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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000056_pilon:1386119..1393146+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038684 ID=XLOC_038684|Name=XLOC_038684|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7028bp|location=Sequence derived from alignment at sc0000056_pilon:1386119..1393146+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagttcTCATTTGTTTCATGGTTTCTGCTGCTggttattgttgttgt
tgagagCTCATATGGCAAAtcatgtaagaatattttactCTTATTTTCTC
GTTGAttgagaaatttcttttttaaccaaaagttttaaatttgggAGGTC
CAGCTCATACTTGATCCCTAGGGAATATTATATACGGCTAACTTTCAGAT
AATATATGAGATAGGGCAATGCGATATGCGATAAACCTATTATAATCACG
ATATCATGCTGGATTAAAAATTTAGcactttttccaaaatatttcgcGTG
TTTGGGATGAAAAATAAGTATAGTGAAAGCTTTTTGAAACTGAATAATCA
CTATTTTACAATCTTCGAAtcaaaaaaaaggtttgttGGCAGATACTTCA
GCTTTTACTAGTGAACTGAAATTAGAATCGTTCAGAAGGCTTTTGTCGGC
ATATGCTGACATCTGACAAATACAATTTAATGACAAATAATCTGATaaca
gctggtcataattttcttacgagcacggtaaacctctggagatccttgaa
aattaaccatctgaggaaatATAGTCCTCcgtggaaaattctacaacata
ATCTTGTAGTACccggaaagttaaaaactgacTTTTCCTGAAACGGTGCC
CTATTTTTAatacaatcacgcaactttgttgtcattcccagtcctatAAG
GCGAGTGTGGTCCTTACAAATTCGAGATTAGCATATTCgtcaaattgttt
tgttttcacccaTTCCTTTAGAGCTTAAGCGTgatgggcagaaaacaatc
acaaattgatctcaaattaatgaaaatgacaaaaacaaaacaagtatTTA
TGGAGAACTTGTTGGTTGGGACCaggaaaatctttaaaaaaataaatctg
GGGGAGGGGGCCTTTAAAGGTGGAAAAGGGGTTATGAACATGGGTCTTAT
CCAGAATTGCAGGGCTAATAATATCTAAATATTTGGATCAAGAAGTTCGA
CAATTTATGAATATTACGTGACTTGAGGCTTTAGTGTTTgggtaatttca
aaaaaattccagTCCTATATCACACACCCAATGGGAGCCTTTTTCACTCG
GAAGTTCGCCTtgaattttgtccccggtggaaaaaaacaaactgaaattT
CGCTTTAATTGAAAAATACCCCTGTGTTTAGTGACAAATATACATTTTGA
CCATCTCCACTGAATATGTGTAGGGTTGAGGAACCCCATCATGCAATTGA
AACCAGTGACCTACCATCTAGAAGCTACAATCAGTTCTGTAATATTTGGC
ATTAAAAcagtgattttcattttttttgaagtcAAACCCCTCCCCCCAAC
TTCAATGGTTGGATTAGGTTCTTTTGGGGTTATCAACCATTGAAGTTggg
ggaaggggggCTTAGAGAATTAGAAACATAGCTTAGGGGTTATTTTTTAG
GCTTCTACCAAAATATTACAGAGCTGATTGTAGTTTCTTTATTTCACCCT
CTGGCAGACTGGTTAGAATATTTCACAGGgttattgagacaggggtgtaa
aaactTTCAGGTGCTATCTTTCCGATACATGCTAAATGCCATTTCATTGC
AAGATGAAGTTTACAGAACGAAATTGTTTAGTAATTTTCGCTATTCTCAC
ATCATGTCTAAAGATGAAATATAAAATTATGTGTTATCCTGAGTGCTTAc
cgaatttcaatttttatagtGAATTCCCAATTGGATGATTTGGTTGCAAA
TGAAACCAGCACTTTTGAAAGATCATCACTAAAAAACACAACTACACCAC
CATCAGGAAAACAAAGGAATGATTCCAATGCTGAAGAAAATGAGAGCAAT
CATATGAACAACACAGTCCATAGAGAATGTACCCAATCTCACCCTCTGGC
GACAACCACTACTCCCGAAACAACTACTGTCGAAGATACAACAACAGCAC
TAGACACAAGTACATGGCCGGAAACAACTTATGAAACATCAACTGTCCCT
GAAACATCGACTCTTCCTGAAACAACTACAGAGTTTATTGAATccacaac
gaccaccccaaaaacaacgaccacttcgacaacgacaaccacaccaacaa
cgacaacgacaacgaccaccacaccaacaccaacaacgacaacgacaacg
acaacgaccaccaccccagcaacgacaacgaccaccacaccaacaacgac
aacaacaataacgaccaccccaactacaagcacgacaacaaccGAAGATC
CAAGAACAGTTGTCATAGGTAAGGTTTCGTTATTTTTGCTGtaactttgg
aaaaaaatcaaaagtaaggccaaattacaagtaagtaaaattttaggcca
aaaagtaaaaaaaaaaaaatcaaaaaaattcactctaagctatccaacaa
GCTATGAAGTAGCTTCTAACTCCTTTtacaatctttcaagaaatagagaa
ttccggttattttgacgttttttgagatttaaagttcgggcgaaaaagcc
gattttgggctttctctttaatttactttaaaggcagaaagtttcgcggg
cagaaagttttgcgagaccgaaaagtcgcgaaatttcgcgaatttaagtt
tcgcgatttttactttttgaagaaaatttacggaagaaactttcgcggtt
ttttgtgaatgttcaattttaatAGCGATAACCTAGGGAATGAATGGCTA
GGGAAAGTGGataaagaattatttcaaatctcatttttgtcttcaatcga
aagagtgatatgctaataaatgaaaaataaactatttacACTTCTTCCTC
CAATTCTGAATTCTCGTCACTGCTATCTTCGGCGGTAATATCGACTCTCG
TTCCGCATAATAATTCAAATTCCTCCGGAGATATATCTGCGATTGGCAGT
AAATACTGGTTACCtatgtttttttcgatttttcgccttttaaaacttgg
aaaaaactttcgcgatttttaggaaaatttcatttttcgcgaaattaact
ttcgcaaatttcttgtttaatttcttacctggcagaaactttcgcgaaaa
aatgccaaaagcgCGAaattttctgcccgcgaaagtttctgcccttaaag
taatcGAATATTTTAATTTGAGACGGGTAGGCAGACTTCCGGGCTATATT
CGGAgccttactggaccatttttgaacttttggatcctcagatcctaagg
ttaaagttaaaactcagagttatctcaggcaaattaaggcacgtccaaat
ttatcttaattttttatcaccgtttccacttgtcatagcatatcacctca
tacatcgaaagaagcgtattggagtatagatcactggaatagctgtgcca
taattaattttttcacccaaaaaaagatattagacaaaaaccaaaaaatg
ctgacgtcagcaaaacttgttttttgaataactccagtttggcttttggt
ataaacatgaaatttggacaaaagttgcatatcaataataggaacatttt
tgcataatttttttttgcaaattttgctgacgtcagcagaaatcagcaaa
atacgaaagtttgcaataaagtgctgacgtcagcaaaatttcaaaaaaac
ttttttttaaaatgatccttttaatggtgtgcaactttggtccaaatttc
atgtttttaccttaagccaaactggagttattcaaaaaacaagttttgct
gacgtcagcattttttggtttttgccttatatctttttttgggttaaaaa
attaattatggcacagcaattccagtgatctacactccaatacgcttctt
tcgatgtatgaagtgatatgctatgacaagtggaaacggtgataaaaaat
taacgtaaatttaaaaaatctggacaggccttaatttgcctgagttaaaa
ctctacccttcgaacctactttagagcacttacaaatcgattgtggtttt
aaaacttcctggggaatttcctaTTTGtatcaaatatttcttgaaggatt
gtagATCGGGAGataaaggccttaaaaatttgaactagcgattttcttaa
aaaactcagaaaaaaaggaccgtggcacttaaagggatAACCTTCTTCGC
ATTACATAGCGTTACATAATAGTTAGTACAAAAACCCTGAACCTGATACT
TACTGTTTTATCTTGATATCAACTCCCTAAGCTCTTAAGCATCAAAAACT
AAAATCTcaatttgctcagtttttttatcatcacGTTTATTGTAAATTTA
CGCCTCTTAGGATCTGGTTTAGGATTCAATTACGTGATCAAAAGTGAGCA
AAATGAAGTGATTTCTCAACGAAAATTAAGCAgtaagaaacaaaaggctt
ccgcAGATCagggtttctaaacgtttttacGGTTACACTCTATCCGTCAT
GTTTTATGTACTCTATTATCATTTTTAGATTGTGATTTTTCATCAGTGTG
TAAGAATCCCAATGACGAACATGTCGTTTTCAGAAAGAAAGATTATAAGT
CAAATGGTAAGAAATTTCCAATGTAAAAAGACGCTTAAAATTAAAATGAG
TAAATATTGCAATCTCTGTAGTGTAAGGTCGTGGCTTTTTCATAAAGTCG
AAAAACATATCCgaacttatttcgtactttccagtctctggTTCGTAGTT
TATCTGACTTCCTGGTActatgtgaattattttttatgttttctaaCTGA
CTGATTGACTTACCGAAAGATcGCCACCGGTGGGATTCGAATTCACCAAA
TGCAAAGTTCCATCAATTGGTAACCCAATGCCTTATCCACTGCGCCACGG
ATTCATGCCAGGAGAGTGTTTCTGACGGCTATTGATATTGTACAAACTAC
AGACCAGACTATATTAAGAGAAAATCCCAAAAGAGTGCTTTTTTCGAGCT
CCAACCCTAACCCTAACTGATAATAACCCAATTCCTAGCCAATCTGATAC
GTAACCACACCCAAACCACACCTATACCCGACCCTAATAGGTCACCCGCA
GGTCCTGACACTATTCCtggatgccggatccgaaaaatagatgtATGTCT
TTCgcctttatgaagaagccttcaccgtaGTATAACTTCTTTTCGAAGGA
AGGGGCGAGCGAAATATCTGCTGGTGTTGCTCTTATACGCATCTTTTCGG
TCAGGCTATTCAAGTTAAAAGTTTTGTGACTTTGGCCTTTTAGCAAGAAA
AGCTAAAATGTTGGCTTAAAGGGACATATATAACAGTActtgcaaaattt
gtaaacaaactgtatgcagcggatacaaaatcaaaacaaatgtcacatgt
caaaataaaaaatcaaaccaaatatgGCTAATTTTGATTCTTCAATTGTT
TTACAAGTTTGTTTTGGACACATGATTTTAATTGTTCTCTTTAATGACAC
GTGGTTCTCACAATGTTTACATTTTATTACTTTTATGTCCCTTTAAAGGT
TTTATTTTTACACAAGTGTTCCCGTTTTATATCAGTTTTCCTCTTTCTGA
CCAATCTTGCTCCACATCCGTGTCAATCCAATCTGAAAAAGCTTGTGAAT
GAAAATGATGAGTGAGCAAACGATACCACTCTTATTTAAAAACAAAACCT
TTAAGAGCCGTAATCTTGACTTGAAAAAAGTTTGTCTAAACTCTTaagtt
caattttttagaTAATCACTTCCAAATGTCGTGTTCTAAATATTCGCTTC
GAACATTTCAGGTTGGTTACTACATAATCCTTATACAGCCCGAGCATACA
TCTACGTCCGATTCTATCCAAATCATATCGACAATTCTGCACAATGTGAG
CTCCGTCAGAAAACACGTATGACCGTATCCTTTATTTACCGGCCTGGAGT
TGCCAGGCAGAGTGCGAGCTTTAACAGGCTCTATTTGTATGTCTATTCCT
ACAAGTTGGAACGAGTTGGATGGCGTTATAAATATATAAAGATCGACTCG
TATCATACGCTTCCATTTGGTCCGCAAACAAATGCAATTGCACACTCTTG
GAATCGATTTTCGGTTGATTTCAACATCAAATGTGGCAGATATATGTTTG
TAAGTAATTTTGACAGATTGTCGATAAGGTTAGTATTATGAAGTAGATTT
TAAACATGGTTTTTAACCAccccaaattttaagtttttgaggCAATTATT
TCTTGTGTGAATATTACTTATAAGAAATCGGGTGTCTAAGATTCTAAAAA
GTCTTACACTTAccttggccatcgaagctttatgttcttatatagtttgt
tcttaagaTCGTGTCTGCTATAttttttttAGGACCACTCAACTCGACTC
AACTCActttatttaattgtttttttttcttattgcgGTTTGGGTGTTGG
TATTTCACCGTCAGATGTCATCATATAAAGAAGTTTTATAAAAGCAAACT
ATAGGAACACAAGGTTTTTTGGCCAAGATATTAAGTAAcggtttaagaac
attttaaactttATTGACAGTAAAAGACCCAATTTCTTTGACAAgaacac
tcacaaaatggtgaaagtaacaggcttgaaactcaaaaggttaagaacgt
ATGAATGattcaaaaatttagaatgtTCTTATGTGTATATGATTGTTGCT
TGACTATCCAAATGCTATCTATAAGCTGGGGGTAACCTTGCTGACTGACG
GGGGTTGTGccgctgaagttcgaaaaatggaccctacttgggacttattt
ttttaaagtgaccctgaatgggactaaaattacaaaattttatcaaatat
ctCCATACTTTTTccaaattccttcaaaaatgtACCCTAGGAATgactga
tttttcaattttggtgattttgcaGCCCTTCCTGGGACTTGTGGGagtaa
aaaggtaccctgaccagaaACACATATCTGTGTCCGTTTTTGCCAAAGTA
CCCTCTAACCCTTTTAGATTTATAtgcctaaatttttttaaatttttttt
tctttctaggtTTATATCAGTACAGCAAGCTATCAAAACTATCCAATAGA
ATTGGATAACCTGAAGATATTGATGTAG Coding sequence (CDS) from alignment at sc0000056_pilon:1386119..1393146+ >XLOC_038684 ID=XLOC_038684|Name=XLOC_038684|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000056_pilon:1386119..1393146+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagttcTCATTTGTTTCATGGTTTCTGCTGCTggttattgttgttgt
tgagagCTCATATGGCAAAtcatatgaagttcTCATTTGTTTCATGGTTT
CTGCTGCTggttattgttgttgttgagagCTCATATGGCAAAtcattGAA
TTCCCAATTGGATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAAGAT
CATCACTAAAAAACACAACTACACCACCATCAGGAAAACAAAGGAATGAT
TCCAATGCTGAAGAAAATGAGAGCAATCATATGAACAACACAGTCCATAG
AGAATGTACCCAATCTCACCCTCTGGCGACAACCACTACTCCCGAAACAA
CTACTGTCGAAGATACAACAACAGCACTAGACACAAGTACATGGCCGGAA
ACAACTTATGAAACATCAACTGTCCCTGAAACATCGACTCTTCCTGAAAC
AACTACAGAGTTTATTGAATccacaacgaccaccccaaaaacaacgacca
cttcgacaacgacaaccacaccaacaacgacaacgacaacgaccaccaca
ccaacaccaacaacgacaacgacaacgacaacgaccaccaccccagcaac
gacaacgaccaccacaccaacaacgacaacaacaataacgaccaccccaa
ctacaagcacgacaacaaccGAAGATCCAAGAACAGTTGTCATAGtGAAT
TCCCAATTGGATGATTTGGTTGCAAATGAAACCAGCACTTTTGAAAGATC
ATCACTAAAAAACACAACTACACCACCATCAGGAAAACAAAGGAATGATT
CCAATGCTGAAGAAAATGAGAGCAATCATATGAACAACACAGTCCATAGA
GAATGTACCCAATCTCACCCTCTGGCGACAACCACTACTCCCGAAACAAC
TACTGTCGAAGATACAACAACAGCACTAGACACAAGTACATGGCCGGAAA
CAACTTATGAAACATCAACTGTCCCTGAAACATCGACTCTTCCTGAAACA
ACTACAGAGTTTATTGAATccacaacgaccaccccaaaaacaacgaccac
ttcgacaacgacaaccacaccaacaacgacaacgacaacgaccaccacac
caacaccaacaacgacaacgacaacgacaacgaccaccaccccagcaacg
acaacgaccaccacaccaacaacgacaacaacaataacgaccaccccaac
tacaagcacgacaacaaccGAAGATCCAAGAACAGTTGTCATAGATTGTG
ATTTTTCATCAGTGTGTAAGAATCCCAATGACGAACATGTCGTTTTCAGA
AAGAAAGATTATAAGTCAAATGATTGTGATTTTTCATCAGTGTGTAAGAA
TCCCAATGACGAACATGTCGTTTTCAGAAAGAAAGATTATAAGTCAAATG
GTTGGTTACTACATAATCCTTATACAGCCCGAGCATACATCTACGTCCGA
TTCTATCCAAATCATATCGACAATTCTGCACAATGTGAGCTCCGTCAGAA
AACACGTATGACCGTATCCTTTATTTACCGGCCTGGAGTTGCCAGGCAGA
GTGCGAGCTTTAACAGGCTCTATTTGTATGTCTATTCCTACAAGTTGGAA
CGAGTTGGATGGCGTTATAAATATATAAAGATCGACTCGTATCATACGCT
TCCATTTGGTCCGCAAACAAATGCAATTGCACACTCTTGGAATCGATTTT
CGGTTGATTTCAACATCAAATGTGGCAGATATATGTTTGTTGGTTACTAC
ATAATCCTTATACAGCCCGAGCATACATCTACGTCCGATTCTATCCAAAT
CATATCGACAATTCTGCACAATGTGAGCTCCGTCAGAAAACACGTATGAC
CGTATCCTTTATTTACCGGCCTGGAGTTGCCAGGCAGAGTGCGAGCTTTA
ACAGGCTCTATTTGTATGTCTATTCCTACAAGTTGGAACGAGTTGGATGG
CGTTATAAATATATAAAGATCGACTCGTATCATACGCTTCCATTTGGTCC
GCAAACAAATGCAATTGCACACTCTTGGAATCGATTTTCGGTTGATTTCA
ACATCAAATGTGGCAGATATATGTTTgtTTATATCAGTACAGCAAGCTAT
CAAAACTATCCAATAGAATTGGATAACCTGAAGATATTGATGTAGgtTTA
TATCAGTACAGCAAGCTATCAAAACTATCCAATAGAATTGGATAACCTGA
AGATATTGATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000056_pilon | genome | sc0000056_pilon:1386119..1393146 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1039-1107:6960 |
| Aaloc | 703-1038:5714 |
| Aaloc | 625-699:4431 |
| Aaloc | 76-621:1722 |
| Aaloc | 1-72:1 |
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