGATGTAACCACTCCTACAACACCCACAACAC
CAATGACACCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTTA
TCATCTAACCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAAA
ATCTATATCACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAATG
CTGACGGTTTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATTT
TTGCAAAGTCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTGG
AAAAATCAAATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTAA
CAATAAAGAAAAAAGTTATGTCATATCTGCAAAAGAATGAAAGTCATCAT
CAAAGATTTGAACTTAAGAATACACTTCCAACTCATAATGATGATAATAC
ATCAGAAAAAATTGTTATTAGTTTGAGTATTACTGTGCTGATTCTTGCAA
TAATTGTTATAATATTTTATTGGTATCGCAGTAAACAAGTGCCTCTTGGT
TATCAAAGGGTAAAGACAAATAGTGCTATTAGCTCATCTTATAATTCACA
CCACAAACCAAAACTCACTTTGAAATTACCTCAAGTTTCTGTGTCAAATT
TTGAGGATGAGAGACGAAAATCTATGGGGAGCACAATAGAACGACATTTT
TTATCTGTCAAAGAGCAAGAAAATATAGATGTAACCACTCCTACAACACC
CACAACACCAATGACACCAATGACACCTTTATCACCATTAACTCCACTTT
CACCGTTATCATCTAACCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCT
TTGTCAAAATCTATATCACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGA
CATTAATGCTGACGGTTTATGGAGGAATGCTGTGCGGAAAGCTACAAATT
CTCAATTTTTGCAAAGTCACCCTAAACAAAATAAACGAATATCTTATTGT
GCCAGTGGAAAAATCAAATTTTCTTTGGTTTATGATACTCAAAATCAAAA
AGAACTAACAATAAAGATTCTGGACTTCATTGATTTACCATTATCCAGAG
AAACTGGTATTTCTGTTCCCTTTGTGAAAGTCTATTTGTATCCACAAAAT
GCTCATGCTATGCCACTGACAGAAGTTTCCAAGAACCTTGGTGCTTTTAA
ATTAGAAATTTTAAGCTATCCTAAAGAAAATTCATGTACATTCTATGGCT
GTCCAATCAACAAACTTTGTAGTTCAGCAATCAAATTTGTTATTTTGGAT
TATGATCGTTTTTCAAGAAGTGAGTTTGTTGCGGATAGTGTTATTTTGTT
AGACGAAGTCTCTCTAGAAGGTGAAGCAATTACAAAGCATCTCAATGTAC
GTCGAACTAATGTGATTCTGGACTTCATTGATTTACCATTATCCAGAGAA
ACTGGTATTTCTGTTCCCTTTGTGAAAGTCTATTTGTATCCACAAAATGC
TCATGCTATGCCACTGACAGAAGTTTCCAAGAACCTTGGTGCTTTTAAAT
TAGAAATTTTAAGCTATCCTAAAGAAAATTCATGTACATTCTATGGCTGT
CCAATCAACAAACTTTGTAGTTCAGCAATCAAATTTGTTATTTTGGATTA
TGATCGTTTTTCAAGAAGTGAGTTTGTTGCGGATAGTGTTATTTTGTTAG
ACGAAGTCTCTCTAGAAGGTGAAGCAATTACAAAGCATCTCAATGTACGT
CGAACTAATGTGGATACTGATATGGGTAGTTTGCTGGTATCTCTATGTTA
TCAACCTGCTGTTTCAAGAATGTGCATTGTTGTACTCAAAGCAAGTGGTT
TGCCATACCATGGAGAGGGCAGTAGTCATGCTCCAGGATACTGATATGGG
TAGTTTGCTGGTATCTCTATGTTATCAACCTGCTGTTTCAAGAATGTGCA
TTGTTGTACTCAAAGCAAGTGGTTTGCCATACCATGGAGAGGGCAGTAGT
CATGCTCCAGATCATTTTGTTAAAATCAGTCTGATGAGAAACAATACAGT
GCTGGATAAACGGAGGACAAGAGTCATCAAAAAGACAATATGTCCTGTTT
TCAACGAAAGATTAGTGTTTCCAATTGATAACCAAAGTATGCGAAGCCTG
GTCTTTGTCTTTGATATTATACGTTACGATTCAAAGATCAAACAGGAAAA
GATTGCAAATGTTGTACTTGGTAACCATAGCAATACCAGACAAGTGACAC
CTCATGAAATCCAACATTTCAATGAAATGCTTGAATCTCCACAAAGACAA
ATAGCTGAGTGGCATAAGTTGGTGGTATGAATCATTTTGTTAAAATCAGT
CTGATGAGAAACAATACAGTGCTGGATAAACGGAGGACAAGAGTCATCAA
AAAGACAATATGTCCTGTTTTCAACGAAAGATTAGTGTTTCCAATTGATA
ACCAAAGTATGCGAAGCCTGGTCTTTGTCTTTGATATTATACGTTACGAT
TCAAAGATCAAACAGGAAAAGATTGCAAATGTTGTACTTGGTAACCATAG
CAATACCAGACAAGTGACACCTCATGAAATCCAACATTTCAATGAAATGC
TTGAATCTCCACAAAGACAAATAGCTGAGTGGCATAAGTTGGTGGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:278254..282389 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1183-1500:319 |
| Aaloc | 1057-1179:2653 |
| Aaloc | 709-1056:3273 |
| Aaloc | 1-708:4137 |
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