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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000524_pilon:70562..76359- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038689 ID=XLOC_038689|Name=XLOC_038689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5798bp|location=Sequence derived from alignment at sc0000524_pilon:70562..76359- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTTTACTTCTTGATATTTACTGCAGTTGTTTTAGTTTACGGTAA
GTTTGAAATCCCAACCCGTTTCAATCTTTTGTCAAGTTATCAAGATTTTG
ATTTTGGCGTCCCCTAAGAAAATCAAATGTTTTTGGAAAAGTTATGCTAT
ATCCGAGTTGTAAAAGAGTAAAGGGGCGCTGAAATTAGAAATGAAAGGCA
TCTTTTTGCGCCCGTTGTATTTCGGCGCCCCGAAAAAATCCGACTGCTGG
AGCCCCTGCCACCACGCTATTGCTGTCGATCAAACAGCAAACAGAGTGAT
TCCCCAATCCATGATATATAAATTAGTACTGTATTGGAGTTCGTGAAAAT
TATCAAAAGACTACATTAAGAGCTCATTTAGGCGAGAAATATTTTTGGCA
AATTTGGTGAGTTTAGACAAGATTCGCCAGAATAAGTTCTCATCAAAGTT
AAATACTTTGGCCCATTCAATTCACCAAAATGAGTTCTTGCCACAATTGA
ATGCTTTTGTATTTTGCAAAAACATCCCCAAATTCATCTAAAATTGCTGA
AAATAAGGCAAAATAGTCCAGATTCAGTCATTTGTTAAAATTAGTTCTCG
CAAAAACCAATAAATCTGACCATATTCACCAAAATAAGTTCTCAAGATTT
ATGCTGCTCACCAAAATTAGTTTTCGTCAAAATTAGCTCCTTAATGTACT
ATCTAATGTGTACTATCCATAAAATAGTATCGGGGTATGTAAAATGAACT
AAGATTTCAGTCGAATCACCCTTTTAAACCTTCGAAACTGAATTTAAGCT
AAGGAGATGTGTTCTAAGGTATATATTTCAAACCGTCGTTTTTGCAATTC
AGAAGGAAGTTTTTTATATACAACAACAAAATAAGTAAGTGTGCGACCCA
AGGCTCCTCTTTTGATAATGATTACCTGGAGGTAGGGAAAGGCGCTACTC
TTTCTCCCTAGATTGCTCCACTTACGATTGATCCTTCTCTTAAATTGCTG
AGCATCAAAGCAGAAAGAATTTCAGTAATTTTTTATACTAAAGCGAAGTC
TTCGGTATAATAGTCTAAGACGAGTTTCATCTAAAAGGAACAAATGTGAA
GACGGGAATTTTTTACGGGAGGGACTGTTGTCTTAAACACAGACTCTATC
CGCCGCGAAACATATTACGTTTTATAATATACAAACTATGTTATATCATA
ATAACATATTGTACGGACGATAGCATGGACTACATAGACGGATGATCTAA
CTCTGCACTACGGTCGCTACCAACAGAAAATGTACAGTCGACTATCGCTA
ATTCGAACACGAATGGGCAATTTTATTTGTGAGAATTACAGAGAGATTCG
AATTATAGAATGCATTTCAAGAGGGGTTCTCCTTGAAGGGGAGTGGAAAC
AACTTCGAAATATAGCAAGACTTGAATAATTTAAGTTCGAATAAGCGAGA
GTTAACTGTAGTACTATTTACATATCTTAAGGCCAGTCTCCACTTGTGCG
CGCTGCGATCGCACTTTTTTAGTAGATCTACCACGCTATTGGTCAAAAGA
AAAATGAAGCAATTCCATTGGCGCGATCTGACGTAACTTTTGAAAAATTT
TGAAATGTGTTCAACTTTTTTTTTTTTGCGCGCGCTACATTTTTAAGCAA
AAAGGATTGAAGCCAAAAAGTGTGATTGCAGCGCCCGCGGGTGGAGACCG
GCTTTTAGATTAATCTAATCCTATTTATTTCAGCTAACGAATGGCCACCT
GTCAGCGAGGAAGAATGTTCGACAGATACCAAACAAAAAGCTATGCATGG
AAAAATGACCTTTGACCCTCCACTTAGTGAGTCCCCAATGACGTCATTTG
AAGTTGACGTCGAATGGAATGATTTGAAGTTTCACCCAACGGAGAATATG
GAGATGAAAGGAGGCATGAACGTGGTGTACACTTTGGGAATGAAAAATGG
CCCTGAAGGACGTTTTGGGATTGAATTATCACACTCTGGAGGTATGATTT
TGAATTCTAACATCATGTTAAAAAGATATGATAGCAACCTGACTGAACGG
CGATTTAGCTTACATGAAATAAAAATAAATAGATATACCTATTTAAGTAC
AAAGGAATTCAAACTCGTTCCCAGTCCGTTAAATCGCTTTTCATGATCAT
GATTGCACAAAGCTCTATCAGTAATAGAATTCAAAAGTGGTACGAGTGCA
CATTTCAAATTCAAGAAAAAGTTTACCATATTATCATCGTCAACACCCCC
TTCTCACAGAAAAAATGGCCAAAATATCGTCCCCGGTTGAAAATTATCCT
CCAATCTTTGTCGCCACTGAGAATAATCAAATAAACCAATCCTCAATTCA
AAATATTATGCCAAATTTTCCCATCCCCAATGAATTTTCTGCCCTGAAAA
CAAAAGAATTGAAATCCCCAGGCATAAAAAATATGGGAATATCGATCCCC
ATAAAGTTTCAGTCCGTCATTTTTATCCCCACTGGCTGAAAAAGTCCTAC
TGGGTCTGTAAGGAGGAAGTGTTCGTCAAAGATCTGAAAAAGTTCTAAAG
GCATTATCAGATGATTTTTGATATTTGACTTAGAGATTCATTTTATGGTC
CTAAGGAAACTGTTTGACCCAATTATTTTCCAAAGCTGAGATATTCGACT
TTGAATTTTCAAATTTTTACTTGAAAACAATAGAAATTCAATGTATAAAG
ACTGTTTAAAGACTCATTTTTAGAGATTTCAAAGTCAAATATCTCAGCTT
TGGAAAAAAATTGGGTCAAAAGATTTAGAGGTGTCTCTCTGGACCATAAA
ATCATTTGATTCAACCGGGGACGATATAGTTGTCAAGTATTCTTTGAAGC
TCTATGGCCAATCCAATCCTTGTAGGGTTTAGATTGTAAACTTTTATTAT
TATTACTATCTCATTTCTTTCCTTATATAAATTCAAAAGTACAATAGAGC
TTTCCTGTTTATAAATCATAAAGAGTACATCTCGTACTAAATAGTAGCAA
CATAAATTACCCTGAGGTGTATTTGATCGAGAAAAAATCGGAGCTTAGGT
TTTTACACATCAGTTTAAAAACGTAAATTGATAATTTGATTTGAAGAAGC
TATGGTTACTTCCCTGATGCTAAAAAGCACACTGTGATTTGAAAAGCGAA
TTGGGAAAAATTCCGCTTAGATCGTTAGATAGATTTCGTTCCTAGATATA
AATAAACTGATATATATATATAATATAAAATAAACTAAAGATATAATAAA
CAGTATATATTAGATAATATTTTCTTATTCAGGACTATAATTTCAGGATT
TTGGGACAAGATTTATGTTCGAAAAGACGCTGTAAAACACTGAAAAGATT
CACAGAATATTCATTGGTGACTCGATAATGATTCTGAACAAGCTTGATTG
CGTCTCATGATTTATGATGTTTGTCTCATTATTATTATTATTATTATTAT
TATTATTATTATCCCTTTGTTGTTTTACCCAGTTAATTTGAATACCATAA
ATTTGTCGTCAAAGAAGAAAACTTAAATCCATAAATAACCGATTATCTTC
TGGAAAGATTTTCGAATACAACTTCAATCATAAGGAACTTTCTAAATTCA
AATTCTCTAAGTGATGAAACACAAATTTATATGGCGAATTTTGATTCTTA
ATATTTTATTATTCAGGCCAGTTCATGTTCTCAATGACTGACGGCAATCG
AAAAACCTCAGACGGCAAGTTACAAAAATCTTCCAAACTTGCATGGCCAA
TAGATACCGAACATTGCAAAAGACATTGCCAGAACTGTGAAAAGAAAGAC
AATGGGTTAACAACAGGGACTTACTGCTCAAGCGAGGAAGATATCATGAT
GGTAGGTTGATTTTTCTTTACAGGAGCTCCAAACATTTTCTTTGGTCTTT
TCACAAGTTGAATTTCCTTAGGAAATATTTGAAATATATTTCATCTATCT
TAAGTAAATTATGCAAGATTTTCTTGAAGTACAGGAAAAGATCATTGTTT
GTATAATTTAGACATACACGTTTTGTTATTTTAAGAAGCTAAACTTACCA
AGCAGCCTCAATGTTTCTTAATAAATCGGCCTTTTGAGTCTAAATGTTTC
TTACATGTATCTAAACTTTTTGACATAATCAGCCAATTTTTCAGGCAAAG
AAAAAAAAAACGTTTTCCTTTTGATTGGAAGGTTCTTAAAAAAACCGAAT
TAAAAAATGTTATTCTCTCATTTACAAAATGCTCGAATAATAGAAACGAA
AACATTTCACGGAGTAATCCCTATGACGGGAACTGAGAATTAGCTCAAAT
CATTGAAAAAATAAGAGAGTTTATGGACATGTTTTTTTTTGACTGTACCA
AAATGCCGATTTTCAACCAACCCGGTTCAAATCGGCACTAACAGAGACAG
CTGAACCCTTTCTTATCGTTATTCAAAAATAAAAAAATAGATTAGTAGCT
CTGTCCGATACTTTTTGTCCGATCTTAATAGCTTTTATGGAACTTTAGAT
ATTGCTTGTTGAATCCGGAGTATTTAAGGATGAAAAAATCATAGTCTATT
TCGGATTTATAAAGTCGGCTCTATATTTGGCCTTTGTCGTGTCCAATTTA
TATACGAAACTTATATCAGGGTGTTTAAAGGATTGGATTTTCACATCGAC
CTCTTTTTTTTGGAAAAAACCGGAGGAAAATGGGATCAAATTGATCATTT
TTGAAATCTAGGTGCTAATTCTAATCGTATATATTTTCCTGACAAGTCCA
TCTATCGGGGAGGTGATTTGAGATTTTTGTTCAGTTGACAAGAAAGGAAC
AAACTAAAGAAAACAGGAATTGTTAAAATGAGTGAAAAATGATTAAAAAA
GTCGTGATGATTGTTTTGATCATAACTCACTCCCACGGCGATCTTTGACT
GGATTAATCGGATTCAAATTTCCTTGTTTTAGCCAAATTTTAAGAAATTA
ACTGAGAAGAAATGGTTTTTTTTCTTTTATCCTTTAGAGGACAAATATAA
GTACATTCTGTGAAAATTTCATGTCTCTAGCACTTTCCTATCCGGAATTA
TCTTGATTCCGATTTAGAGGGATCTCATCCGGGATGAGGACGGGATAGAG
GGATCTCTCGAAAACGAAAGTACCCTATAACTGGTGAACAGTTTGATGTA
TCAAAAAACTTTTGTTCCTACTTTTACATTGCTATAAGGAGACTTTATAT
ACCAAATTTCATCTCCTTATGAGCACTACTTAAGGAGATACAAAGGATAT
TAGCCAAAATAATCCCGATTTTACAAAAGTTCCAATGAAAGATCACTGTG
TCCGGCCTTTAAAAAAATTACTCTTCAGGCTATTTTATGATTTTAGGCTA
CCTCAGGCATGCATAGAAACCTCCTCAGGACCGAATAATGAGTCATGGAG
TGAGATATGATCCAAAACACTCCATGATTAATTAATCCTGAAATACTCCG
AATTTTGAAATTTCAAATAGCTCATTTTAAAGCCCTTCCCAAATCTCAAT
ACATATCAAAATTTTGGGAAAATTCATCATGCGAATGACGAAATAATTAA
AATAAAGTGATTTTCACGATTTTCGAAAACCTGATTTTGGTACAGTCAAA
AAAAAACATGTCCTTATTGAAAGCCTTAATGTAAGACTAAATATGTAAAG
TTTTTATTTTTGAATTTAGGTAGGGGACAGACATACTATTAAATTGGAAC
GCATTTCTGAGAAACAAACAATCAACACCAAAGACTTTGGAGGATTTGAG
AAAGCACATCAAGATCATTTGAATGAAGGAGATCGTGAAATCACTGGT Coding sequence (CDS) from alignment at sc0000524_pilon:70562..76359- >XLOC_038689 ID=XLOC_038689|Name=XLOC_038689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000524_pilon:70562..76359- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTTTACTTCTTGATATTTACTGCAGTTGTTTTAGTTTACGATGA
AGCTTTACTTCTTGATATTTACTGCAGTTGTTTTAGTTTACGCTAACGAA
TGGCCACCTGTCAGCGAGGAAGAATGTTCGACAGATACCAAACAAAAAGC
TATGCATGGAAAAATGACCTTTGACCCTCCACTTAGTGAGTCCCCAATGA
CGTCATTTGAAGTTGACGTCGAATGGAATGATTTGAAGTTTCACCCAACG
GAGAATATGGAGATGAAAGGAGGCATGAACGTGGTGTACACTTTGGGAAT
GAAAAATGGCCCTGAAGGACGTTTTGGGATTGAATTATCACACTCTGGAG
CTAACGAATGGCCACCTGTCAGCGAGGAAGAATGTTCGACAGATACCAAA
CAAAAAGCTATGCATGGAAAAATGACCTTTGACCCTCCACTTAGTGAGTC
CCCAATGACGTCATTTGAAGTTGACGTCGAATGGAATGATTTGAAGTTTC
ACCCAACGGAGAATATGGAGATGAAAGGAGGCATGAACGTGGTGTACACT
TTGGGAATGAAAAATGGCCCTGAAGGACGTTTTGGGATTGAATTATCACA
CTCTGGAGGCCAGTTCATGTTCTCAATGACTGACGGCAATCGAAAAACCT
CAGACGGCAAGTTACAAAAATCTTCCAAACTTGCATGGCCAATAGATACC
GAACATTGCAAAAGACATTGCCAGAACTGTGAAAAGAAAGACAATGGGTT
AACAACAGGGACTTACTGCTCAAGCGAGGAAGATATCATGATGGCCAGTT
CATGTTCTCAATGACTGACGGCAATCGAAAAACCTCAGACGGCAAGTTAC
AAAAATCTTCCAAACTTGCATGGCCAATAGATACCGAACATTGCAAAAGA
CATTGCCAGAACTGTGAAAAGAAAGACAATGGGTTAACAACAGGGACTTA
CTGCTCAAGCGAGGAAGATATCATGATGGTAGGGGACAGACATACTATTA
AATTGGAACGCATTTCTGAGAAACAAACAATCAACACCAAAGACTTTGGA
GGATTTGAGAAAGCACATCAAGATCATTTGAATGAAGGAGATCGTGAAAT
CACTGGTGTAGGGGACAGACATACTATTAAATTGGAACGCATTTCTGAGA
AACAAACAATCAACACCAAAGACTTTGGAGGATTTGAGAAAGCACATCAA
GATCATTTGAATGAAGGAGATCGTGAAATCACTGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000524_pilon | genome | sc0000524_pilon:70562..76359 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 487-615:130 |
| Aaloc | 430-486:2005 |
| Aaloc | 307-429:2131 |
| Aaloc | 49-303:4064 |
| Aaloc | 1-45:5799 |
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