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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000056_pilon:1400024..1403785+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038683 ID=XLOC_038683|Name=XLOC_038683|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3762bp|location=Sequence derived from alignment at sc0000056_pilon:1400024..1403785+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCAAAACTGGTCAGAACCATTTCATTGCTGGTCATTTCAATCTT
TTGCGTGATTACTTCAATATCGGCACTGGCTATAAACGAAAGCGTTGGGC
AAACAGTTAAAGACAGTTCAATTCGAACTAGAATTCCAACTGAGATACTG
ATAACAACTTCAATGATGTCAAGCAGTAGCCAGACAATATCAGATTTACC
ATATTCGGCTGATTCCAATACCATGGAGGATTCTTTGACGTCTTCATCCC
TATTCACATTATTCACAACCTCTCAATATCACCAAACAGTTTCACTTGAC
TCCTCGACGACCTCGACAGATCCATCACCAACAACTAACACATGGTCAAT
TCAACCATCAGTATACGAAATGCAAGTCCAACCATCGTCCAATATTAAAA
CCAAAGGACTACATGAACAAACTGTGCATCCAGGTTACCATGATGCGATA
GGCCTTACAACAAAATCAATCGCTACAGAAGGCATTTTGTCTGCGTCTAT
AACCAGCCAGTTTAGTACTTTGACCAGAACTACAACAGAGCATTCTAGAG
CTACAGGAGATTCTATTAGAAATATGTCAATGTCACTCAGAACTACAACA
ATGACGTCTCTTAGAACTAAAATAGATTCTGGTGAATCTTCAACAGTTTC
TTCTGGAGTTACAACAGATTCTCTTGGAACTAAAACAGAGTATTTTGAAA
CTGCAACATTTTCTCCTGGTACTACATCAAAACCACCCTGGACCTCAACA
GATTCTCCTAAAACGGCAACAAATTCTCCTGGAGGTACAACAGAGTTTTC
AGAAACTACAACGTCGTCTTTTGGATCTAAAACTGAGTATCCTGAAACTG
CAACATTTTCTTATGGAACTACAACAGAGTCTTCTAGGACTGTAACAGAG
TCTCTCAGAACTACAACAGAGTCTCCTAGAACTACAACAGAGTCTCCTAG
AACTACAACAGAGTCTCCTAGAACTACAACAGAGTCTCCTGGAACTACAA
CAGAGTCTCCTGGAGCTGCAACAGAGCCTCCTGAAACTACAGCAGAGCCT
CCTGGAACTTCAGCAGAGCCTCCTGGAACTACAACAAAGTCTCTTGGAGC
TGCAACAGAGAATCCTGGAACTACAACAGAATTTCCAAAAACTACAACGG
ATTCTATTAAAACCACAAAAGAGCTTCTTGGAACTAAGAAAAATGCTCCT
GAAACTAAAACATATAGCCTCGGAACTACAGCACAATCCGGAAGTAGTGT
CAAGACAACAGAGTCTACTGGAACTAGTGCAATGGAAATTGAAACATCCA
CTACAACAAACCTTCCCACTACATCTTCAGCCTCATCTACAATTGAAATT
GATAATACAACAAGACCAAAGGcaactgaaaattcaaaattccaaTCACA
TTCATCAACAAAATCTGTAGTGGTTTCTACCACtaaacaaataatatctt
ataacaacagtaataaccaaaacaaaacagtgacaacaacaccaacaact
aaacTTAATCCCGAACCGGAGAATAAACTTCCGACCACACCTATGgatgc
ttatgatttttttcttcttcaagtaAAACTTTTCAGAAATGAATCACAGA
ACTGTACAGTGTTTGTGAGTAATTTTACGGGCAATCAAACCTTCTTCAAT
GCCACGTGGTCAATGTGTTATGAACCTCCATCAGGTAAGATTTACGTAAA
TAGCAAccaccccttctcacaaacccggtgggattttatccacagattta
taaagcccgaagggctagatgtcgtgctttaagctgttccaagtaaaaaa
taattgaatatcgcaaaaaaaaaattgctgctTTTGCTTTCGAAAACCCG
TGGAGCTTCTTATGGGTCAAGCGCTGAAGTTCTATTGTAATCTCACGTGA
CTTAGGTTGAATTTCCTACTTAATCTTGGCACACTTTCAAACCAAAGCAC
GTCATCTAGCGCCTCggactttataaatctatggttttaTCACCCCGCAG
TTTGGGTAAAAATAATAACGGACAAAAACTTGATGGGAATTGGTATTCCA
ATGTTTTTTAATGGCTTGGGATTTGAATtcaattgttttctagccagaaa
attcagaatAGCCGAAAagaatagcacaatattttgcagtgaggatttgc
ttatctgattattttcagcggggactaaaattggtgtataattttccatc
ggagacgatattttggccaatttttccagtaggaaAAGTTCCCAGGGAGT
ccgtgagaagggagtgtataATAACGACTAAAACTTATGCTGAAGGCAAA
TGATAAGTAATCAGTGTAACCATACCGTGAAAACCACAGGTCGAAATcgt
atatcgacgctgtgccgaccaattcagattctattcagcgcgcaatcaac
ggagagaaaagtaaccatgacgaccatccaagatcttggatgaagttcaa
agttgatatttttattcccgtcgttggaAACACAGCTCAAAAATGTCAtc
gatgctttttaaaaagagtcattGATAGAGAATCAGGGTAGTGTAACCAG
TGATCAGTTGATATAAAGATAAACTCCGTGTGGTGTCATCTTCACCCACG
ATcagccatttttctaagaaatggcaGAAAGAATATGTACAGGATGTCTT
ACTAACACCTTGCTTAGGTTCCTGTGTTTGACCTGCGCATAGTTTTctgt
ttgttgttttattttgtggGTGAAAATTAGTGAGTTAGAAACAGGTAGAT
TGCTTGAGATTTGGTTGAAGATAGTGCCTAATTCAGCTAAATCAGTTTAC
TGTTCACTGAGAAAATACACAGCTCTAGTTTTCGGATGATTGCCAGACTG
ATTGAGTTCATTCTTTCAATCCATTCTTGTTGGTCTTACACAATAAACTC
AAGGTCTTGAAATATACACTACCAAGTATCTAAAgttgtttattttgatt
aattttacgACCAATATCTCTTCATTCTCTGTTGTTTTTTATAGAACCTG
AGCCACCGCAATGGTACGAAGATCCACAGATCTACTATTATGGTGGCGGT
GGCATTATCTTCCTTATATTTCTCTTCGCTATGAAAAGTCTATGCGCATA
TTGCAGGTGAGTTTTAAGCCGTTTTTAATGGTCTTTGCAAACTCGTTCTA
GCAATGTGTTTGCTTTGTTTGACCTCAGGGAGGGGTATGTGCTAATCAGT
CTCTATTGTACCGACAGGGACGCAAAAACCATAAAACAGCTTTTGGGTTT
GTAGATTCTCGTTATTTTGGTCAAAGTTCGAAAAACGTTCCTGGAATTTG
TGAAGATAGGCTCTCGAAGAGTCGTAAAAACATTAATTTAGTCTCTGGTC
TCAGTTTCTTTAAACTTTGGCTCGGATATACCGGTCACCTCATTGAAGCA
ACCTTGATTCCTGAATATTGTAAAATTCCATAATGATGATATTCTTATCA
AAGTCTTATTTTGTTGGTCGATTTAATCacaaatgttttttatattaaca
agatatttttataaaaagaaaataagtttcCACATTTGATAGTACGATAG
AAACTATTTTACGTACTCTTTACCGATCAAATTTACTTTTATCTTTCAGT
AAGTACAGCAGTGATTACTTGTTGCCACGCTGGAAGCTCCAGAGACGCAA
GAGAGGACAGAAAGTTCGTGAATTTTGGTGTTTACAACATATTGTGTCTG
TCGAAGAACTTCATaaaaaaccaaaaacctttaaagtgCGAGTTGATAGG
ACAATTCCGTAA Coding sequence (CDS) from alignment at sc0000056_pilon:1400024..1403785+ >XLOC_038683 ID=XLOC_038683|Name=XLOC_038683|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3918bp|location=Sequence derived from alignment at sc0000056_pilon:1400024..1403785+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCAAAACTGGTCAGAACCATTTCATTGCTGGTCATTTCAATCTT
TTGCGTGATTACTTCAATATCGGCACTGGCTATAAACGAAAGCGTTGGGC
AAACAGTTAAAGACAGTTCAATTCGAACTAGAATTCCAACTGAGATACTG
ATAACAACTTCAATGATGTCAAGCAGTAGCCAGACAATATCAGATTTACC
ATATTCGGCTGATTCCAATACCATGGAGGATTCTTTGACGTCTTCATCCC
TATTCACATTATTCACAACCTCTCAATATCACCAAACAGTTTCACTTGAC
TCCTCGACGACCTCGACAGATCCATCACCAACAACTAACACATGGTCAAT
TCAACCATCAGTATACGAAATGCAAGTCCAACCATCGTCCAATATTAAAA
CCAAAGGACTACATGAACAAACTGTGCATCCAGGTTACCATGATGCGATA
GGCCTTACAACAAAATCAATCGCTACAGAAGGCATTTTGTCTGCGTCTAT
AACCAGCCAGTTTAGTACTTTGACCAGAACTACAACAGAGCATTCTAGAG
CTACAGGAGATTCTATTAGAAATATGTCAATGTCACTCAGAACTACAACA
ATGACGTCTCTTAGAACTAAAATAGATTCTGGTGAATCTTCAACAGTTTC
TTCTGGAGTTACAACAGATTCTCTTGGAACTAAAACAGAGTATTTTGAAA
CTGCAACATTTTCTCCTGGTACTACATCAAAACCACCCTGGACCTCAACA
GATTCTCCTAAAACGGCAACAAATTCTCCTGGAGGTACAACAGAGTTTTC
AGAAACTACAACGTCGTCTTTTGGATCTAAAACTGAGTATCCTGAAACTG
CAACATTTTCTTATGGAACTACAACAGAGTCTTCTAGGACTGTAACAGAG
TCTCTCAGAACTACAACAGAGTCTCCTAGAACTACAACAGAGTCTCCTAG
AACTACAACAGAGTCTCCTAGAACTACAACAGAGTCTCCTGGAACTACAA
CAGAGTCTCCTGGAGCTGCAACAGAGCCTCCTGAAACTACAGCAGAGCCT
CCTGGAACTTCAGCAGAGCCTCCTGGAACTACAACAAAGTCTCTTGGAGC
TGCAACAGAGAATCCTGGAACTACAACAGAATTTCCAAAAACTACAACGG
ATTCTATTAAAACCACAAAAGAGCTTCTTGGAACTAAGAAAAATGCTCCT
GAAACTAAAACATATAGCCTCGGAACTACAGCACAATCCGGAAGTAGTGT
CAAGACAACAGAGTCTACTGGAACTAGTGCAATGGAAATTGAAACATCCA
CTACAACAAACCTTCCCACTACATCTTCAGCCTCATCTACAATTGAAATT
GATAATACAACAAGACCAAAGGcaactgaaaattcaaaattccaaTCACA
TTCATCAACAAAATCTGTAGTGGTTTCTACCACtaaacaaataatatctt
ataacaacagtaataaccaaaacaaaacagtgacaacaacaccaacaact
aaacTTAATCCCGAACCGGAGAATAAACTTCCGACCACACCTATGgatgc
ttatgatttttttcttcttcaagtaAAACTTTTCAGAAATGAATCACAGA
ACTGTACAGTGTTTGTGAGTAATTTTACGGGCAATCAAACCTTCTTCAAT
GCCACGTGGTCAATGTGTTATGAACCTCCATCAGATGGAATCAAAACTGG
TCAGAACCATTTCATTGCTGGTCATTTCAATCTTTTGCGTGATTACTTCA
ATATCGGCACTGGCTATAAACGAAAGCGTTGGGCAAACAGTTAAAGACAG
TTCAATTCGAACTAGAATTCCAACTGAGATACTGATAACAACTTCAATGA
TGTCAAGCAGTAGCCAGACAATATCAGATTTACCATATTCGGCTGATTCC
AATACCATGGAGGATTCTTTGACGTCTTCATCCCTATTCACATTATTCAC
AACCTCTCAATATCACCAAACAGTTTCACTTGACTCCTCGACGACCTCGA
CAGATCCATCACCAACAACTAACACATGGTCAATTCAACCATCAGTATAC
GAAATGCAAGTCCAACCATCGTCCAATATTAAAACCAAAGGACTACATGA
ACAAACTGTGCATCCAGGTTACCATGATGCGATAGGCCTTACAACAAAAT
CAATCGCTACAGAAGGCATTTTGTCTGCGTCTATAACCAGCCAGTTTAGT
ACTTTGACCAGAACTACAACAGAGCATTCTAGAGCTACAGGAGATTCTAT
TAGAAATATGTCAATGTCACTCAGAACTACAACAATGACGTCTCTTAGAA
CTAAAATAGATTCTGGTGAATCTTCAACAGTTTCTTCTGGAGTTACAACA
GATTCTCTTGGAACTAAAACAGAGTATTTTGAAACTGCAACATTTTCTCC
TGGTACTACATCAAAACCACCCTGGACCTCAACAGATTCTCCTAAAACGG
CAACAAATTCTCCTGGAGGTACAACAGAGTTTTCAGAAACTACAACGTCG
TCTTTTGGATCTAAAACTGAGTATCCTGAAACTGCAACATTTTCTTATGG
AACTACAACAGAGTCTTCTAGGACTGTAACAGAGTCTCTCAGAACTACAA
CAGAGTCTCCTAGAACTACAACAGAGTCTCCTAGAACTACAACAGAGTCT
CCTAGAACTACAACAGAGTCTCCTGGAACTACAACAGAGTCTCCTGGAGC
TGCAACAGAGCCTCCTGAAACTACAGCAGAGCCTCCTGGAACTTCAGCAG
AGCCTCCTGGAACTACAACAAAGTCTCTTGGAGCTGCAACAGAGAATCCT
GGAACTACAACAGAATTTCCAAAAACTACAACGGATTCTATTAAAACCAC
AAAAGAGCTTCTTGGAACTAAGAAAAATGCTCCTGAAACTAAAACATATA
GCCTCGGAACTACAGCACAATCCGGAAGTAGTGTCAAGACAACAGAGTCT
ACTGGAACTAGTGCAATGGAAATTGAAACATCCACTACAACAAACCTTCC
CACTACATCTTCAGCCTCATCTACAATTGAAATTGATAATACAACAAGAC
CAAAGGcaactgaaaattcaaaattccaaTCACATTCATCAACAAAATCT
GTAGTGGTTTCTACCACtaaacaaataatatcttataacaacagtaataa
ccaaaacaaaacagtgacaacaacaccaacaactaaacTTAATCCCGAAC
CGGAGAATAAACTTCCGACCACACCTATGgatgcttatgatttttttctt
cttcaagtaAAACTTTTCAGAAATGAATCACAGAACTGTACAGTGTTTGT
GAGTAATTTTACGGGCAATCAAACCTTCTTCAATGCCACGTGGTCAATGT
GTTATGAACCTCCATCAGAACCTGAGCCACCGCAATGGTACGAAGATCCA
CAGATCTACTATTATGGTGGCGGTGGCATTATCTTCCTTATATTTCTCTT
CGCTATGAAAAGTCTATGCGCATATTGCAGAACCTGAGCCACCGCAATGG
TACGAAGATCCACAGATCTACTATTATGGTGGCGGTGGCATTATCTTCCT
TATATTTCTCTTCGCTATGAAAAGTCTATGCGCATATTGCAGTAAGTACA
GCAGTGATTACTTGTTGCCACGCTGGAAGCTCCAGAGACGCAAGAGAGGA
CAGAAAGTTCGTGAATTTTGGTGTTTACAACATATTGTGTCTGTCGAAGA
ACTTCATaaaaaaccaaaaacctttaaagtgCGAGTTGATAGGACAATTC
CGTAATAAGTACAGCAGTGATTACTTGTTGCCACGCTGGAAGCTCCAGAG
ACGCAAGAGAGGACAGAAAGTTCGTGAATTTTGGTGTTTACAACATATTG
TGTCTGTCGAAGAACTTCATaaaaaaccaaaaacctttaaagtgCGAGTT
GATAGGACAATTCCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000056_pilon | genome | sc0000056_pilon:1400024..1403785 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1777-1938:3601 |
| Aaloc | 1666-1773:2997 |
| Aaloc | 1330-1662:1351 |
| Aaloc | 1249-1329:1264 |
| Aaloc | 1219-1248:1222 |
| Aaloc | 1-1218:1 |
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