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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:412037..413655+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038645 ID=XLOC_038645|Name=XLOC_038645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1619bp|location=Sequence derived from alignment at sc0000115_pilon:412037..413655+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGCTAACAAAACACATCTGATAACAGCACCAAGCCCATGTAACGG
GACTACCGATCCATATGGAGCACAATGTGTGGACAATAAAGGTCATGACT
TGAAAGAACATTGGTTCAGATGTTTTGATCATTCACCAGAAAACATCATC
AGAAATTCAATAATTGGGACAGTCCTTTTGGCAATATCAGCCCTGGGTAC
GCTCAGTAACCTTTTTATATGCTTGGTggttttcaaattcaagatttACA
AGAATACGCAAGAAATGTTGATTCTACTGCTTGccatttctgattttttt
atctCGCTGTTTTTGATTTCAACAGAGAGTGTCTTGTTTCTTTGCATGAA
TCCGATCTTTCAAGCCACAATCCCGATTTGTAGACCATATGATATATTTT
ACATATTCGTTACAATGTGGTAagtaaattttaagatttcaacTTCGGAA
TTTCTGACTCCAGGTTACTGAGTAATaagtcccaatggggataggaAATC
TTTAGGTgcggaaattctattgtttcaaagCTCAATAACCTAGAAAAGAT
TCtatatattttagatttttctcaGTTCATCTTAGATTTCcaatgaaaat
aaagttttaaggtatttttctcaTCTGGGACAATTCATTGGTCAATTTTT
GCAATGGGAAGGTCGTCCAACCCGGCCTTTTGACACAAGTGATCTTAGAA
TATTGAAATACGTCAACTATGACATTGCACGCCTTAGCTTTGAGCTTTTT
ATACGTaacattttttatcatatcacccttacagtgcactttgggaggCT
TGGGGAAAAGATCCCTAAGGACCGCATTGGAAAAGTCATTTAGTTTGAGT
GCGTCCCCCCGGATGAGGATATTTGTGCAAGATTTGTACCGTCATAGTAA
CTATTAAAATCCACTTTCTTTTTCGTATTTCTAGGGACACCATATTACCG
ATATCATGTTTTGTTGTTATGTTCATGAGCATCGAACGCTTCTTAGCGAT
ACGTTACCCGTTCAAGATCCGGCAAATCAAGCGACGCTATATTGTATTGG
GATACGTTATGGCATGGGTTTACACTTTTGGTGCGTCCGTAGTCGGATAT
CTAACTCACTATCCTGGTTGGATCCGAACAATGGTGTTGAATATCAGTAA
TATTTTACCACTATTGATAAATTCTATGGTTTATGTATACATCCAACGTC
TTGTATACAAGCACTCTAAAGCTATAAACAGACAACGGGTAAGTGTCGTA
AAGCAGTCAACCGTTGTATGTCATGAAAACCGACAGAGTAGAGGAACCTA
TAAGAAAAACGTTTTGTTTCTATACGTAGCTGTATCTTTTTTCGTCTTTT
GGTTACCGTTTATTTGCTATGAGATAGCTTTCATTATGAATCCAACGCGT
TTCGATTCTTGTACATACATTACTCAAATCATTCTATCTTGTTTGGTGTA
TCTAAACAGTATAGGGAATGTGTTCATTTATGGAGCTTCAAGTAAACCTT
ATAGAAAAGCTTATTGGAGATTCATGGAGAATTTTTGTTGTAAGATTTGC
AGCGAGAAGTCTTCCACTGTAAACCCAATTGAAGGTGTTTCGTTATCTCA
AAATAACTTGAGAATTTAa Coding sequence (CDS) from alignment at sc0000115_pilon:412037..413655+ >XLOC_038645 ID=XLOC_038645|Name=XLOC_038645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2208bp|location=Sequence derived from alignment at sc0000115_pilon:412037..413655+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGCTAACAAAACACATCTGATAACAGCACCAAGCCCATGTAACGG
GACTACCGATCCATATGGAGCACAATGTGTGGACAATAAAGGTCATGACT
TGAAAGAACATTGGTTCAGATGTTTTGATCATTCACCAGAAAACATCATC
AGAAATTCAATAATTGGGACAGTCCTTTTGGCAATATCAGCCCTGGGTAC
GCTCAGTAACCTTTTTATATGCTTGGTggttttcaaattcaagatttACA
AGAATACGCAAGAAATGTTGATTCTACTGCTTGccatttctgattttttt
atctCGCTGTTTTTGATTTCAACAGAGAGTGTCTTGTTTCTTTGCATGAA
TCCGATCTTTCAAGCCACAATCCCGATTTGTAGACCATATGATATATTTT
ACATATTCGTTACAATGTGATGCTTGCTAACAAAACACATCTGATAACAG
CACCAAGCCCATGTAACGGGACTACCGATCCATATGGAGCACAATGTGTG
GACAATAAAGGTCATGACTTGAAAGAACATTGGTTCAGATGTTTTGATCA
TTCACCAGAAAACATCATCAGAAATTCAATAATTGGGACAGTCCTTTTGG
CAATATCAGCCCTGGGTACGCTCAGTAACCTTTTTATATGCTTGGTggtt
ttcaaattcaagatttACAAGAATACGCAAGAAATGTTGATTCTACTGCT
TGccatttctgatttttttatctCGCTGTTTTTGATTTCAACAGAGAGTG
TCTTGTTTCTTTGCATGAATCCGATCTTTCAAGCCACAATCCCGATTTGT
AGACCATATGATATATTTTACATATTCGTTACAATGTGGGACACCATATT
ACCGATATCATGTTTTGTTGTTATGTTCATGAGCATCGAACGCTTCTTAG
CGATACGTTACCCGTTCAAGATCCGGCAAATCAAGCGACGCTATATTGTA
TTGGGATACGTTATGGCATGGGTTTACACTTTTGGTGCGTCCGTAGTCGG
ATATCTAACTCACTATCCTGGTTGGATCCGAACAATGGTGTTGAATATCA
GTAATATTTTACCACTATTGATAAATTCTATGGTTTATGTATACATCCAA
CGTCTTGTATACAAGCACTCTAAAGCTATAAACAGACAACGGGTAAGTGT
CGTAAAGCAGTCAACCGTTGTATGTCATGAAAACCGACAGAGTAGAGGAA
CCTATAAGAAAAACGTTTTGTTTCTATACGTAGCTGTATCTTTTTTCGTC
TTTTGGTTACCGTTTATTTGCTATGAGATAGCTTTCATTATGAATCCAAC
GCGTTTCGATTCTTGTACATACATTACTCAAATCATTCTATCTTGTTTGG
TGTATCTAAACAGTATAGGGAATGTGTTCATTTATGGAGCTTCAAGTAAA
CCTTATAGAAAAGCTTATTGGAGATTCATGGAGAATTTTTGTTGTAAGAT
TTGCAGCGAGAAGTCTTCCACTGTAAACCCAATTGAAGGTGTTTCGTTAT
CTCAAAATAACTTGAGAATTTAaGGACACCATATTACCGATATCATGTTT
TGTTGTTATGTTCATGAGCATCGAACGCTTCTTAGCGATACGTTACCCGT
TCAAGATCCGGCAAATCAAGCGACGCTATATTGTATTGGGATACGTTATG
GCATGGGTTTACACTTTTGGTGCGTCCGTAGTCGGATATCTAACTCACTA
TCCTGGTTGGATCCGAACAATGGTGTTGAATATCAGTAATATTTTACCAC
TATTGATAAATTCTATGGTTTATGTATACATCCAACGTCTTGTATACAAG
CACTCTAAAGCTATAAACAGACAACGGGTAAGTGTCGTAAAGCAGTCAAC
CGTTGTATGTCATGAAAACCGACAGAGTAGAGGAACCTATAAGAAAAACG
TTTTGTTTCTATACGTAGCTGTATCTTTTTTCGTCTTTTGGTTACCGTTT
ATTTGCTATGAGATAGCTTTCATTATGAATCCAACGCGTTTCGATTCTTG
TACATACATTACTCAAATCATTCTATCTTGTTTGGTGTATCTAAACAGTA
TAGGGAATGTGTTCATTTATGGAGCTTCAAGTAAACCTTATAGAAAAGCT
TATTGGAGATTCATGGAGAATTTTTGTTGTAAGATTTGCAGCGAGAAGTC
TTCCACTGTAAACCCAATTGAAGGTGTTTCGTTATCTCAAAATAACTTGA
GAATTTAa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:412037..413655 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 421-1104:936 |
| Aaloc | 1-417:1 |
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