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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000048_pilon:586316..589301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038631 ID=XLOC_038631|Name=XLOC_038631|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2986bp|location=Sequence derived from alignment at sc0000048_pilon:586316..589301- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTTCAAAGCCAATCAGTGTTCGCGTCACCACTATGGACGCCGAACT
GGAGTTTGCCATCCAACCCAGTACCTCTGGTAAACAACTCTTCGATCAAG
TCGTCAAAACTATTGGTTTGAGAGAAATCTGGTTTTTCGGTCTGCAATAT
GTCGATACAAAAGGTGATACAACGTGGTTAAAATTAAACAAAAAAGTGAC
GTCACAAGATATCAAAAAGGAAACACCATACCAATTTAAATTCCGCTCCA
AATTTTTCCCTGAAGATGTCGCAAATGAATTAATTCAAGAAGTCACACGA
AAACTTATTTATTACCAAGTTAAAGACTCTATACTAACTGAAGAGGTGTA
CTGTCCGCCTGAAACTTCAGTTCTTTTATCCTCGTACGCTATGCAAGTCA
AATATGGAGATTATAAACCTGAAACACACACCCAAGGATTTTTATCGAAG
GATCGTTTATTGCCACAAAGAGTATTGAACCAGCACAAAATGAGCCATTC
TCAATGGGAAGAACGTATTGTCAACTGGTGGGCTGAACACAAAGAAATGC
TCAGGTACATTGATTGATTGACTGATTGATCGATTTACTGATTAGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGATTGATTGAGAGCTGATTCGTGAGTACTGTCCAAAAATA
ATTCACACAATAACCTGCAACAGCTGAAACTTTATTCTAAATTCGACACT
CATCAATTTTATTTTTTCTGAATGAGTTTGTCGAATTGTCATATAAAATT
TATAATCTGTTATAGTTTGCATTCCAACTTTTCTTTCTCATCAAAATACT
TGATTTTCAGGGACGATGCTGTACTTGAATACCTCAAAATCGCACAAGAT
TTGGAAATGTACGGAGTCAATTATTTCGAAATCAAAAACAAGAAAGGAAC
CAAACTATTCCTTGGCGTTGACGCATTGGGATTGAATATTTACGAACAAA
GTGACAAATTGACTCCCAAAATTGGTTTCCCATGGAGTGAAATCCGTAAC
ATTTCTTTCAACGATAAAAAATTCGTTATCAAACCCATTGATAAGAAGGC
GCCTGTAAGTTTTACTGTATTTCCTTTTGAAGTTAGGTATACAAAATTTT
GAAAATCTTTGATTTCGTCTGAAATGAAAATTCGAACACTCAAAGTTATC
AGCTCTTAATTTTACAGCGTCTTTAAAAAAATAACTACTGAAACATGGGG
GCACGTTCTCCGGTGTCACTTTTTTTGCATTTTAGTTCATCTAACAACTC
TTGAAAAAGTTTCTGGTTGATTTCTAACAAATTGCGTGGATCAGTCAGAA
AACTGCCAATTAATAGGTATAGCGACTTCAAATTCAATATATGTTTTATT
AGGAATTTGTATTTTACGTCGACCGATTACGAATCAATAAGCGAATCTTG
TCGTTGAGCATGGGTAATCACGAATTATACATGAGACGACGAAAACCCGA
CACCATCGAAGTCCAACAGATGAAAGCACAAGCACGCGAAGAGAAATTGG
CTAAACAACAAGAAAGAGCTCGATTGACGCGCGAGAAACAGGCCCGTGAA
GATGCCGAACGTGAAAAGCTCGAAATGGCCGATCGTCTGAGAAAATTCGA
AGAGGAAGCTAAAGTCGCTCAACAAGCGCTTGACCAAGCTAAAGAGGACG
CCATCCGAAAAGAGGGATTAAGAAAAAGAGCTGAGGAAGAGGCTGCCCGT
CTTGAAGAATTGAAGAGACAAGCTGAAATCGAACGACAGAAATTGGAAGA
GGAAGCGGCCTCTCAGAGAATCGCTAAAGAAGAATACGAACAACGCGCCG
CAGCCGCCGCCGAAGAAGCTGAACGCCGCGCGGTCGAGATCGAAGAGAAG
CAAAGAGAAGCAGAGAGATTACAACAAGAATTGGCTGAATCTCAACGTCG
TGAAGATGAACAGAAACAGGTAAGGGAACAAAAAGTCTTTTATTTTAGTC
TTGCCCTATTCTTTACCGTCAACCTGTTTGGGAAGATCTTTGTTTGTCAC
CGCATTCTGCAAGTCTATTTTTTGAGAAAGAGTTGATATAAGAAGTTTTG
ATCAATTTTTGAAAATTTCTTGTCGTCAATGTTTTAGTTGTTGTTTTTTA
ATTCTAAGCAAGCTTTCTTTTACTTTCCATCCTTGCGTAGGAATTATTGA
AGATCATTTCGACACCACCTACCATCATGGTACAAACAGATGAGGCTGAA
GAAACCTCCAATGAACACGGTGCTGATCTGGAAGAAGCTGAAATGGACAA
TCGTGAATTGGAATACACTTCGGAACAAGACAAGAATGAACGGCTCAAGA
ACCAATTGGCTGTAAGTGATGTTGTTTGTCAATATATTTTGCGTGTTTGC
TTTTCCCTGTCTCAAAGCAGTGCCACAGCGCGCAATGCATTATTCATGAA
GCAATTAATTCTATGGAAATGCCCGGGGTTTTGGCAGTAGTGGCAAATTG
AAGCTGTAGAAAAATTGTTTAGAATTTGACATTACTGAATCAGAGTTCAC
CACCAGGAACTTAATGGTTCCTCAGAAAAACTCTAATATAAGGCTTAATT
TTCCGAGTATTTTATCTGGATTTTCGACTTCAACATTTTTCCATACATAT
GTCGGCAGTCATATTAATCTGAAGCGAATTTTCCTGCGTCTTCTAACCTG
CAAACTTTAACTGTTGACTGAAGGTTCCTGACCATCAATGTTTATTCGTT
ATTGCTTTATTATCTTTACAGAGCCTGAGTGACGAATTGAATCAAGCTCG
TGATTCAGCTCAATTAACACATGAAGATTTGTTGCACGAAGGGAACTTGA
AAGAAGGTCGTGATAAATACAAAACACTTCGACAAATCCGACAAGGAAAC
ACAAGACAACGTATTGATGAATTCGAATCTTTGTAA Coding sequence (CDS) from alignment at sc0000048_pilon:586316..589301- >XLOC_038631 ID=XLOC_038631|Name=XLOC_038631|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3402bp|location=Sequence derived from alignment at sc0000048_pilon:586316..589301- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTTCAAAGCCAATCAGTGTTCGCGTCACCACTATGGACGCCGAACT
GGAGTTTGCCATCCAACCCAGTACCTCTGGTAAACAACTCTTCGATCAAG
TCGTCAAAACTATTGGTTTGAGAGAAATCTGGTTTTTCGGTCTGCAATAT
GTCGATACAAAAGGTGATACAACGTGGTTAAAATTAAACAAAAAAGTGAC
GTCACAAGATATCAAAAAGGAAACACCATACCAATTTAAATTCCGCTCCA
AATTTTTCCCTGAAGATGTCGCAAATGAATTAATTCAAGAAGTCACACGA
AAACTTATTTATTACCAAGTTAAAGACTCTATACTAACTGAAGAGGTGTA
CTGTCCGCCTGAAACTTCAGTTCTTTTATCCTCGTACGCTATGCAAGTCA
AATATGGAGATTATAAACCTGAAACACACACCCAAGGATTTTTATCGAAG
GATCGTTTATTGCCACAAAGAGTATTGAACCAGCACAAAATGAGCCATTC
TCAATGGGAAGAACGTATTGTCAACTGGTGGGCTGAACACAAAGAAATGC
TCAGATGCCTTCAAAGCCAATCAGTGTTCGCGTCACCACTATGGACGCCG
AACTGGAGTTTGCCATCCAACCCAGTACCTCTGGTAAACAACTCTTCGAT
CAAGTCGTCAAAACTATTGGTTTGAGAGAAATCTGGTTTTTCGGTCTGCA
ATATGTCGATACAAAAGGTGATACAACGTGGTTAAAATTAAACAAAAAAG
TGACGTCACAAGATATCAAAAAGGAAACACCATACCAATTTAAATTCCGC
TCCAAATTTTTCCCTGAAGATGTCGCAAATGAATTAATTCAAGAAGTCAC
ACGAAAACTTATTTATTACCAAGTTAAAGACTCTATACTAACTGAAGAGG
TGTACTGTCCGCCTGAAACTTCAGTTCTTTTATCCTCGTACGCTATGCAA
GTCAAATATGGAGATTATAAACCTGAAACACACACCCAAGGATTTTTATC
GAAGGATCGTTTATTGCCACAAAGAGTATTGAACCAGCACAAAATGAGCC
ATTCTCAATGGGAAGAACGTATTGTCAACTGGTGGGCTGAACACAAAGAA
ATGCTCAGGGACGATGCTGTACTTGAATACCTCAAAATCGCACAAGATTT
GGAAATGTACGGAGTCAATTATTTCGAAATCAAAAACAAGAAAGGAACCA
AACTATTCCTTGGCGTTGACGCATTGGGATTGAATATTTACGAACAAAGT
GACAAATTGACTCCCAAAATTGGTTTCCCATGGAGTGAAATCCGTAACAT
TTCTTTCAACGATAAAAAATTCGTTATCAAACCCATTGATAAGAAGGCGC
CTGGACGATGCTGTACTTGAATACCTCAAAATCGCACAAGATTTGGAAAT
GTACGGAGTCAATTATTTCGAAATCAAAAACAAGAAAGGAACCAAACTAT
TCCTTGGCGTTGACGCATTGGGATTGAATATTTACGAACAAAGTGACAAA
TTGACTCCCAAAATTGGTTTCCCATGGAGTGAAATCCGTAACATTTCTTT
CAACGATAAAAAATTCGTTATCAAACCCATTGATAAGAAGGCGCCTGAAT
TTGTATTTTACGTCGACCGATTACGAATCAATAAGCGAATCTTGTCGTTG
AGCATGGGTAATCACGAATTATACATGAGACGACGAAAACCCGACACCAT
CGAAGTCCAACAGATGAAAGCACAAGCACGCGAAGAGAAATTGGCTAAAC
AACAAGAAAGAGCTCGATTGACGCGCGAGAAACAGGCCCGTGAAGATGCC
GAACGTGAAAAGCTCGAAATGGCCGATCGTCTGAGAAAATTCGAAGAGGA
AGCTAAAGTCGCTCAACAAGCGCTTGACCAAGCTAAAGAGGACGCCATCC
GAAAAGAGGGATTAAGAAAAAGAGCTGAGGAAGAGGCTGCCCGTCTTGAA
GAATTGAAGAGACAAGCTGAAATCGAACGACAGAAATTGGAAGAGGAAGC
GGCCTCTCAGAGAATCGCTAAAGAAGAATACGAACAACGCGCCGCAGCCG
CCGCCGAAGAAGCTGAACGCCGCGCGGTCGAGATCGAAGAGAAGCAAAGA
GAAGCAGAGAGATTACAACAAGAATTGGCTGAATCTCAACGTCGTGAAGA
TGAACAGAAACAGGAATTTGTATTTTACGTCGACCGATTACGAATCAATA
AGCGAATCTTGTCGTTGAGCATGGGTAATCACGAATTATACATGAGACGA
CGAAAACCCGACACCATCGAAGTCCAACAGATGAAAGCACAAGCACGCGA
AGAGAAATTGGCTAAACAACAAGAAAGAGCTCGATTGACGCGCGAGAAAC
AGGCCCGTGAAGATGCCGAACGTGAAAAGCTCGAAATGGCCGATCGTCTG
AGAAAATTCGAAGAGGAAGCTAAAGTCGCTCAACAAGCGCTTGACCAAGC
TAAAGAGGACGCCATCCGAAAAGAGGGATTAAGAAAAAGAGCTGAGGAAG
AGGCTGCCCGTCTTGAAGAATTGAAGAGACAAGCTGAAATCGAACGACAG
AAATTGGAAGAGGAAGCGGCCTCTCAGAGAATCGCTAAAGAAGAATACGA
ACAACGCGCCGCAGCCGCCGCCGAAGAAGCTGAACGCCGCGCGGTCGAGA
TCGAAGAGAAGCAAAGAGAAGCAGAGAGATTACAACAAGAATTGGCTGAA
TCTCAACGTCGTGAAGATGAACAGAAACAGGAATTATTGAAGATCATTTC
GACACCACCTACCATCATGGTACAAACAGATGAGGCTGAAGAAACCTCCA
ATGAACACGGTGCTGATCTGGAAGAAGCTGAAATGGACAATCGTGAATTG
GAATACACTTCGGAACAAGACAAGAATGAACGGCTCAAGAACCAATTGGC
TGAATTATTGAAGATCATTTCGACACCACCTACCATCATGGTACAAACAG
ATGAGGCTGAAGAAACCTCCAATGAACACGGTGCTGATCTGGAAGAAGCT
GAAATGGACAATCGTGAATTGGAATACACTTCGGAACAAGACAAGAATGA
ACGGCTCAAGAACCAATTGGCTAGCCTGAGTGACGAATTGAATCAAGCTC
GTGATTCAGCTCAATTAACACATGAAGATTTGTTGCACGAAGGGAACTTG
AAAGAAGGTCGTGATAAATACAAAACACTTCGACAAATCCGACAAGGAAA
CACAAGACAACGTATTGATGAATTCGAATCTTTGTAAAGCCTGAGTGACG
AATTGAATCAAGCTCGTGATTCAGCTCAATTAACACATGAAGATTTGTTG
CACGAAGGGAACTTGAAAGAAGGTCGTGATAAATACAAAACACTTCGACA
AATCCGACAAGGAAACACAAGACAACGTATTGATGAATTCGAATCTTTGT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048_pilon | genome | sc0000048_pilon:586316..589301 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1537-1701:166 |
| Aaloc | 1366-1536:747 |
| Aaloc | 799-1365:1535 |
| Aaloc | 556-798:2076 |
| Aaloc | 1-552:2987 |
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